RNA–Protein interactions for RNA: ENST00000552020.1

PPFIA2-226, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 3

Gene PPFIA2, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-226ENST00000552020 WWC1Q8IX03 1113 aa9.78□□□□□ -0.84
PPFIA2-226ENST00000552020 BANK1Q8NDB2 785 aa9.78□□□□□ -0.84
PPFIA2-226ENST00000552020 PCDHGA10Q9Y5H3 936 aa9.78□□□□□ -0.84
PPFIA2-226ENST00000552020 UNC13AQ9UPW8 1703 aa9.76□□□□□ -0.85
PPFIA2-226ENST00000552020 VARS2Q5ST30 1063 aaKnown RBP9.76□□□□□ -0.85
PPFIA2-226ENST00000552020 PXYLP1Q8TE99 480 aa9.76□□□□□ -0.85
PPFIA2-226ENST00000552020 CECR2Q9BXF3 1484 aa9.75□□□□□ -0.85
PPFIA2-226ENST00000552020 DIXDC1Q155Q3 683 aa9.75□□□□□ -0.85
PPFIA2-226ENST00000552020 TMEM259Q4ZIN3 620 aa9.75□□□□□ -0.85
PPFIA2-226ENST00000552020 GDPD2Q9HCC8 539 aa9.75□□□□□ -0.85
PPFIA2-226ENST00000552020 ZSWIM6Q9HCJ5 1215 aa9.75□□□□□ -0.85
PPFIA2-226ENST00000552020 ADGRG1Q9Y653 693 aa9.75□□□□□ -0.85
PPFIA2-226ENST00000552020 ABL2P42684 1182 aa9.74□□□□□ -0.85
PPFIA2-226ENST00000552020 TMCO4Q5TGY1 634 aa9.73□□□□□ -0.85
PPFIA2-226ENST00000552020 FBXW7Q969H0 707 aa9.73□□□□□ -0.85
PPFIA2-226ENST00000552020 CALR3Q96L12 384 aaKnown RBP9.73□□□□□ -0.85
PPFIA2-226ENST00000552020 LIMD1Q9UGP4 676 aa9.73□□□□□ -0.85
PPFIA2-226ENST00000552020 CSPP1Q1MSJ5 1256 aa9.72□□□□□ -0.85
PPFIA2-226ENST00000552020 SLC34A2O95436 690 aa9.71□□□□□ -0.86
PPFIA2-226ENST00000552020 FBXO31Q5XUX0 539 aaPredicted RBP9.71□□□□□ -0.86
PPFIA2-226ENST00000552020 RIC3Q7Z5B4 369 aa9.71□□□□□ -0.86
PPFIA2-226ENST00000552020 CERKQ8TCT0 537 aa9.71□□□□□ -0.86
PPFIA2-226ENST00000552020 GZF1Q9H116 711 aaPredicted RBP9.71□□□□□ -0.86
PPFIA2-226ENST00000552020 PRM3Q9NNZ6 103 aa9.71□□□□□ -0.86
PPFIA2-226ENST00000552020 MTMR14Q8NCE2 650 aa9.7□□□□□ -0.86
PPFIA2-226ENST00000552020 ACIN1Q9UKV3 1341 aaKnown RBP9.7□□□□□ -0.86
PPFIA2-226ENST00000552020 NACADO15069 1562 aa9.7□□□□□ -0.86
PPFIA2-226ENST00000552020 IRF5Q13568 498 aa9.69□□□□□ -0.86
PPFIA2-226ENST00000552020 RBM46Q8TBY0 533 aaKnown RBP9.69□□□□□ -0.86
PPFIA2-226ENST00000552020 JPH4Q96JJ6 628 aa9.69□□□□□ -0.86
PPFIA2-226ENST00000552020 CC2D2AQ9P2K1 1620 aa9.68□□□□□ -0.86
PPFIA2-226ENST00000552020 PPP1R15AO75807 674 aaPredicted RBP9.68□□□□□ -0.86
PPFIA2-226ENST00000552020 ARSIQ5FYB1 569 aa9.68□□□□□ -0.86
PPFIA2-226ENST00000552020 PPP2R2DQ66LE6 453 aa9.68□□□□□ -0.86
PPFIA2-226ENST00000552020 GPR153Q6NV75 609 aa9.68□□□□□ -0.86
PPFIA2-226ENST00000552020 GLMNQ92990 594 aa9.68□□□□□ -0.86
PPFIA2-226ENST00000552020 POM121CA8CG34 1229 aa9.67□□□□□ -0.86
PPFIA2-226ENST00000552020 C6orf132Q5T0Z8 1188 aa9.67□□□□□ -0.86
PPFIA2-226ENST00000552020 NUTM1Q86Y26 1132 aa9.67□□□□□ -0.86
PPFIA2-226ENST00000552020 ZNF687Q8N1G0 1237 aa9.67□□□□□ -0.86
PPFIA2-226ENST00000552020 SPIRE2Q8WWL2 714 aa9.67□□□□□ -0.86
PPFIA2-226ENST00000552020 PCDHGA4Q9Y5G9 962 aa9.67□□□□□ -0.86
PPFIA2-226ENST00000552020 BICRAQ9NZM4 1560 aa9.67□□□□□ -0.86
PPFIA2-226ENST00000552020 AP1G2O75843 785 aa9.66□□□□□ -0.86
PPFIA2-226ENST00000552020 TBC1D2BQ9UPU7 963 aa9.66□□□□□ -0.86
PPFIA2-226ENST00000552020 PDE4CQ08493 712 aa9.65□□□□□ -0.86
PPFIA2-226ENST00000552020 ZNF454Q8N9F8 522 aa9.65□□□□□ -0.86
PPFIA2-226ENST00000552020 RNF166Q96A37 237 aaPredicted RBP9.65□□□□□ -0.86
PPFIA2-226ENST00000552020 MTMR7Q9Y216 660 aa9.65□□□□□ -0.86
PPFIA2-226ENST00000552020 MFAP1P55081 439 aaKnown RBP9.64□□□□□ -0.87
PPFIA2-226ENST00000552020 RBM27Q9P2N5 1060 aaKnown RBP9.64□□□□□ -0.87
PPFIA2-226ENST00000552020 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.63□□□□□ -0.87
PPFIA2-226ENST00000552020 SPTLC1O15269 473 aa9.63□□□□□ -0.87
PPFIA2-226ENST00000552020 FOSBP53539 338 aa9.63□□□□□ -0.87
PPFIA2-226ENST00000552020 RSBN1LQ6PCB5 846 aaPredicted RBP9.63□□□□□ -0.87
PPFIA2-226ENST00000552020 ZDHHC16Q969W1 377 aa9.63□□□□□ -0.87
PPFIA2-226ENST00000552020 MYT1LQ9UL68 1186 aa9.63□□□□□ -0.87
PPFIA2-226ENST00000552020 MOXD2PA6NHM9 499 aa9.62□□□□□ -0.87
PPFIA2-226ENST00000552020 NUTM2BA6NNL0 878 aaPredicted RBP9.62□□□□□ -0.87
PPFIA2-226ENST00000552020 NUTM2EB1AL46 878 aaPredicted RBP9.62□□□□□ -0.87
PPFIA2-226ENST00000552020 PRSS12P56730 875 aa9.62□□□□□ -0.87
PPFIA2-226ENST00000552020 NUTM2DQ5VT03 806 aaPredicted RBP9.62□□□□□ -0.87
PPFIA2-226ENST00000552020 NUTM2AQ8IVF1 878 aaPredicted RBP9.62□□□□□ -0.87
PPFIA2-226ENST00000552020 TTC13Q8NBP0 860 aa9.62□□□□□ -0.87
PPFIA2-226ENST00000552020 KHSRPQ92945 711 aaKnown RBP eCLIP9.62□□□□□ -0.87
PPFIA2-226ENST00000552020 RCCD1A6NED2 376 aa9.61□□□□□ -0.87
PPFIA2-226ENST00000552020 DDX11L8A8MPP1 907 aa9.61□□□□□ -0.87
PPFIA2-226ENST00000552020 RFX1P22670 979 aa9.61□□□□□ -0.87
PPFIA2-226ENST00000552020 QPCTQ16769 361 aa9.61□□□□□ -0.87
PPFIA2-226ENST00000552020 SULF1Q8IWU6 871 aa9.61□□□□□ -0.87
PPFIA2-226ENST00000552020 RGS22Q8NE09 1264 aa9.61□□□□□ -0.87
PPFIA2-226ENST00000552020 CDCA7LQ96GN5 454 aa9.61□□□□□ -0.87
PPFIA2-226ENST00000552020 USP17L8P0C7I0 530 aa9.6□□□□□ -0.87
PPFIA2-226ENST00000552020 CD46P15529 392 aa9.6□□□□□ -0.87
PPFIA2-226ENST00000552020 ANKRD13DQ6ZTN6 518 aa9.6□□□□□ -0.87
PPFIA2-226ENST00000552020 NDUFV2P19404 249 aa9.59□□□□□ -0.87
PPFIA2-226ENST00000552020 TUSC1Q2TAM9 212 aa9.59□□□□□ -0.87
PPFIA2-226ENST00000552020 FOXD4L5Q5VV16 416 aaPredicted RBP9.59□□□□□ -0.87
PPFIA2-226ENST00000552020 FOXD4L4Q8WXT5 416 aaPredicted RBP9.59□□□□□ -0.87
PPFIA2-226ENST00000552020 PATL2C9JE40 543 aaKnown RBP9.58□□□□□ -0.88
PPFIA2-226ENST00000552020 RBM25P49756 843 aaKnown RBP9.58□□□□□ -0.88
PPFIA2-226ENST00000552020 RTL5Q5HYW3 569 aaPredicted RBP9.58□□□□□ -0.88
PPFIA2-226ENST00000552020 PBXIP1Q96AQ6 731 aa9.58□□□□□ -0.88
PPFIA2-226ENST00000552020 ADAM33Q9BZ11 813 aa9.58□□□□□ -0.88
PPFIA2-226ENST00000552020 CSB-PGBD3P0DP91 1061 aa9.57□□□□□ -0.88
PPFIA2-226ENST00000552020 HDGFL1Q5TGJ6 251 aa9.57□□□□□ -0.88
PPFIA2-226ENST00000552020 CABLES1Q8TDN4 633 aa9.57□□□□□ -0.88
PPFIA2-226ENST00000552020 NDUFB9Q9Y6M9 179 aa9.57□□□□□ -0.88
PPFIA2-226ENST00000552020 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.56□□□□□ -0.88
PPFIA2-226ENST00000552020 SOCS7O14512 581 aa9.56□□□□□ -0.88
PPFIA2-226ENST00000552020 LILRB3O75022 631 aa9.56□□□□□ -0.88
PPFIA2-226ENST00000552020 PCDHB15Q9Y5E8 787 aa9.56□□□□□ -0.88
PPFIA2-226ENST00000552020 NUDT7P0C024 238 aa9.55□□□□□ -0.88
PPFIA2-226ENST00000552020 RDH13Q8NBN7 331 aa9.55□□□□□ -0.88
PPFIA2-226ENST00000552020 DNAJB2P25686 324 aa9.53□□□□□ -0.88
PPFIA2-226ENST00000552020 FAM198AQ9UFP1 575 aa9.53□□□□□ -0.88
PPFIA2-226ENST00000552020 KDM4FA0A1W2PPD8 638 aa9.52□□□□□ -0.89
PPFIA2-226ENST00000552020 GJA5P36382 358 aa9.52□□□□□ -0.89
PPFIA2-226ENST00000552020 KCNA1Q09470 495 aa9.52□□□□□ -0.89
PPFIA2-226ENST00000552020 WASHC4Q2M389 1173 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms