RNA–Protein interactions for RNA: ENST00000550620.1

PDE1B-207, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best) BASIC

Gene PDE1B, Length 2,150 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-207ENST00000550620 MAGI2Q86UL8 1455 aa19.59■□□□□ 0.73
PDE1B-207ENST00000550620 PIK3C2GO75747 1445 aa19.57■□□□□ 0.72
PDE1B-207ENST00000550620 C8orf34Q49A92 452 aa19.56■□□□□ 0.72
PDE1B-207ENST00000550620 SYNMO15061 1565 aa19.56■□□□□ 0.72
PDE1B-207ENST00000550620 AMER1Q5JTC6 1135 aaPredicted RBP19.55■□□□□ 0.72
PDE1B-207ENST00000550620 SLFN5Q08AF3 891 aa19.54■□□□□ 0.72
PDE1B-207ENST00000550620 ASXL1Q8IXJ9 1541 aa19.54■□□□□ 0.72
PDE1B-207ENST00000550620 STAC3Q96MF2 364 aa19.54■□□□□ 0.72
PDE1B-207ENST00000550620 NPC1L1Q9UHC9 1359 aa19.54■□□□□ 0.72
PDE1B-207ENST00000550620 TTC37Q6PGP7 1564 aa19.52■□□□□ 0.72
PDE1B-207ENST00000550620 SCAF11Q99590 1463 aaKnown RBP19.51■□□□□ 0.71
PDE1B-207ENST00000550620 IQGAP1P46940 1657 aa19.51■□□□□ 0.71
PDE1B-207ENST00000550620 RTN4Q9NQC3 1192 aaKnown RBP19.51■□□□□ 0.71
PDE1B-207ENST00000550620 MADDQ8WXG6 1647 aa19.51■□□□□ 0.71
PDE1B-207ENST00000550620 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.51■□□□□ 0.71
PDE1B-207ENST00000550620 SLC4A3P48751 1232 aa19.5■□□□□ 0.71
PDE1B-207ENST00000550620 TRMT2AQ8IZ69 625 aaKnown RBP19.5■□□□□ 0.71
PDE1B-207ENST00000550620 ABCC2Q92887 1545 aa19.5■□□□□ 0.71
PDE1B-207ENST00000550620 NKTRP30414 1462 aaKnown RBP19.5■□□□□ 0.71
PDE1B-207ENST00000550620 SCAPERQ9BY12 1400 aa19.5■□□□□ 0.71
PDE1B-207ENST00000550620 NGEFQ8N5V2 710 aa19.49■□□□□ 0.71
PDE1B-207ENST00000550620 ANO8Q9HCE9 1232 aaPredicted RBP19.49■□□□□ 0.71
PDE1B-207ENST00000550620 RGS3P49796 1198 aa19.47■□□□□ 0.71
PDE1B-207ENST00000550620 E9PSI1 815 aa19.47■□□□□ 0.71
PDE1B-207ENST00000550620 FRAT1Q92837 279 aaPredicted RBP19.46■□□□□ 0.71
PDE1B-207ENST00000550620 SLC24A1O60721 1099 aa19.46■□□□□ 0.71
PDE1B-207ENST00000550620 NINLQ9Y2I6 1382 aa19.45■□□□□ 0.7
PDE1B-207ENST00000550620 TRPM2O94759 1503 aa19.44■□□□□ 0.7
PDE1B-207ENST00000550620 CGNL1Q0VF96 1302 aa19.43■□□□□ 0.7
PDE1B-207ENST00000550620 CCDC146Q8IYE0 955 aa19.42■□□□□ 0.7
PDE1B-207ENST00000550620 BRPF3Q9ULD4 1205 aa19.42■□□□□ 0.7
PDE1B-207ENST00000550620 SPHKAPQ2M3C7 1700 aa19.42■□□□□ 0.7
PDE1B-207ENST00000550620 APAF1O14727 1248 aa19.42■□□□□ 0.7
PDE1B-207ENST00000550620 PDE3AQ14432 1141 aa19.41■□□□□ 0.7
PDE1B-207ENST00000550620 MAPK8IP3Q9UPT6 1336 aa19.4■□□□□ 0.7
PDE1B-207ENST00000550620 MYOM1P52179 1685 aa19.39■□□□□ 0.69
PDE1B-207ENST00000550620 BCAR3O75815 825 aa19.39■□□□□ 0.69
PDE1B-207ENST00000550620 PLCH2O75038 1416 aa19.39■□□□□ 0.69
PDE1B-207ENST00000550620 PTPRTO14522 1441 aa19.38■□□□□ 0.69
PDE1B-207ENST00000550620 FRAT2O75474 233 aaPredicted RBP19.38■□□□□ 0.69
PDE1B-207ENST00000550620 EFCAB2Q5VUJ9 269 aa19.38■□□□□ 0.69
PDE1B-207ENST00000550620 SPINK5Q9NQ38 1064 aaPredicted RBP19.38■□□□□ 0.69
PDE1B-207ENST00000550620 KDM5AP29375 1690 aaKnown RBP19.38■□□□□ 0.69
PDE1B-207ENST00000550620 CEP152O94986 1710 aa19.38■□□□□ 0.69
PDE1B-207ENST00000550620 BECN1Q14457 450 aa19.37■□□□□ 0.69
PDE1B-207ENST00000550620 CENPJQ9HC77 1338 aaPredicted RBP19.36■□□□□ 0.69
PDE1B-207ENST00000550620 CANXP27824 592 aaKnown RBP19.35■□□□□ 0.69
PDE1B-207ENST00000550620 CLUAP1Q96AJ1 413 aa19.35■□□□□ 0.69
PDE1B-207ENST00000550620 ABCC1P33527 1531 aa19.35■□□□□ 0.69
PDE1B-207ENST00000550620 KIAA1210Q9ULL0 1709 aa19.35■□□□□ 0.69
PDE1B-207ENST00000550620 AAMPQ13685 434 aa19.34■□□□□ 0.69
PDE1B-207ENST00000550620 IGHDP01880 384 aa19.34■□□□□ 0.69
PDE1B-207ENST00000550620 RTEL1-TNFRSF6BF6WH68 1400 aa19.33■□□□□ 0.69
PDE1B-207ENST00000550620 PRKCSHP14314 528 aaPredicted RBP19.33■□□□□ 0.69
PDE1B-207ENST00000550620 VIRMAQ69YN4 1812 aaKnown RBP19.33■□□□□ 0.68
PDE1B-207ENST00000550620 NEURL4Q96JN8 1562 aa19.32■□□□□ 0.68
PDE1B-207ENST00000550620 CLTCL1P53675 1640 aa19.32■□□□□ 0.68
PDE1B-207ENST00000550620 USP19O94966 1318 aa19.31■□□□□ 0.68
PDE1B-207ENST00000550620 POLR3AO14802 1390 aaPredicted RBP19.31■□□□□ 0.68
PDE1B-207ENST00000550620 ZMYM3Q14202 1370 aa19.31■□□□□ 0.68
PDE1B-207ENST00000550620 SHROOM2Q13796 1616 aa19.31■□□□□ 0.68
PDE1B-207ENST00000550620 TRAPPC8Q9Y2L5 1435 aa19.31■□□□□ 0.68
PDE1B-207ENST00000550620 SPAG9O60271 1321 aaKnown RBP19.3■□□□□ 0.68
PDE1B-207ENST00000550620 PMFBP1Q8TBY8 1022 aa19.3■□□□□ 0.68
PDE1B-207ENST00000550620 KANK1Q14678 1352 aa19.29■□□□□ 0.68
PDE1B-207ENST00000550620 ERVK-7P63135 1459 aa19.29■□□□□ 0.68
PDE1B-207ENST00000550620 WWC1Q8IX03 1113 aa19.29■□□□□ 0.68
PDE1B-207ENST00000550620 UPF2Q9HAU5 1272 aaKnown RBP19.29■□□□□ 0.68
PDE1B-207ENST00000550620 TET3O43151 1660 aa19.28■□□□□ 0.68
PDE1B-207ENST00000550620 MYOM2P54296 1465 aa19.28■□□□□ 0.68
PDE1B-207ENST00000550620 COG6Q9Y2V7 657 aa19.27■□□□□ 0.68
PDE1B-207ENST00000550620 DEPDC5O75140 1603 aa19.27■□□□□ 0.67
PDE1B-207ENST00000550620 FAM43AQ8N2R8 423 aa19.26■□□□□ 0.67
PDE1B-207ENST00000550620 DMRT2Q9Y5R5 561 aa19.26■□□□□ 0.67
PDE1B-207ENST00000550620 PANK1Q8TE04 598 aa19.26■□□□□ 0.67
PDE1B-207ENST00000550620 ZFYVE16Q7Z3T8 1539 aa19.26■□□□□ 0.67
PDE1B-207ENST00000550620 CARD14Q9BXL6 1004 aa19.25■□□□□ 0.67
PDE1B-207ENST00000550620 MAP3K4Q9Y6R4 1608 aa19.24■□□□□ 0.67
PDE1B-207ENST00000550620 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.24■□□□□ 0.67
PDE1B-207ENST00000550620 SBNO2Q9Y2G9 1366 aa19.24■□□□□ 0.67
PDE1B-207ENST00000550620 NLRP1Q9C000 1473 aa19.23■□□□□ 0.67
PDE1B-207ENST00000550620 SEC24BO95487 1268 aa19.22■□□□□ 0.67
PDE1B-207ENST00000550620 CFAP70Q5T0N1 1121 aa19.22■□□□□ 0.67
PDE1B-207ENST00000550620 RUNDC1Q96C34 613 aa19.22■□□□□ 0.67
PDE1B-207ENST00000550620 ARAP3Q8WWN8 1544 aa19.22■□□□□ 0.67
PDE1B-207ENST00000550620 RARSP54136 660 aaKnown RBP19.22■□□□□ 0.67
PDE1B-207ENST00000550620 L1TD1Q5T7N2 865 aaKnown RBP19.21■□□□□ 0.67
PDE1B-207ENST00000550620 WDR63Q8IWG1 891 aa19.21■□□□□ 0.67
PDE1B-207ENST00000550620 VWDEQ8N2E2 1590 aa19.21■□□□□ 0.67
PDE1B-207ENST00000550620 ABCA6Q8N139 1617 aa19.21■□□□□ 0.67
PDE1B-207ENST00000550620 MYO3AQ8NEV4 1616 aa19.2■□□□□ 0.66
PDE1B-207ENST00000550620 ZCCHC11Q5TAX3 1644 aaKnown RBP19.19■□□□□ 0.66
PDE1B-207ENST00000550620 MORC1Q86VD1 984 aa19.19■□□□□ 0.66
PDE1B-207ENST00000550620 TBC1D32Q96NH3 1257 aa19.19■□□□□ 0.66
PDE1B-207ENST00000550620 SLKQ9H2G2 1235 aaPredicted RBP19.19■□□□□ 0.66
PDE1B-207ENST00000550620 RWDD1Q9H446 243 aaPredicted RBP19.19■□□□□ 0.66
PDE1B-207ENST00000550620 CHD1O14646 1710 aa19.19■□□□□ 0.66
PDE1B-207ENST00000550620 UHRF1BP1LA0JNW5 1464 aa19.18■□□□□ 0.66
PDE1B-207ENST00000550620 IQSEC2Q5JU85 1478 aa19.18■□□□□ 0.66
PDE1B-207ENST00000550620 AFAP1Q8N556 730 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms