RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 RCCD1A6NED2 376 aa12.18□□□□□ -0.46
CCDC38-208ENST00000549876 GFRA3O60609 400 aa12.18□□□□□ -0.46
CCDC38-208ENST00000549876 PCDHB3Q9Y5E6 796 aa12.18□□□□□ -0.46
CCDC38-208ENST00000549876 LCE2BO14633 110 aa12.17□□□□□ -0.46
CCDC38-208ENST00000549876 FCHSD2O94868 740 aa12.17□□□□□ -0.46
CCDC38-208ENST00000549876 TMUB1Q9BVT8 246 aa12.16□□□□□ -0.46
CCDC38-208ENST00000549876 BLOC1S3Q6QNY0 202 aa12.15□□□□□ -0.46
CCDC38-208ENST00000549876 GGCXP38435 758 aa12.14□□□□□ -0.47
CCDC38-208ENST00000549876 NRG2O14511 850 aaPredicted RBP12.13□□□□□ -0.47
CCDC38-208ENST00000549876 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.12□□□□□ -0.47
CCDC38-208ENST00000549876 ACTN4O43707 911 aaKnown RBP12.12□□□□□ -0.47
CCDC38-208ENST00000549876 TESPA1A2RU30 521 aaPredicted RBP12.11□□□□□ -0.47
CCDC38-208ENST00000549876 SLC10A3P09131 477 aa12.11□□□□□ -0.47
CCDC38-208ENST00000549876 PXYLP1Q8TE99 480 aa12.11□□□□□ -0.47
CCDC38-208ENST00000549876 CFHP08603 1231 aa12.09□□□□□ -0.47
CCDC38-208ENST00000549876 PLCB2Q00722 1185 aa12.09□□□□□ -0.47
CCDC38-208ENST00000549876 KMT5BQ4FZB7 885 aa12.09□□□□□ -0.47
CCDC38-208ENST00000549876 TRAF7Q6Q0C0 670 aa12.09□□□□□ -0.47
CCDC38-208ENST00000549876 TLL1O43897 1013 aa12.08□□□□□ -0.48
CCDC38-208ENST00000549876 OATP04181 439 aa12.08□□□□□ -0.48
CCDC38-208ENST00000549876 HIC1Q14526 733 aa12.08□□□□□ -0.48
CCDC38-208ENST00000549876 RNF223E7ERA6 249 aa12.07□□□□□ -0.48
CCDC38-208ENST00000549876 RBM26Q5T8P6 1007 aaKnown RBP12.06□□□□□ -0.48
CCDC38-208ENST00000549876 EMID1Q96A84 441 aaPredicted RBP12.06□□□□□ -0.48
CCDC38-208ENST00000549876 METTL3Q86U44 580 aaKnown RBP12.05□□□□□ -0.48
CCDC38-208ENST00000549876 PDZRN3Q9UPQ7 1066 aa12.04□□□□□ -0.48
CCDC38-208ENST00000549876 GPR37O15354 613 aa12.03□□□□□ -0.48
CCDC38-208ENST00000549876 FECHP22830 423 aa12.02□□□□□ -0.49
CCDC38-208ENST00000549876 SLC19A1P41440 591 aa12.01□□□□□ -0.49
CCDC38-208ENST00000549876 SMYD5Q6GMV2 418 aa12.01□□□□□ -0.49
CCDC38-208ENST00000549876 ANKLE1Q8NAG6 615 aa12.01□□□□□ -0.49
CCDC38-208ENST00000549876 GNPATO15228 680 aa12□□□□□ -0.49
CCDC38-208ENST00000549876 S1PR4O95977 384 aa12□□□□□ -0.49
CCDC38-208ENST00000549876 PPEF1O14829 653 aaPredicted RBP11.99□□□□□ -0.49
CCDC38-208ENST00000549876 NR1I2O75469 434 aa11.99□□□□□ -0.49
CCDC38-208ENST00000549876 ADH1BP00325 375 aa11.99□□□□□ -0.49
CCDC38-208ENST00000549876 TRIM67Q6ZTA4 783 aa11.99□□□□□ -0.49
CCDC38-208ENST00000549876 SPRYD7Q5W111 196 aa11.97□□□□□ -0.49
CCDC38-208ENST00000549876 RSPH4AQ5TD94 716 aa11.96□□□□□ -0.49
CCDC38-208ENST00000549876 SCUBE3Q8IX30 993 aa11.96□□□□□ -0.49
CCDC38-208ENST00000549876 LIAT1Q6ZQX7 453 aa11.95□□□□□ -0.5
CCDC38-208ENST00000549876 DAXXQ9UER7 740 aaPredicted RBP11.95□□□□□ -0.5
CCDC38-208ENST00000549876 PUS10Q3MIT2 529 aaKnown RBP11.94□□□□□ -0.5
CCDC38-208ENST00000549876 ZNF598Q86UK7 904 aaKnown RBP11.94□□□□□ -0.5
CCDC38-208ENST00000549876 SLC6A16Q9GZN6 736 aa11.93□□□□□ -0.5
CCDC38-208ENST00000549876 PRR20EP86478 221 aa11.9□□□□□ -0.5
CCDC38-208ENST00000549876 PRR20CP86479 221 aa11.9□□□□□ -0.5
CCDC38-208ENST00000549876 PRR20DP86480 221 aa11.9□□□□□ -0.5
CCDC38-208ENST00000549876 PRR20BP86481 221 aa11.9□□□□□ -0.5
CCDC38-208ENST00000549876 PRR20AP86496 221 aa11.9□□□□□ -0.5
CCDC38-208ENST00000549876 PLA2G2CQ5R387 149 aa11.9□□□□□ -0.5
CCDC38-208ENST00000549876 NLRP7Q8WX94 980 aa11.9□□□□□ -0.5
CCDC38-208ENST00000549876 PHOX2BQ99453 314 aa11.9□□□□□ -0.5
CCDC38-208ENST00000549876 MORN1Q5T089 497 aa11.89□□□□□ -0.51
CCDC38-208ENST00000549876 SPSB2Q99619 263 aa11.89□□□□□ -0.51
CCDC38-208ENST00000549876 ZNF697Q5TEC3 545 aa11.88□□□□□ -0.51
CCDC38-208ENST00000549876 RDH13Q8NBN7 331 aa11.88□□□□□ -0.51
CCDC38-208ENST00000549876 DDX11L8A8MPP1 907 aa11.87□□□□□ -0.51
CCDC38-208ENST00000549876 GDF9O60383 454 aa11.87□□□□□ -0.51
CCDC38-208ENST00000549876 THAP11Q96EK4 314 aa11.87□□□□□ -0.51
CCDC38-208ENST00000549876 KDM2AQ9Y2K7 1162 aa11.87□□□□□ -0.51
CCDC38-208ENST00000549876 FUT2Q10981 343 aa11.86□□□□□ -0.51
CCDC38-208ENST00000549876 GCGRP47871 477 aa11.85□□□□□ -0.51
CCDC38-208ENST00000549876 HAP1P54257 671 aaPredicted RBP11.85□□□□□ -0.51
CCDC38-208ENST00000549876 GPIHBP1Q8IV16 184 aa11.85□□□□□ -0.51
CCDC38-208ENST00000549876 DGAT1O75907 488 aa11.84□□□□□ -0.51
CCDC38-208ENST00000549876 ATP6V1AP38606 617 aa11.84□□□□□ -0.51
CCDC38-208ENST00000549876 ZNF787Q6DD87 383 aa11.83□□□□□ -0.52
CCDC38-208ENST00000549876 SULF1Q8IWU6 871 aa11.83□□□□□ -0.52
CCDC38-208ENST00000549876 MYT1Q01538 1121 aa11.82□□□□□ -0.52
CCDC38-208ENST00000549876 PKDCCQ504Y2 493 aa11.82□□□□□ -0.52
CCDC38-208ENST00000549876 SLC27A5Q9Y2P5 690 aa11.82□□□□□ -0.52
CCDC38-208ENST00000549876 FAM160A2Q8N612 972 aaPredicted RBP11.81□□□□□ -0.52
CCDC38-208ENST00000549876 SALL2Q9Y467 1007 aaPredicted RBP11.8□□□□□ -0.52
CCDC38-208ENST00000549876 TNFRSF10AO00220 468 aa11.79□□□□□ -0.52
CCDC38-208ENST00000549876 FMNL1O95466 1100 aaPredicted RBP11.78□□□□□ -0.52
CCDC38-208ENST00000549876 PKD2L1Q9P0L9 805 aa11.78□□□□□ -0.52
CCDC38-208ENST00000549876 RPIAP49247 311 aa11.77□□□□□ -0.53
CCDC38-208ENST00000549876 BRICD5Q6PL45 260 aa11.77□□□□□ -0.53
CCDC38-208ENST00000549876 FCF1Q9Y324 198 aaKnown RBP11.76□□□□□ -0.53
CCDC38-208ENST00000549876 FAM187AA6NFU0 413 aa11.75□□□□□ -0.53
CCDC38-208ENST00000549876 LMOD2Q6P5Q4 547 aa11.75□□□□□ -0.53
CCDC38-208ENST00000549876 MAP2K5Q13163 448 aa11.74□□□□□ -0.53
CCDC38-208ENST00000549876 PRDM9Q9NQV7 894 aa11.74□□□□□ -0.53
CCDC38-208ENST00000549876 CD46P15529 392 aa11.72□□□□□ -0.53
CCDC38-208ENST00000549876 MSS51Q4VC12 460 aa11.72□□□□□ -0.53
CCDC38-208ENST00000549876 RNF19BQ6ZMZ0 732 aa11.72□□□□□ -0.53
CCDC38-208ENST00000549876 FOXC1Q12948 553 aa11.71□□□□□ -0.53
CCDC38-208ENST00000549876 ZNF775Q96BV0 537 aaPredicted RBP11.71□□□□□ -0.53
CCDC38-208ENST00000549876 IRF6O14896 467 aa11.7□□□□□ -0.54
CCDC38-208ENST00000549876 GRIPAP1Q4V328 841 aa11.7□□□□□ -0.54
CCDC38-208ENST00000549876 POTECB2RU33 542 aa11.69□□□□□ -0.54
CCDC38-208ENST00000549876 CD2BP2O95400 341 aaKnown RBP11.69□□□□□ -0.54
CCDC38-208ENST00000549876 AAASQ9NRG9 546 aa11.68□□□□□ -0.54
CCDC38-208ENST00000549876 TOR4AQ9NXH8 423 aa11.68□□□□□ -0.54
CCDC38-208ENST00000549876 VSIG10Q8N0Z9 540 aa11.67□□□□□ -0.54
CCDC38-208ENST00000549876 MINK1Q8N4C8 1332 aaPredicted RBP11.66□□□□□ -0.54
CCDC38-208ENST00000549876 ST8SIA5O15466 376 aa11.66□□□□□ -0.54
CCDC38-208ENST00000549876 Q3C1V9 767 aa11.66□□□□□ -0.54
CCDC38-208ENST00000549876 KDM4AO75164 1064 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms