RNA–Protein interactions for RNA: ENST00000553055.1

PFKM-231, Transcript of phosphofructokinase, muscle, human

TSL 5

Gene PFKM, Length 289 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-231	ENST00000553055	METTL3	Q86U44	580 aa	Known RBP	10.82	□□□□□ -0.68
PFKM-231	ENST00000553055	MICALL2	Q8IY33	904 aa		10.82	□□□□□ -0.68
PFKM-231	ENST00000553055	SREK1	Q8WXA9	508 aa	Known RBP	10.82	□□□□□ -0.68
PFKM-231	ENST00000553055	SIRT1	Q96EB6	747 aa		10.82	□□□□□ -0.68
PFKM-231	ENST00000553055	AP1G2	O75843	785 aa		10.81	□□□□□ -0.68
PFKM-231	ENST00000553055	FBXO31	Q5XUX0	539 aa	Predicted RBP	10.81	□□□□□ -0.68
PFKM-231	ENST00000553055	ILDR1	Q86SU0	546 aa	Predicted RBP	10.81	□□□□□ -0.68
PFKM-231	ENST00000553055	TXNDC2	Q86VQ3	553 aa		10.81	□□□□□ -0.68
PFKM-231	ENST00000553055	C8orf37	Q96NL8	207 aa		10.81	□□□□□ -0.68
PFKM-231	ENST00000553055	USP17L8	P0C7I0	530 aa		10.79	□□□□□ -0.68
PFKM-231	ENST00000553055	ZNF710	Q8N1W2	664 aa		10.79	□□□□□ -0.68
PFKM-231	ENST00000553055	POLR3GL	Q9BT43	218 aa		10.79	□□□□□ -0.68
PFKM-231	ENST00000553055	CDHR5	Q9HBB8	845 aa		10.79	□□□□□ -0.68
PFKM-231	ENST00000553055	NPDC1	Q9NQX5	325 aa	Predicted RBP	10.79	□□□□□ -0.68
PFKM-231	ENST00000553055	SCRIB	Q14160	1630 aa		10.78	□□□□□ -0.68
PFKM-231	ENST00000553055	C2orf72	A6NCS6	295 aa		10.78	□□□□□ -0.68
PFKM-231	ENST00000553055	EVI5	O60447	810 aa		10.78	□□□□□ -0.68
PFKM-231	ENST00000553055	NCL	P19338	710 aa	Known RBP	10.78	□□□□□ -0.68
PFKM-231	ENST00000553055	EN1	Q05925	392 aa	Predicted RBP	10.78	□□□□□ -0.68
PFKM-231	ENST00000553055	TSR1	Q2NL82	804 aa	Known RBP	10.78	□□□□□ -0.68
PFKM-231	ENST00000553055	BCL2L13	Q9BXK5	485 aa		10.78	□□□□□ -0.68
PFKM-231	ENST00000553055	MAP3K7	O43318	606 aa		10.77	□□□□□ -0.69
PFKM-231	ENST00000553055	SPATA32	Q96LK8	384 aa		10.77	□□□□□ -0.69
PFKM-231	ENST00000553055	SPTLC1	O15269	473 aa		10.76	□□□□□ -0.69
PFKM-231	ENST00000553055	ZNF16	P17020	682 aa	Predicted RBP	10.76	□□□□□ -0.69
PFKM-231	ENST00000553055	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	10.75	□□□□□ -0.69
PFKM-231	ENST00000553055	EPAS1	Q99814	870 aa		10.75	□□□□□ -0.69
PFKM-231	ENST00000553055	SOX11	P35716	441 aa		10.74	□□□□□ -0.69
PFKM-231	ENST00000553055	SPIRE2	Q8WWL2	714 aa		10.74	□□□□□ -0.69
PFKM-231	ENST00000553055	TFIP11	Q9UBB9	837 aa	Known RBP	10.74	□□□□□ -0.69
PFKM-231	ENST00000553055	KIF3C	O14782	793 aa		10.73	□□□□□ -0.69
PFKM-231	ENST00000553055	SMARCA5	O60264	1052 aa	Predicted RBP	10.73	□□□□□ -0.69
PFKM-231	ENST00000553055	CSPP1	Q1MSJ5	1256 aa		10.73	□□□□□ -0.69
PFKM-231	ENST00000553055	RSBN1L	Q6PCB5	846 aa	Predicted RBP	10.73	□□□□□ -0.69
PFKM-231	ENST00000553055	PXYLP1	Q8TE99	480 aa		10.73	□□□□□ -0.69
PFKM-231	ENST00000553055	NLRP7	Q8WX94	980 aa		10.73	□□□□□ -0.69
PFKM-231	ENST00000553055	GJA5	P36382	358 aa		10.72	□□□□□ -0.69
PFKM-231	ENST00000553055	ALG2	Q9H553	416 aa		10.72	□□□□□ -0.69
PFKM-231	ENST00000553055	ZC3H6	P61129	1189 aa	Known RBP	10.71	□□□□□ -0.69
PFKM-231	ENST00000553055	VAC14	Q08AM6	782 aa		10.71	□□□□□ -0.69
PFKM-231	ENST00000553055	SF3A1	Q15459	793 aa	Known RBP	10.71	□□□□□ -0.69
PFKM-231	ENST00000553055	CDCA8	Q53HL2	280 aa		10.71	□□□□□ -0.69
PFKM-231	ENST00000553055	THOC2	Q8NI27	1593 aa	Known RBP	10.71	□□□□□ -0.69
PFKM-231	ENST00000553055	GIPC2	Q8TF65	315 aa		10.71	□□□□□ -0.69
PFKM-231	ENST00000553055	UBXN4	Q92575	508 aa		10.71	□□□□□ -0.69
PFKM-231	ENST00000553055	GJD4	Q96KN9	370 aa	Predicted RBP	10.71	□□□□□ -0.69
PFKM-231	ENST00000553055	NUTM2B	A6NNL0	878 aa	Predicted RBP	10.7	□□□□□ -0.7
PFKM-231	ENST00000553055	NUTM2E	B1AL46	878 aa	Predicted RBP	10.7	□□□□□ -0.7
PFKM-231	ENST00000553055	LILRB3	O75022	631 aa		10.7	□□□□□ -0.7
PFKM-231	ENST00000553055	PRKAR2A	P13861	404 aa	Known RBP	10.7	□□□□□ -0.7
PFKM-231	ENST00000553055	NUTM2D	Q5VT03	806 aa	Predicted RBP	10.7	□□□□□ -0.7
PFKM-231	ENST00000553055	NUTM1	Q86Y26	1132 aa		10.7	□□□□□ -0.7
PFKM-231	ENST00000553055	NUTM2A	Q8IVF1	878 aa	Predicted RBP	10.7	□□□□□ -0.7
PFKM-231	ENST00000553055	MAFB	Q9Y5Q3	323 aa	Predicted RBP	10.7	□□□□□ -0.7
PFKM-231	ENST00000553055		G3V3G9	751 aa		10.69	□□□□□ -0.7
PFKM-231	ENST00000553055	PHF14	O94880	888 aa		10.69	□□□□□ -0.7
PFKM-231	ENST00000553055	ARID4A	P29374	1257 aa	Predicted RBP	10.69	□□□□□ -0.7
PFKM-231	ENST00000553055	ZNF326	Q5BKZ1	582 aa	Known RBP	10.69	□□□□□ -0.7
PFKM-231	ENST00000553055	ANKRD13A	Q8IZ07	590 aa		10.69	□□□□□ -0.7
PFKM-231	ENST00000553055	BCL11A	Q9H165	835 aa		10.69	□□□□□ -0.7
PFKM-231	ENST00000553055	NES	P48681	1621 aa		10.69	□□□□□ -0.7
PFKM-231	ENST00000553055	ELOA	Q14241	798 aa	Known RBP	10.68	□□□□□ -0.7
PFKM-231	ENST00000553055	L3MBTL3	Q96JM7	780 aa	Predicted RBP	10.68	□□□□□ -0.7
PFKM-231	ENST00000553055	UCN2	Q96RP3	112 aa		10.68	□□□□□ -0.7
PFKM-231	ENST00000553055	QPCT	Q16769	361 aa		10.67	□□□□□ -0.7
PFKM-231	ENST00000553055	FAM161A	Q3B820	660 aa		10.67	□□□□□ -0.7
PFKM-231	ENST00000553055	ADGRG1	Q9Y653	693 aa		10.67	□□□□□ -0.7
PFKM-231	ENST00000553055	VAMP1	P23763	118 aa		10.66	□□□□□ -0.7
PFKM-231	ENST00000553055	CERK	Q8TCT0	537 aa		10.66	□□□□□ -0.7
PFKM-231	ENST00000553055	MARS	P56192	900 aa	Known RBP	10.65	□□□□□ -0.7
PFKM-231	ENST00000553055	SEMA3F	Q13275	785 aa		10.65	□□□□□ -0.7
PFKM-231	ENST00000553055	PRPF38B	Q5VTL8	546 aa	Known RBP	10.65	□□□□□ -0.7
PFKM-231	ENST00000553055	DPY19L2	Q6NUT2	758 aa		10.65	□□□□□ -0.7
PFKM-231	ENST00000553055	RTL5	Q5HYW3	569 aa	Predicted RBP	10.64	□□□□□ -0.71
PFKM-231	ENST00000553055	RBM33	Q96EV2	1170 aa	Known RBP	10.64	□□□□□ -0.71
PFKM-231	ENST00000553055	ZRANB1	Q9UGI0	708 aa		10.64	□□□□□ -0.71
PFKM-231	ENST00000553055	SULF1	Q8IWU6	871 aa		10.63	□□□□□ -0.71
PFKM-231	ENST00000553055	MOXD2P	A6NHM9	499 aa		10.62	□□□□□ -0.71
PFKM-231	ENST00000553055	SOWAHD	A6NJG2	315 aa		10.62	□□□□□ -0.71
PFKM-231	ENST00000553055	ATP9B	O43861	1147 aa		10.62	□□□□□ -0.71
PFKM-231	ENST00000553055	TIE1	P35590	1138 aa		10.62	□□□□□ -0.71
PFKM-231	ENST00000553055	TMEM164	Q5U3C3	297 aa		10.62	□□□□□ -0.71
PFKM-231	ENST00000553055	PADI6	Q6TGC4	694 aa		10.62	□□□□□ -0.71
PFKM-231	ENST00000553055	RBM46	Q8TBY0	533 aa	Known RBP	10.62	□□□□□ -0.71
PFKM-231	ENST00000553055	PPP1R1B	Q9UD71	204 aa	Predicted RBP	10.62	□□□□□ -0.71
PFKM-231	ENST00000553055	CD46	P15529	392 aa		10.61	□□□□□ -0.71
PFKM-231	ENST00000553055	SLAIN1	Q8ND83	568 aa		10.61	□□□□□ -0.71
PFKM-231	ENST00000553055	PRR7	Q8TB68	274 aa		10.61	□□□□□ -0.71
PFKM-231	ENST00000553055	PHF12	Q96QT6	1004 aa		10.61	□□□□□ -0.71
PFKM-231	ENST00000553055	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	10.61	□□□□□ -0.71
PFKM-231	ENST00000553055	ZBTB3	Q9H5J0	574 aa		10.61	□□□□□ -0.71
PFKM-231	ENST00000553055	RBM27	Q9P2N5	1060 aa	Known RBP	10.61	□□□□□ -0.71
PFKM-231	ENST00000553055	BOLA1	Q9Y3E2	137 aa		10.61	□□□□□ -0.71
PFKM-231	ENST00000553055	NCAPD3	P42695	1498 aa		10.61	□□□□□ -0.71
PFKM-231	ENST00000553055	ANO8	Q9HCE9	1232 aa	Predicted RBP	10.6	□□□□□ -0.71
PFKM-231	ENST00000553055	CWC22	Q9HCG8	908 aa	Known RBP	10.6	□□□□□ -0.71
PFKM-231	ENST00000553055	CADPS	Q9ULU8	1353 aa		10.6	□□□□□ -0.71
PFKM-231	ENST00000553055	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	10.59	□□□□□ -0.71
PFKM-231	ENST00000553055	NAALADL2	Q58DX5	795 aa		10.59	□□□□□ -0.71
PFKM-231	ENST00000553055	TYW1B	Q6NUM6	668 aa		10.59	□□□□□ -0.71

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