RNA–Protein interactions for RNA: ENST00000553029.1

LINC02406-201, Transcript of long intergenic non-protein coding RNA 2406, humanhuman

TSL 3 BASIC

Gene LINC02406, Length 546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02406-201ENST00000553029 ABCC3O15438 1527 aa10.37□□□□□ -0.75
LINC02406-201ENST00000553029 SLIT1O75093 1534 aa10.37□□□□□ -0.75
LINC02406-201ENST00000553029 CCDC125Q86Z20 511 aa10.36□□□□□ -0.75
LINC02406-201ENST00000553029 GPATCH8Q9UKJ3 1502 aaKnown RBP10.36□□□□□ -0.75
LINC02406-201ENST00000553029 RTEL1-TNFRSF6BF6WH68 1400 aa10.35□□□□□ -0.75
LINC02406-201ENST00000553029 EHMT2Q96KQ7 1210 aa10.35□□□□□ -0.75
LINC02406-201ENST00000553029 CFDP1Q9UEE9 299 aaPredicted RBP10.35□□□□□ -0.75
LINC02406-201ENST00000553029 LRP5O75197 1615 aa10.35□□□□□ -0.75
LINC02406-201ENST00000553029 ERVK-7P63135 1459 aa10.35□□□□□ -0.75
LINC02406-201ENST00000553029 SHPRHQ149N8 1683 aa10.34□□□□□ -0.75
LINC02406-201ENST00000553029 AHDC1Q5TGY3 1603 aaPredicted RBP10.34□□□□□ -0.75
LINC02406-201ENST00000553029 CDC42BPAQ5VT25 1732 aa10.34□□□□□ -0.75
LINC02406-201ENST00000553029 C8orf37Q96NL8 207 aa10.34□□□□□ -0.75
LINC02406-201ENST00000553029 YY1P25490 414 aa10.33□□□□□ -0.76
LINC02406-201ENST00000553029 MKRN4PQ13434 485 aaPredicted RBP10.33□□□□□ -0.76
LINC02406-201ENST00000553029 POTEHQ6S545 545 aa10.33□□□□□ -0.76
LINC02406-201ENST00000553029 CCDC18Q5T9S5 1454 aa10.33□□□□□ -0.76
LINC02406-201ENST00000553029 NWD1Q149M9 1564 aa10.33□□□□□ -0.76
LINC02406-201ENST00000553029 ARHGAP35Q9NRY4 1499 aa10.32□□□□□ -0.76
LINC02406-201ENST00000553029 UBR1Q8IWV7 1749 aa10.3□□□□□ -0.76
LINC02406-201ENST00000553029 TMEM2Q9UHN6 1383 aa10.3□□□□□ -0.76
LINC02406-201ENST00000553029 AKT1S1Q96B36 256 aa10.3□□□□□ -0.76
LINC02406-201ENST00000553029 SLC26A8Q96RN1 970 aa10.3□□□□□ -0.76
LINC02406-201ENST00000553029 DIP2AQ14689 1571 aa10.29□□□□□ -0.76
LINC02406-201ENST00000553029 MBD5Q9P267 1494 aa10.29□□□□□ -0.76
LINC02406-201ENST00000553029 EP400Q96L91 3159 aa10.28□□□□□ -0.76
LINC02406-201ENST00000553029 CCNB3Q8WWL7 1395 aa10.28□□□□□ -0.76
LINC02406-201ENST00000553029 EEA1Q15075 1411 aa10.28□□□□□ -0.76
LINC02406-201ENST00000553029 CADPS2Q86UW7 1296 aa10.28□□□□□ -0.76
LINC02406-201ENST00000553029 SETD5Q9C0A6 1442 aa10.27□□□□□ -0.77
LINC02406-201ENST00000553029 NHSL1Q5SYE7 1610 aa10.27□□□□□ -0.77
LINC02406-201ENST00000553029 C14orf37Q86TY3 774 aa10.27□□□□□ -0.77
LINC02406-201ENST00000553029 CAMSAP2Q08AD1 1489 aa10.27□□□□□ -0.77
LINC02406-201ENST00000553029 KDM5AP29375 1690 aaKnown RBP10.27□□□□□ -0.77
LINC02406-201ENST00000553029 BLMP54132 1417 aaPredicted RBP10.26□□□□□ -0.77
LINC02406-201ENST00000553029 NCOA3Q9Y6Q9 1424 aa10.26□□□□□ -0.77
LINC02406-201ENST00000553029 TRPC5Q9UL62 973 aaPredicted RBP10.26□□□□□ -0.77
LINC02406-201ENST00000553029 LRRIQ1Q96JM4 1722 aa10.26□□□□□ -0.77
LINC02406-201ENST00000553029 ZNF644Q9H582 1327 aaPredicted RBP10.26□□□□□ -0.77
LINC02406-201ENST00000553029 CASKIN1Q8WXD9 1431 aa10.25□□□□□ -0.77
LINC02406-201ENST00000553029 ATF3P18847 181 aa10.25□□□□□ -0.77
LINC02406-201ENST00000553029 BRINP3Q76B58 766 aa10.25□□□□□ -0.77
LINC02406-201ENST00000553029 STAG3Q9UJ98 1225 aa10.25□□□□□ -0.77
LINC02406-201ENST00000553029 TET3O43151 1660 aa10.25□□□□□ -0.77
LINC02406-201ENST00000553029 HRCP23327 699 aa10.24□□□□□ -0.77
LINC02406-201ENST00000553029 DEFB132Q7Z7B7 95 aa10.24□□□□□ -0.77
LINC02406-201ENST00000553029 USP21Q9UK80 565 aa10.24□□□□□ -0.77
LINC02406-201ENST00000553029 MAST1Q9Y2H9 1570 aa10.23□□□□□ -0.77
LINC02406-201ENST00000553029 SENP3-EIF4A1A0A087X0R7 540 aa10.23□□□□□ -0.77
LINC02406-201ENST00000553029 PSDA5PKW4 1024 aaPredicted RBP10.23□□□□□ -0.77
LINC02406-201ENST00000553029 ADAMTS2O95450 1211 aa10.23□□□□□ -0.77
LINC02406-201ENST00000553029 LRRC59Q96AG4 307 aaKnown RBP10.23□□□□□ -0.77
LINC02406-201ENST00000553029 PNPLA6Q8IY17 1366 aa10.23□□□□□ -0.77
LINC02406-201ENST00000553029 CCDC141Q6ZP82 1450 aa10.23□□□□□ -0.77
LINC02406-201ENST00000553029 SF3B2Q13435 895 aaKnown RBP10.22□□□□□ -0.77
LINC02406-201ENST00000553029 BCANQ96GW7 911 aa10.22□□□□□ -0.77
LINC02406-201ENST00000553029 C19orf44Q9H6X5 657 aa10.22□□□□□ -0.77
LINC02406-201ENST00000553029 CHRDL2Q6WN34 429 aa10.21□□□□□ -0.77
LINC02406-201ENST00000553029 REM2Q8IYK8 340 aaPredicted RBP10.21□□□□□ -0.77
LINC02406-201ENST00000553029 ATRNO75882 1429 aa10.21□□□□□ -0.78
LINC02406-201ENST00000553029 BCL9LQ86UU0 1499 aa10.21□□□□□ -0.78
LINC02406-201ENST00000553029 EFCAB6Q5THR3 1501 aa10.21□□□□□ -0.78
LINC02406-201ENST00000553029 UBTFP17480 764 aaKnown RBP10.2□□□□□ -0.78
LINC02406-201ENST00000553029 ASXL1Q8IXJ9 1541 aa10.2□□□□□ -0.78
LINC02406-201ENST00000553029 MROH1Q8NDA8 1641 aa10.19□□□□□ -0.78
LINC02406-201ENST00000553029 SPDYE2BA6NHP3 402 aa10.19□□□□□ -0.78
LINC02406-201ENST00000553029 SPDYE6P0CI01 402 aa10.19□□□□□ -0.78
LINC02406-201ENST00000553029 SPDYE2Q495Y8 402 aa10.19□□□□□ -0.78
LINC02406-201ENST00000553029 FNBP4Q8N3X1 1017 aaPredicted RBP10.19□□□□□ -0.78
LINC02406-201ENST00000553029 ARHGAP31Q2M1Z3 1444 aa10.18□□□□□ -0.78
LINC02406-201ENST00000553029 PIK3C2BO00750 1634 aa10.18□□□□□ -0.78
LINC02406-201ENST00000553029 RSPH4AQ5TD94 716 aa10.17□□□□□ -0.78
LINC02406-201ENST00000553029 FYCO1Q9BQS8 1478 aa10.17□□□□□ -0.78
LINC02406-201ENST00000553029 DCCP43146 1447 aa10.16□□□□□ -0.78
LINC02406-201ENST00000553029 PTCH1Q13635 1447 aa10.16□□□□□ -0.78
LINC02406-201ENST00000553029 MTUS2Q5JR59 1369 aa10.14□□□□□ -0.79
LINC02406-201ENST00000553029 PLEKHG1Q9ULL1 1385 aa10.14□□□□□ -0.79
LINC02406-201ENST00000553029 TSPY4P0CV99 314 aa10.14□□□□□ -0.79
LINC02406-201ENST00000553029 TSPY10P0CW01 314 aa10.14□□□□□ -0.79
LINC02406-201ENST00000553029 IDI1Q13907 227 aa10.14□□□□□ -0.79
LINC02406-201ENST00000553029 GJD4Q96KN9 370 aaPredicted RBP10.14□□□□□ -0.79
LINC02406-201ENST00000553029 SSUH2Q9Y2M2 353 aa10.14□□□□□ -0.79
LINC02406-201ENST00000553029 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.13□□□□□ -0.79
LINC02406-201ENST00000553029 BAG6P46379 1132 aa10.13□□□□□ -0.79
LINC02406-201ENST00000553029 UNC13BO14795 1591 aa10.13□□□□□ -0.79
LINC02406-201ENST00000553029 PPP1R15AO75807 674 aaPredicted RBP10.12□□□□□ -0.79
LINC02406-201ENST00000553029 DDX17Q92841 729 aaKnown RBP10.12□□□□□ -0.79
LINC02406-201ENST00000553029 TBX22Q9Y458 520 aa10.12□□□□□ -0.79
LINC02406-201ENST00000553029 MST1RQ04912 1400 aa10.12□□□□□ -0.79
LINC02406-201ENST00000553029 ADGRB3O60242 1522 aa10.12□□□□□ -0.79
LINC02406-201ENST00000553029 EIF2AK4Q9P2K8 1649 aaKnown RBP10.11□□□□□ -0.79
LINC02406-201ENST00000553029 PITPNM1O00562 1244 aa10.11□□□□□ -0.79
LINC02406-201ENST00000553029 C1QTNF8P60827 252 aa10.11□□□□□ -0.79
LINC02406-201ENST00000553029 R3HDM1Q15032 1099 aaKnown RBP10.11□□□□□ -0.79
LINC02406-201ENST00000553029 ZNF784Q8NCA9 323 aaPredicted RBP10.1□□□□□ -0.79
LINC02406-201ENST00000553029 CEP152O94986 1710 aa10.1□□□□□ -0.79
LINC02406-201ENST00000553029 PIK3R4Q99570 1358 aa10.09□□□□□ -0.79
LINC02406-201ENST00000553029 ZFYVE9O95405 1425 aa10.08□□□□□ -0.8
LINC02406-201ENST00000553029 CHD2O14647 1828 aaKnown RBP10.08□□□□□ -0.8
LINC02406-201ENST00000553029 HDGFP51858 240 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms