RNA–Protein interactions for RNA: ENST00000552770.2

CEP290-206, Transcript of centrosomal protein 290, humanhuman

TSL 3

Gene CEP290, Length 1,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-206ENST00000552770 TMEM134Q9H6X4 195 aa11.73□□□□□ -0.53
CEP290-206ENST00000552770 PCDHB3Q9Y5E6 796 aa11.73□□□□□ -0.53
CEP290-206ENST00000552770 NUTM2FA1L443 756 aa11.72□□□□□ -0.53
CEP290-206ENST00000552770 RCCD1A6NED2 376 aa11.71□□□□□ -0.53
CEP290-206ENST00000552770 SEMA3EO15041 775 aa11.71□□□□□ -0.53
CEP290-206ENST00000552770 HAP1P54257 671 aaPredicted RBP11.71□□□□□ -0.53
CEP290-206ENST00000552770 NECTIN2Q92692 538 aa11.71□□□□□ -0.53
CEP290-206ENST00000552770 RNF223E7ERA6 249 aa11.69□□□□□ -0.54
CEP290-206ENST00000552770 SLC10A3P09131 477 aa11.69□□□□□ -0.54
CEP290-206ENST00000552770 TRIM67Q6ZTA4 783 aa11.68□□□□□ -0.54
CEP290-206ENST00000552770 RBM46Q8TBY0 533 aaKnown RBP11.68□□□□□ -0.54
CEP290-206ENST00000552770 PDZRN3Q9UPQ7 1066 aa11.68□□□□□ -0.54
CEP290-206ENST00000552770 PPEF1O14829 653 aaPredicted RBP11.66□□□□□ -0.54
CEP290-206ENST00000552770 CFHP08603 1231 aa11.66□□□□□ -0.54
CEP290-206ENST00000552770 SLC4A3P48751 1232 aa11.66□□□□□ -0.54
CEP290-206ENST00000552770 GGCXP38435 758 aa11.65□□□□□ -0.54
CEP290-206ENST00000552770 TMUB1Q9BVT8 246 aa11.65□□□□□ -0.54
CEP290-206ENST00000552770 ACTN4O43707 911 aaKnown RBP11.64□□□□□ -0.55
CEP290-206ENST00000552770 PRR14Q9BWN1 585 aa11.64□□□□□ -0.55
CEP290-206ENST00000552770 S1PR4O95977 384 aa11.63□□□□□ -0.55
CEP290-206ENST00000552770 FCHSD2O94868 740 aa11.62□□□□□ -0.55
CEP290-206ENST00000552770 PXYLP1Q8TE99 480 aa11.62□□□□□ -0.55
CEP290-206ENST00000552770 FECHP22830 423 aa11.61□□□□□ -0.55
CEP290-206ENST00000552770 SLC19A1P41440 591 aa11.6□□□□□ -0.55
CEP290-206ENST00000552770 KMT5BQ4FZB7 885 aa11.59□□□□□ -0.55
CEP290-206ENST00000552770 RBM26Q5T8P6 1007 aaKnown RBP11.59□□□□□ -0.55
CEP290-206ENST00000552770 LIAT1Q6ZQX7 453 aa11.59□□□□□ -0.55
CEP290-206ENST00000552770 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.58□□□□□ -0.56
CEP290-206ENST00000552770 PLA2G2CQ5R387 149 aa11.58□□□□□ -0.56
CEP290-206ENST00000552770 GPR37O15354 613 aa11.57□□□□□ -0.56
CEP290-206ENST00000552770 PUS10Q3MIT2 529 aaKnown RBP11.57□□□□□ -0.56
CEP290-206ENST00000552770 P3H3Q8IVL6 736 aa11.57□□□□□ -0.56
CEP290-206ENST00000552770 SPRYD7Q5W111 196 aa11.56□□□□□ -0.56
CEP290-206ENST00000552770 METTL3Q86U44 580 aaKnown RBP11.56□□□□□ -0.56
CEP290-206ENST00000552770 VSIG10Q8N0Z9 540 aa11.56□□□□□ -0.56
CEP290-206ENST00000552770 ANKLE1Q8NAG6 615 aa11.56□□□□□ -0.56
CEP290-206ENST00000552770 NLRP7Q8WX94 980 aa11.56□□□□□ -0.56
CEP290-206ENST00000552770 TESPA1A2RU30 521 aaPredicted RBP11.55□□□□□ -0.56
CEP290-206ENST00000552770 ADH1BP00325 375 aa11.55□□□□□ -0.56
CEP290-206ENST00000552770 HIC1Q14526 733 aa11.52□□□□□ -0.57
CEP290-206ENST00000552770 ZNF598Q86UK7 904 aaKnown RBP11.52□□□□□ -0.57
CEP290-206ENST00000552770 ZNF787Q6DD87 383 aa11.51□□□□□ -0.57
CEP290-206ENST00000552770 SCUBE3Q8IX30 993 aa11.51□□□□□ -0.57
CEP290-206ENST00000552770 KDM2AQ9Y2K7 1162 aa11.51□□□□□ -0.57
CEP290-206ENST00000552770 NR1I2O75469 434 aa11.5□□□□□ -0.57
CEP290-206ENST00000552770 OATP04181 439 aa11.5□□□□□ -0.57
CEP290-206ENST00000552770 ZNF697Q5TEC3 545 aa11.5□□□□□ -0.57
CEP290-206ENST00000552770 TNFRSF10AO00220 468 aa11.49□□□□□ -0.57
CEP290-206ENST00000552770 SLC6A16Q9GZN6 736 aa11.49□□□□□ -0.57
CEP290-206ENST00000552770 GDF9O60383 454 aa11.48□□□□□ -0.57
CEP290-206ENST00000552770 MYT1Q01538 1121 aa11.48□□□□□ -0.57
CEP290-206ENST00000552770 PHOX2BQ99453 314 aa11.48□□□□□ -0.57
CEP290-206ENST00000552770 PRR20EP86478 221 aa11.47□□□□□ -0.57
CEP290-206ENST00000552770 PRR20CP86479 221 aa11.47□□□□□ -0.57
CEP290-206ENST00000552770 PRR20DP86480 221 aa11.47□□□□□ -0.57
CEP290-206ENST00000552770 PRR20BP86481 221 aa11.47□□□□□ -0.57
CEP290-206ENST00000552770 PRR20AP86496 221 aa11.47□□□□□ -0.57
CEP290-206ENST00000552770 POTECB2RU33 542 aa11.46□□□□□ -0.57
CEP290-206ENST00000552770 GNPATO15228 680 aa11.46□□□□□ -0.57
CEP290-206ENST00000552770 SLC24A1O60721 1099 aa11.46□□□□□ -0.57
CEP290-206ENST00000552770 FUT2Q10981 343 aa11.44□□□□□ -0.58
CEP290-206ENST00000552770 ZNF775Q96BV0 537 aaPredicted RBP11.44□□□□□ -0.58
CEP290-206ENST00000552770 SPSB2Q99619 263 aa11.44□□□□□ -0.58
CEP290-206ENST00000552770 PKDCCQ504Y2 493 aa11.43□□□□□ -0.58
CEP290-206ENST00000552770 MORN1Q5T089 497 aa11.43□□□□□ -0.58
CEP290-206ENST00000552770 RDH13Q8NBN7 331 aa11.43□□□□□ -0.58
CEP290-206ENST00000552770 DAXXQ9UER7 740 aaPredicted RBP11.43□□□□□ -0.58
CEP290-206ENST00000552770 DDX11L8A8MPP1 907 aa11.42□□□□□ -0.58
CEP290-206ENST00000552770 THAP11Q96EK4 314 aa11.42□□□□□ -0.58
CEP290-206ENST00000552770 PKD2L1Q9P0L9 805 aa11.42□□□□□ -0.58
CEP290-206ENST00000552770 FAM187AA6NFU0 413 aa11.41□□□□□ -0.58
CEP290-206ENST00000552770 DGAT1O75907 488 aa11.4□□□□□ -0.58
CEP290-206ENST00000552770 PRDM9Q9NQV7 894 aa11.4□□□□□ -0.58
CEP290-206ENST00000552770 ST8SIA5O15466 376 aa11.39□□□□□ -0.59
CEP290-206ENST00000552770 FAM160A2Q8N612 972 aaPredicted RBP11.39□□□□□ -0.59
CEP290-206ENST00000552770 SLC27A5Q9Y2P5 690 aa11.39□□□□□ -0.59
CEP290-206ENST00000552770 FOXC1Q12948 553 aa11.37□□□□□ -0.59
CEP290-206ENST00000552770 FCF1Q9Y324 198 aaKnown RBP11.37□□□□□ -0.59
CEP290-206ENST00000552770 GCGRP47871 477 aa11.36□□□□□ -0.59
CEP290-206ENST00000552770 RSPH4AQ5TD94 716 aa11.35□□□□□ -0.59
CEP290-206ENST00000552770 SMYD5Q6GMV2 418 aa11.35□□□□□ -0.59
CEP290-206ENST00000552770 ATP6V1AP38606 617 aa11.34□□□□□ -0.59
CEP290-206ENST00000552770 RNF19BQ6ZMZ0 732 aa11.34□□□□□ -0.59
CEP290-206ENST00000552770 AAASQ9NRG9 546 aa11.33□□□□□ -0.6
CEP290-206ENST00000552770 GPIHBP1Q8IV16 184 aa11.32□□□□□ -0.6
CEP290-206ENST00000552770 BRICD5Q6PL45 260 aa11.31□□□□□ -0.6
CEP290-206ENST00000552770 DACH1Q9UI36 760 aa11.31□□□□□ -0.6
CEP290-206ENST00000552770 FMNL1O95466 1100 aaPredicted RBP11.3□□□□□ -0.6
CEP290-206ENST00000552770 RPIAP49247 311 aa11.29□□□□□ -0.6
CEP290-206ENST00000552770 TOR4AQ9NXH8 423 aa11.28□□□□□ -0.6
CEP290-206ENST00000552770 SULF1Q8IWU6 871 aa11.27□□□□□ -0.61
CEP290-206ENST00000552770 HLA-CQ95604 372 aa11.26□□□□□ -0.61
CEP290-206ENST00000552770 SALL2Q9Y467 1007 aaPredicted RBP11.26□□□□□ -0.61
CEP290-206ENST00000552770 CD46P15529 392 aa11.24□□□□□ -0.61
CEP290-206ENST00000552770 MSS51Q4VC12 460 aa11.24□□□□□ -0.61
CEP290-206ENST00000552770 LMOD2Q6P5Q4 547 aa11.24□□□□□ -0.61
CEP290-206ENST00000552770 CD2BP2O95400 341 aaKnown RBP11.21□□□□□ -0.61
CEP290-206ENST00000552770 AVPP01185 164 aa11.21□□□□□ -0.61
CEP290-206ENST00000552770 CRIPAKQ8N1N5 446 aa11.21□□□□□ -0.61
CEP290-206ENST00000552770 LCE2AQ5TA79 106 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms