RNA–Protein interactions for RNA: ENST00000549770.1

NPAS3-207, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-207ENST00000549770 EIF2AK4Q9P2K8 1649 aaKnown RBP9.83□□□□□ -0.84
NPAS3-207ENST00000549770 NPATQ14207 1427 aa9.82□□□□□ -0.84
NPAS3-207ENST00000549770 MROH1Q8NDA8 1641 aa9.82□□□□□ -0.84
NPAS3-207ENST00000549770 MYO3AQ8NEV4 1616 aa9.82□□□□□ -0.84
NPAS3-207ENST00000549770 CEP152O94986 1710 aa9.82□□□□□ -0.84
NPAS3-207ENST00000549770 GALR2O43603 387 aaPredicted RBP9.82□□□□□ -0.84
NPAS3-207ENST00000549770 DCAF8Q5TAQ9 597 aa9.82□□□□□ -0.84
NPAS3-207ENST00000549770 FBXO31Q5XUX0 539 aaPredicted RBP9.82□□□□□ -0.84
NPAS3-207ENST00000549770 PLSCR2Q9NRY7 297 aa9.82□□□□□ -0.84
NPAS3-207ENST00000549770 STRCQ7RTU9 1775 aa9.82□□□□□ -0.84
NPAS3-207ENST00000549770 ABCC3O15438 1527 aa9.81□□□□□ -0.84
NPAS3-207ENST00000549770 ANKRD30AQ9BXX3 1397 aa9.8□□□□□ -0.84
NPAS3-207ENST00000549770 ITGAEP38570 1179 aa9.8□□□□□ -0.84
NPAS3-207ENST00000549770 ERBINQ96RT1 1412 aa9.8□□□□□ -0.84
NPAS3-207ENST00000549770 ZNF142P52746 1687 aaPredicted RBP9.8□□□□□ -0.84
NPAS3-207ENST00000549770 CEP170BQ9Y4F5 1589 aaPredicted RBP9.8□□□□□ -0.84
NPAS3-207ENST00000549770 PZPP20742 1482 aa9.79□□□□□ -0.84
NPAS3-207ENST00000549770 CAMSAP1Q5T5Y3 1602 aa9.79□□□□□ -0.84
NPAS3-207ENST00000549770 FAM135AQ9P2D6 1515 aa9.79□□□□□ -0.84
NPAS3-207ENST00000549770 SPOCK2Q92563 424 aa9.79□□□□□ -0.84
NPAS3-207ENST00000549770 CFAP65Q6ZU64 1925 aaKnown RBP9.79□□□□□ -0.84
NPAS3-207ENST00000549770 ZC3H13Q5T200 1668 aaKnown RBP9.79□□□□□ -0.84
NPAS3-207ENST00000549770 NCOA1Q15788 1441 aa9.79□□□□□ -0.84
NPAS3-207ENST00000549770 TNRQ92752 1358 aa9.78□□□□□ -0.84
NPAS3-207ENST00000549770 KIF12Q96FN5 646 aa9.78□□□□□ -0.84
NPAS3-207ENST00000549770 MS4A3Q96HJ5 214 aa9.78□□□□□ -0.84
NPAS3-207ENST00000549770 ADGRL2O95490 1459 aa9.78□□□□□ -0.84
NPAS3-207ENST00000549770 PRDM15P57071 1507 aaPredicted RBP9.77□□□□□ -0.84
NPAS3-207ENST00000549770 ILDR1Q86SU0 546 aaPredicted RBP9.77□□□□□ -0.85
NPAS3-207ENST00000549770 DEPDC5O75140 1603 aa9.77□□□□□ -0.85
NPAS3-207ENST00000549770 NCKAP5LQ9HCH0 1330 aa9.77□□□□□ -0.85
NPAS3-207ENST00000549770 A2ML1A8K2U0 1454 aa9.76□□□□□ -0.85
NPAS3-207ENST00000549770 MAP3K13O43283 966 aa9.75□□□□□ -0.85
NPAS3-207ENST00000549770 KANK1Q14678 1352 aa9.75□□□□□ -0.85
NPAS3-207ENST00000549770 ANKRD50Q9ULJ7 1429 aa9.74□□□□□ -0.85
NPAS3-207ENST00000549770 ERVK-7P63135 1459 aa9.74□□□□□ -0.85
NPAS3-207ENST00000549770 SPATA31D1Q6ZQQ2 1576 aa9.73□□□□□ -0.85
NPAS3-207ENST00000549770 GSE1Q14687 1217 aa9.73□□□□□ -0.85
NPAS3-207ENST00000549770 UGGT1Q9NYU2 1555 aa9.72□□□□□ -0.85
NPAS3-207ENST00000549770 PYGBP11216 843 aa9.72□□□□□ -0.85
NPAS3-207ENST00000549770 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.72□□□□□ -0.85
NPAS3-207ENST00000549770 PTPRTO14522 1441 aa9.72□□□□□ -0.85
NPAS3-207ENST00000549770 NLRP1Q9C000 1473 aa9.72□□□□□ -0.85
NPAS3-207ENST00000549770 VWDEQ8N2E2 1590 aa9.71□□□□□ -0.85
NPAS3-207ENST00000549770 POLR1AO95602 1720 aaPredicted RBP9.71□□□□□ -0.85
NPAS3-207ENST00000549770 CIZ1Q9ULV3 898 aaPredicted RBP9.71□□□□□ -0.86
NPAS3-207ENST00000549770 PCDHB13Q9Y5F0 798 aa9.71□□□□□ -0.86
NPAS3-207ENST00000549770 RRBP1Q9P2E9 1410 aaKnown RBP9.71□□□□□ -0.86
NPAS3-207ENST00000549770 PLA2R1Q13018 1463 aa9.71□□□□□ -0.86
NPAS3-207ENST00000549770 ROCK1Q13464 1354 aa9.7□□□□□ -0.86
NPAS3-207ENST00000549770 ARHGAP31Q2M1Z3 1444 aa9.7□□□□□ -0.86
NPAS3-207ENST00000549770 EFCAB6Q5THR3 1501 aa9.7□□□□□ -0.86
NPAS3-207ENST00000549770 UNC13BO14795 1591 aa9.7□□□□□ -0.86
NPAS3-207ENST00000549770 PIK3C2BO00750 1634 aa9.69□□□□□ -0.86
NPAS3-207ENST00000549770 PKD2Q13563 968 aa9.69□□□□□ -0.86
NPAS3-207ENST00000549770 LMTK2Q8IWU2 1503 aa9.69□□□□□ -0.86
NPAS3-207ENST00000549770 UBR1Q8IWV7 1749 aa9.69□□□□□ -0.86
NPAS3-207ENST00000549770 CERKQ8TCT0 537 aa9.69□□□□□ -0.86
NPAS3-207ENST00000549770 NEURL4Q96JN8 1562 aa9.69□□□□□ -0.86
NPAS3-207ENST00000549770 SYNMO15061 1565 aa9.68□□□□□ -0.86
NPAS3-207ENST00000549770 THEMISQ8N1K5 641 aaPredicted RBP9.68□□□□□ -0.86
NPAS3-207ENST00000549770 TET3O43151 1660 aa9.67□□□□□ -0.86
NPAS3-207ENST00000549770 ZNF335Q9H4Z2 1342 aaPredicted RBP9.67□□□□□ -0.86
NPAS3-207ENST00000549770 ANKLE2Q86XL3 938 aa9.67□□□□□ -0.86
NPAS3-207ENST00000549770 FBXO41Q8TF61 875 aa9.67□□□□□ -0.86
NPAS3-207ENST00000549770 SGIP1Q9BQI5 828 aa9.67□□□□□ -0.86
NPAS3-207ENST00000549770 GCC2Q8IWJ2 1684 aa9.67□□□□□ -0.86
NPAS3-207ENST00000549770 LTBP4Q8N2S1 1624 aa9.67□□□□□ -0.86
NPAS3-207ENST00000549770 AMER1Q5JTC6 1135 aaPredicted RBP9.66□□□□□ -0.86
NPAS3-207ENST00000549770 TRPC6Q9Y210 931 aa9.66□□□□□ -0.86
NPAS3-207ENST00000549770 E9PCH4 1651 aa9.66□□□□□ -0.86
NPAS3-207ENST00000549770 IQGAP3Q86VI3 1631 aa9.66□□□□□ -0.86
NPAS3-207ENST00000549770 NUP155O75694 1391 aa9.65□□□□□ -0.86
NPAS3-207ENST00000549770 IFNL1Q8IU54 200 aa9.65□□□□□ -0.86
NPAS3-207ENST00000549770 NPHP4O75161 1426 aaPredicted RBP9.65□□□□□ -0.87
NPAS3-207ENST00000549770 NOS1P29475 1434 aa9.65□□□□□ -0.87
NPAS3-207ENST00000549770 IQGAP1P46940 1657 aa9.64□□□□□ -0.87
NPAS3-207ENST00000549770 IDI1Q13907 227 aa9.64□□□□□ -0.87
NPAS3-207ENST00000549770 OTUD5Q96G74 571 aa9.64□□□□□ -0.87
NPAS3-207ENST00000549770 NAIPQ13075 1403 aa9.64□□□□□ -0.87
NPAS3-207ENST00000549770 MYO5BQ9ULV0 1848 aa9.63□□□□□ -0.87
NPAS3-207ENST00000549770 LTKP29376 864 aa9.63□□□□□ -0.87
NPAS3-207ENST00000549770 RPRD2Q5VT52 1461 aaKnown RBP9.63□□□□□ -0.87
NPAS3-207ENST00000549770 ADGRB3O60242 1522 aa9.62□□□□□ -0.87
NPAS3-207ENST00000549770 SCAF11Q99590 1463 aaKnown RBP9.62□□□□□ -0.87
NPAS3-207ENST00000549770 ATMINO43313 823 aaPredicted RBP9.62□□□□□ -0.87
NPAS3-207ENST00000549770 ASTLQ6HA08 431 aaPredicted RBP9.62□□□□□ -0.87
NPAS3-207ENST00000549770 TXNDC2Q86VQ3 553 aa9.62□□□□□ -0.87
NPAS3-207ENST00000549770 SLIT1O75093 1534 aa9.61□□□□□ -0.87
NPAS3-207ENST00000549770 MED14O60244 1454 aa9.61□□□□□ -0.87
NPAS3-207ENST00000549770 ARHGAP23Q9P227 1491 aa9.61□□□□□ -0.87
NPAS3-207ENST00000549770 POTEB2H3BUK9 544 aa9.61□□□□□ -0.87
NPAS3-207ENST00000549770 CHGAP10645 457 aaKnown RBP9.61□□□□□ -0.87
NPAS3-207ENST00000549770 PCDHB8Q9UN66 801 aa9.61□□□□□ -0.87
NPAS3-207ENST00000549770 TMEM2Q9UHN6 1383 aa9.61□□□□□ -0.87
NPAS3-207ENST00000549770 TIE1P35590 1138 aa9.6□□□□□ -0.87
NPAS3-207ENST00000549770 TRIM52Q96A61 297 aa9.6□□□□□ -0.87
NPAS3-207ENST00000549770 BMP2KQ9NSY1 1161 aaPredicted RBP9.6□□□□□ -0.87
NPAS3-207ENST00000549770 SLC52A1Q9NWF4 448 aa9.6□□□□□ -0.87
NPAS3-207ENST00000549770 EID1Q9Y6B2 187 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms