RNA–Protein interactions for RNA: ENST00000550104.5

ATXN2-219, Transcript of ataxin 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATXN2, Length 4,648 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-219ENST00000550104 DISP3Q9P2K9 1392 aa21.6■■□□□ 1.05
ATXN2-219ENST00000550104 PDE4AP27815 886 aa21.6■■□□□ 1.05
ATXN2-219ENST00000550104 FANCAO15360 1455 aa21.6■■□□□ 1.05
ATXN2-219ENST00000550104 SHANK2Q9UPX8 1470 aa21.59■■□□□ 1.05
ATXN2-219ENST00000550104 ITPRIPQ8IWB1 547 aa21.59■■□□□ 1.05
ATXN2-219ENST00000550104 GGNBP2Q9H3C7 697 aa21.59■■□□□ 1.05
ATXN2-219ENST00000550104 TRAPPC8Q9Y2L5 1435 aa21.59■■□□□ 1.05
ATXN2-219ENST00000550104 ADGRF5Q8IZF2 1346 aa21.59■■□□□ 1.05
ATXN2-219ENST00000550104 FANCIQ9NVI1 1328 aa21.59■■□□□ 1.05
ATXN2-219ENST00000550104 ADGRL2O95490 1459 aa21.58■■□□□ 1.05
ATXN2-219ENST00000550104 MTHFSP49914 203 aa21.58■■□□□ 1.05
ATXN2-219ENST00000550104 COG6Q9Y2V7 657 aa21.58■■□□□ 1.05
ATXN2-219ENST00000550104 GCC2Q8IWJ2 1684 aa21.58■■□□□ 1.04
ATXN2-219ENST00000550104 ARXQ96QS3 562 aa21.58■■□□□ 1.04
ATXN2-219ENST00000550104 CD109Q6YHK3 1445 aa21.57■■□□□ 1.04
ATXN2-219ENST00000550104 LMOD2Q6P5Q4 547 aa21.56■■□□□ 1.04
ATXN2-219ENST00000550104 CENPQQ7L2Z9 268 aaPredicted RBP21.56■■□□□ 1.04
ATXN2-219ENST00000550104 PRAG1Q86YV5 1406 aa21.55■■□□□ 1.04
ATXN2-219ENST00000550104 RUNDC1Q96C34 613 aa21.55■■□□□ 1.04
ATXN2-219ENST00000550104 IPO8O15397 1037 aaKnown RBP21.54■■□□□ 1.04
ATXN2-219ENST00000550104 RWDD1Q9H446 243 aaPredicted RBP21.54■■□□□ 1.04
ATXN2-219ENST00000550104 RTN4Q9NQC3 1192 aaKnown RBP21.54■■□□□ 1.04
ATXN2-219ENST00000550104 DUOX2Q9NRD8 1548 aa21.52■■□□□ 1.03
ATXN2-219ENST00000550104 TCP11L2Q8N4U5 519 aa21.51■■□□□ 1.03
ATXN2-219ENST00000550104 NGEFQ8N5V2 710 aa21.5■■□□□ 1.03
ATXN2-219ENST00000550104 PMFBP1Q8TBY8 1022 aa21.5■■□□□ 1.03
ATXN2-219ENST00000550104 PRAM1Q96QH2 718 aa21.5■■□□□ 1.03
ATXN2-219ENST00000550104 DHX29Q7Z478 1369 aaKnown RBP21.5■■□□□ 1.03
ATXN2-219ENST00000550104 CHMP4BQ9H444 224 aaKnown RBP21.49■■□□□ 1.03
ATXN2-219ENST00000550104 DIAPH1O60610 1272 aaKnown RBP21.48■■□□□ 1.03
ATXN2-219ENST00000550104 ELL2O00472 640 aaPredicted RBP21.48■■□□□ 1.03
ATXN2-219ENST00000550104 TESK2Q96S53 571 aa21.48■■□□□ 1.03
ATXN2-219ENST00000550104 CALD1Q05682 793 aaKnown RBP21.47■■□□□ 1.03
ATXN2-219ENST00000550104 SLC52A1Q9NWF4 448 aa21.47■■□□□ 1.03
ATXN2-219ENST00000550104 EID1Q9Y6B2 187 aa21.47■■□□□ 1.03
ATXN2-219ENST00000550104 ABCC2Q92887 1545 aa21.47■■□□□ 1.03
ATXN2-219ENST00000550104 ABCC10Q5T3U5 1492 aa21.47■■□□□ 1.03
ATXN2-219ENST00000550104 PAK3O75914 559 aaPredicted RBP21.46■■□□□ 1.03
ATXN2-219ENST00000550104 PANK1Q8TE04 598 aa21.46■■□□□ 1.03
ATXN2-219ENST00000550104 RIPK4P57078 832 aa21.44■■□□□ 1.02
ATXN2-219ENST00000550104 ASXL2Q76L83 1435 aa21.44■■□□□ 1.02
ATXN2-219ENST00000550104 SCAF11Q99590 1463 aaKnown RBP21.44■■□□□ 1.02
ATXN2-219ENST00000550104 DEKP35659 375 aaKnown RBP21.44■■□□□ 1.02
ATXN2-219ENST00000550104 COG3Q96JB2 828 aa21.44■■□□□ 1.02
ATXN2-219ENST00000550104 RPGRIP1LQ68CZ1 1315 aa21.44■■□□□ 1.02
ATXN2-219ENST00000550104 ARHGEF12Q9NZN5 1544 aa21.44■■□□□ 1.02
ATXN2-219ENST00000550104 RTF1Q92541 710 aaKnown RBP21.44■■□□□ 1.02
ATXN2-219ENST00000550104 BCAR3O75815 825 aa21.44■■□□□ 1.02
ATXN2-219ENST00000550104 KDM5BQ9UGL1 1544 aa21.43■■□□□ 1.02
ATXN2-219ENST00000550104 NGDNQ8NEJ9 315 aaKnown RBP21.43■■□□□ 1.02
ATXN2-219ENST00000550104 ABCA8O94911 1581 aa21.43■■□□□ 1.02
ATXN2-219ENST00000550104 ZKSCAN2Q63HK3 967 aa21.43■■□□□ 1.02
ATXN2-219ENST00000550104 UHRF1BP1Q6BDS2 1440 aa21.43■■□□□ 1.02
ATXN2-219ENST00000550104 FAM161AQ3B820 660 aa21.42■■□□□ 1.02
ATXN2-219ENST00000550104 SPATA31E1Q6ZUB1 1445 aa21.42■■□□□ 1.02
ATXN2-219ENST00000550104 MBD5Q9P267 1494 aa21.41■■□□□ 1.02
ATXN2-219ENST00000550104 WDR7Q9Y4E6 1490 aa21.41■■□□□ 1.02
ATXN2-219ENST00000550104 SPRYD3Q8NCJ5 442 aa21.41■■□□□ 1.02
ATXN2-219ENST00000550104 NOS1P29475 1434 aa21.41■■□□□ 1.02
ATXN2-219ENST00000550104 NSD3Q9BZ95 1437 aa21.41■■□□□ 1.02
ATXN2-219ENST00000550104 SLC4A3P48751 1232 aa21.41■■□□□ 1.02
ATXN2-219ENST00000550104 APBB1O00213 710 aa21.4■■□□□ 1.02
ATXN2-219ENST00000550104 HMOX1P09601 288 aa21.4■■□□□ 1.02
ATXN2-219ENST00000550104 IDI1Q13907 227 aa21.4■■□□□ 1.02
ATXN2-219ENST00000550104 CABP1Q9NZU7 370 aa21.38■■□□□ 1.01
ATXN2-219ENST00000550104 A2MP01023 1474 aa21.38■■□□□ 1.01
ATXN2-219ENST00000550104 PER1O15534 1290 aaPredicted RBP21.36■■□□□ 1.01
ATXN2-219ENST00000550104 PARD3Q8TEW0 1356 aa21.36■■□□□ 1.01
ATXN2-219ENST00000550104 CDK19Q9BWU1 502 aa21.36■■□□□ 1.01
ATXN2-219ENST00000550104 HAP1P54257 671 aaPredicted RBP21.36■■□□□ 1.01
ATXN2-219ENST00000550104 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.36■■□□□ 1.01
ATXN2-219ENST00000550104 ADGBQ8N7X0 1667 aa21.36■■□□□ 1.01
ATXN2-219ENST00000550104 SLKQ9H2G2 1235 aaPredicted RBP21.36■■□□□ 1.01
ATXN2-219ENST00000550104 C20orf194Q5TEA3 1177 aa21.35■■□□□ 1.01
ATXN2-219ENST00000550104 FBXO31Q5XUX0 539 aaPredicted RBP21.35■■□□□ 1.01
ATXN2-219ENST00000550104 SLFN5Q08AF3 891 aa21.35■■□□□ 1.01
ATXN2-219ENST00000550104 AMER1Q5JTC6 1135 aaPredicted RBP21.35■■□□□ 1.01
ATXN2-219ENST00000550104 LMOD3Q0VAK6 560 aa21.35■■□□□ 1.01
ATXN2-219ENST00000550104 TXNDC2Q86VQ3 553 aa21.34■■□□□ 1.01
ATXN2-219ENST00000550104 DZIP1LQ8IYY4 767 aaKnown RBP21.34■■□□□ 1.01
ATXN2-219ENST00000550104 AMPHP49418 695 aa21.34■■□□□ 1.01
ATXN2-219ENST00000550104 DENND4BO75064 1496 aaPredicted RBP21.33■■□□□ 1.01
ATXN2-219ENST00000550104 MFAP1P55081 439 aaKnown RBP21.33■■□□□ 1.01
ATXN2-219ENST00000550104 C14orf93Q9H972 538 aaKnown RBP21.33■■□□□ 1
ATXN2-219ENST00000550104 LTV1Q96GA3 475 aaPredicted RBP21.33■■□□□ 1
ATXN2-219ENST00000550104 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.32■■□□□ 12e-7■■■□□ 16.3
ATXN2-219ENST00000550104 GLIPR1L2Q4G1C9 344 aa21.32■■□□□ 1
ATXN2-219ENST00000550104 TSR2Q969E8 191 aaKnown RBP21.32■■□□□ 1
ATXN2-219ENST00000550104 LRRIQ1Q96JM4 1722 aa21.32■■□□□ 1
ATXN2-219ENST00000550104 CASC1Q6TDU7 716 aa21.32■■□□□ 1
ATXN2-219ENST00000550104 WWC1Q8IX03 1113 aa21.31■■□□□ 1
ATXN2-219ENST00000550104 SKAP1Q86WV1 359 aa21.31■■□□□ 1
ATXN2-219ENST00000550104 ARHGEF5Q12774 1597 aa21.29■■□□□ 1
ATXN2-219ENST00000550104 HSP90AB1P08238 724 aaKnown RBP21.29■■□□□ 1
ATXN2-219ENST00000550104 HSCBQ8IWL3 235 aa21.28■■□□□ 1
ATXN2-219ENST00000550104 RTEL1-TNFRSF6BF6WH68 1400 aa21.28■■□□□ 1
ATXN2-219ENST00000550104 EXOSC9Q06265 439 aaKnown RBP21.28■■□□□ 1
ATXN2-219ENST00000550104 SAMD9LQ8IVG5 1584 aa21.28■■□□□ 1
ATXN2-219ENST00000550104 PRKAR2BP31323 418 aa21.28■■□□□ 1
ATXN2-219ENST00000550104 DUSP27Q5VZP5 1158 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms