RNA–Protein interactions for RNA: ENST00000549040.5

RFX4-208, Transcript of regulatory factor X4, humanhuman

TSL 4

Gene RFX4, Length 473 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-208ENST00000549040 TSPY10P0CW01 314 aa12.26□□□□□ -0.45
RFX4-208ENST00000549040 CCDC141Q6ZP82 1450 aa12.26□□□□□ -0.45
RFX4-208ENST00000549040 CFAP74Q9C0B2 1584 aa12.26□□□□□ -0.45
RFX4-208ENST00000549040 DPY19L2Q6NUT2 758 aa12.25□□□□□ -0.45
RFX4-208ENST00000549040 PCGF6Q9BYE7 350 aa12.25□□□□□ -0.45
RFX4-208ENST00000549040 SPAG9O60271 1321 aaKnown RBP12.25□□□□□ -0.45
RFX4-208ENST00000549040 DNMT1P26358 1616 aaKnown RBP12.25□□□□□ -0.45
RFX4-208ENST00000549040 NCOA1Q15788 1441 aa12.24□□□□□ -0.45
RFX4-208ENST00000549040 FRMPD1Q5SYB0 1578 aa12.23□□□□□ -0.45
RFX4-208ENST00000549040 ZNF518AQ6AHZ1 1483 aa12.23□□□□□ -0.45
RFX4-208ENST00000549040 RTEL1-TNFRSF6BF6WH68 1400 aa12.23□□□□□ -0.45
RFX4-208ENST00000549040 C9orf84Q5VXU9 1444 aa12.23□□□□□ -0.45
RFX4-208ENST00000549040 RRP7BPQ9NSQ0 103 aa12.23□□□□□ -0.45
RFX4-208ENST00000549040 MLH3Q9UHC1 1453 aa12.22□□□□□ -0.45
RFX4-208ENST00000549040 PHF8Q9UPP1 1060 aa12.22□□□□□ -0.45
RFX4-208ENST00000549040 KDM5CP41229 1560 aa12.22□□□□□ -0.45
RFX4-208ENST00000549040 SHANK2Q9UPX8 1470 aa12.21□□□□□ -0.45
RFX4-208ENST00000549040 ROCK1Q13464 1354 aa12.21□□□□□ -0.45
RFX4-208ENST00000549040 AMER1Q5JTC6 1135 aaPredicted RBP12.21□□□□□ -0.45
RFX4-208ENST00000549040 ADGRL2O95490 1459 aa12.21□□□□□ -0.46
RFX4-208ENST00000549040 YEATS2Q9ULM3 1422 aa12.2□□□□□ -0.46
RFX4-208ENST00000549040 RICTORQ6R327 1708 aa12.2□□□□□ -0.46
RFX4-208ENST00000549040 MAST1Q9Y2H9 1570 aa12.2□□□□□ -0.46
RFX4-208ENST00000549040 CHGAP10645 457 aaKnown RBP12.19□□□□□ -0.46
RFX4-208ENST00000549040 NLRP6P59044 892 aa12.19□□□□□ -0.46
RFX4-208ENST00000549040 HS6ST3Q8IZP7 471 aa12.19□□□□□ -0.46
RFX4-208ENST00000549040 NAIPQ13075 1403 aa12.19□□□□□ -0.46
RFX4-208ENST00000549040 ANKRD30AQ9BXX3 1397 aa12.18□□□□□ -0.46
RFX4-208ENST00000549040 ZMYM4Q5VZL5 1548 aa12.18□□□□□ -0.46
RFX4-208ENST00000549040 MAGI2Q86UL8 1455 aa12.17□□□□□ -0.46
RFX4-208ENST00000549040 MS4A4AQ96JQ5 239 aa12.17□□□□□ -0.46
RFX4-208ENST00000549040 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.17□□□□□ -0.46
RFX4-208ENST00000549040 BOLA1Q9Y3E2 137 aa12.17□□□□□ -0.46
RFX4-208ENST00000549040 HFM1A2PYH4 1435 aa12.17□□□□□ -0.46
RFX4-208ENST00000549040 KIDINS220Q9ULH0 1771 aa12.17□□□□□ -0.46
RFX4-208ENST00000549040 INO80Q9ULG1 1556 aaPredicted RBP12.17□□□□□ -0.46
RFX4-208ENST00000549040 KIF15Q9NS87 1388 aa12.17□□□□□ -0.46
RFX4-208ENST00000549040 ATP7AQ04656 1500 aa12.16□□□□□ -0.46
RFX4-208ENST00000549040 ZFYVE16Q7Z3T8 1539 aa12.16□□□□□ -0.46
RFX4-208ENST00000549040 KDM6BO15054 1643 aa12.16□□□□□ -0.46
RFX4-208ENST00000549040 G3V3G9 751 aa12.16□□□□□ -0.46
RFX4-208ENST00000549040 MFRPQ9BY79 579 aa12.16□□□□□ -0.46
RFX4-208ENST00000549040 MYT1LQ9UL68 1186 aa12.16□□□□□ -0.46
RFX4-208ENST00000549040 DHX29Q7Z478 1369 aaKnown RBP12.16□□□□□ -0.46
RFX4-208ENST00000549040 CROCC2H7BZ55 1655 aa12.16□□□□□ -0.46
RFX4-208ENST00000549040 SETD5Q9C0A6 1442 aa12.15□□□□□ -0.46
RFX4-208ENST00000549040 SLAIN1Q8ND83 568 aa12.15□□□□□ -0.46
RFX4-208ENST00000549040 FBXO22Q8NEZ5 403 aa12.15□□□□□ -0.46
RFX4-208ENST00000549040 ATP10AO60312 1499 aa12.14□□□□□ -0.47
RFX4-208ENST00000549040 HECW2Q9P2P5 1572 aa12.13□□□□□ -0.47
RFX4-208ENST00000549040 HRCP23327 699 aa12.13□□□□□ -0.47
RFX4-208ENST00000549040 C3orf67Q6ZVT6 689 aa12.13□□□□□ -0.47
RFX4-208ENST00000549040 RTN4Q9NQC3 1192 aaKnown RBP12.13□□□□□ -0.47
RFX4-208ENST00000549040 ANKRD50Q9ULJ7 1429 aa12.12□□□□□ -0.47
RFX4-208ENST00000549040 RAB3GAP2Q9H2M9 1393 aa12.12□□□□□ -0.47
RFX4-208ENST00000549040 A2MP01023 1474 aa12.12□□□□□ -0.47
RFX4-208ENST00000549040 PLXNC1O60486 1568 aa12.12□□□□□ -0.47
RFX4-208ENST00000549040 DIP2CQ9Y2E4 1556 aa12.12□□□□□ -0.47
RFX4-208ENST00000549040 ABCA6Q8N139 1617 aa12.11□□□□□ -0.47
RFX4-208ENST00000549040 TMEM121BQ9BXQ6 578 aaPredicted RBP12.11□□□□□ -0.47
RFX4-208ENST00000549040 DUOX2Q9NRD8 1548 aa12.11□□□□□ -0.47
RFX4-208ENST00000549040 KIF3BO15066 747 aa12.1□□□□□ -0.47
RFX4-208ENST00000549040 ADGBQ8N7X0 1667 aa12.09□□□□□ -0.47
RFX4-208ENST00000549040 ERBINQ96RT1 1412 aa12.08□□□□□ -0.48
RFX4-208ENST00000549040 ARHGEF40Q8TER5 1519 aa12.07□□□□□ -0.48
RFX4-208ENST00000549040 SIGLEC1Q9BZZ2 1709 aa12.07□□□□□ -0.48
RFX4-208ENST00000549040 REREQ9P2R6 1566 aa12.06□□□□□ -0.48
RFX4-208ENST00000549040 MICALL2Q8IY33 904 aa12.06□□□□□ -0.48
RFX4-208ENST00000549040 AGLP35573 1532 aa12.06□□□□□ -0.48
RFX4-208ENST00000549040 GCC2Q8IWJ2 1684 aa12.04□□□□□ -0.48
RFX4-208ENST00000549040 GGT6Q6P531 493 aa12.04□□□□□ -0.48
RFX4-208ENST00000549040 TRIM52Q96A61 297 aa12.03□□□□□ -0.48
RFX4-208ENST00000549040 NUP155O75694 1391 aa12.03□□□□□ -0.48
RFX4-208ENST00000549040 NKX1-1Q15270 411 aaPredicted RBP12.02□□□□□ -0.49
RFX4-208ENST00000549040 MPHOSPH9Q99550 1183 aa12.02□□□□□ -0.49
RFX4-208ENST00000549040 MROH1Q8NDA8 1641 aa12.01□□□□□ -0.49
RFX4-208ENST00000549040 MLECQ14165 292 aa12.01□□□□□ -0.49
RFX4-208ENST00000549040 ARID4BQ4LE39 1312 aaPredicted RBP12.01□□□□□ -0.49
RFX4-208ENST00000549040 PZPP20742 1482 aa12.01□□□□□ -0.49
RFX4-208ENST00000549040 FAM163AQ96GL9 167 aaPredicted RBP12□□□□□ -0.49
RFX4-208ENST00000549040 EIF2AK4Q9P2K8 1649 aaKnown RBP12□□□□□ -0.49
RFX4-208ENST00000549040 BCORL1Q5H9F3 1711 aa12□□□□□ -0.49
RFX4-208ENST00000549040 ACIN1Q9UKV3 1341 aaKnown RBP11.99□□□□□ -0.49
RFX4-208ENST00000549040 VWDEQ8N2E2 1590 aa11.99□□□□□ -0.49
RFX4-208ENST00000549040 DEPDC5O75140 1603 aa11.98□□□□□ -0.49
RFX4-208ENST00000549040 RNF17Q9BXT8 1623 aaKnown RBP11.98□□□□□ -0.49
RFX4-208ENST00000549040 UNC13BO14795 1591 aa11.98□□□□□ -0.49
RFX4-208ENST00000549040 DHX57Q6P158 1386 aaKnown RBP11.98□□□□□ -0.49
RFX4-208ENST00000549040 SNPHO15079 494 aa11.98□□□□□ -0.49
RFX4-208ENST00000549040 PPP1R37O75864 691 aa11.98□□□□□ -0.49
RFX4-208ENST00000549040 KDM5DQ9BY66 1539 aa11.97□□□□□ -0.49
RFX4-208ENST00000549040 WASHC2CQ9Y4E1 1318 aa11.97□□□□□ -0.49
RFX4-208ENST00000549040 RYDENQ9NUL5 291 aaKnown RBP11.97□□□□□ -0.49
RFX4-208ENST00000549040 PRDM15P57071 1507 aaPredicted RBP11.96□□□□□ -0.5
RFX4-208ENST00000549040 KANK1Q14678 1352 aa11.95□□□□□ -0.5
RFX4-208ENST00000549040 ABCC3O15438 1527 aa11.95□□□□□ -0.5
RFX4-208ENST00000549040 LMTK2Q8IWU2 1503 aa11.95□□□□□ -0.5
RFX4-208ENST00000549040 FAM135AQ9P2D6 1515 aa11.95□□□□□ -0.5
RFX4-208ENST00000549040 TMEM92Q6UXU6 159 aa11.94□□□□□ -0.5
RFX4-208ENST00000549040 KDM4FA0A1W2PPD8 638 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms