RNA–Protein interactions for RNA: ENST00000548130.5

SMARCC2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 5

Gene SMARCC2, Length 1,238 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-205ENST00000548130 RAB3GAP2Q9H2M9 1393 aa13.24□□□□□ -0.29
SMARCC2-205ENST00000548130 CHGAP10645 457 aaKnown RBP13.24□□□□□ -0.29
SMARCC2-205ENST00000548130 E9PCH4 1651 aa13.24□□□□□ -0.29
SMARCC2-205ENST00000548130 PTPRTO14522 1441 aa13.22□□□□□ -0.29
SMARCC2-205ENST00000548130 MPHOSPH9Q99550 1183 aa13.22□□□□□ -0.29
SMARCC2-205ENST00000548130 PIK3C2BO00750 1634 aa13.21□□□□□ -0.29
SMARCC2-205ENST00000548130 LTKP29376 864 aa13.21□□□□□ -0.29
SMARCC2-205ENST00000548130 TXNDC2Q86VQ3 553 aa13.21□□□□□ -0.29
SMARCC2-205ENST00000548130 TMEM2Q9UHN6 1383 aa13.2□□□□□ -0.3
SMARCC2-205ENST00000548130 UBR1Q8IWV7 1749 aa13.19□□□□□ -0.3
SMARCC2-205ENST00000548130 ATXN8OSP0DMR3 200 aa13.19□□□□□ -0.3
SMARCC2-205ENST00000548130 POLA2Q14181 598 aa13.19□□□□□ -0.3
SMARCC2-205ENST00000548130 EID1Q9Y6B2 187 aa13.19□□□□□ -0.3
SMARCC2-205ENST00000548130 ADGRB3O60242 1522 aa13.18□□□□□ -0.3
SMARCC2-205ENST00000548130 NPHP4O75161 1426 aaPredicted RBP13.18□□□□□ -0.3
SMARCC2-205ENST00000548130 SCAF11Q99590 1463 aaKnown RBP13.17□□□□□ -0.3
SMARCC2-205ENST00000548130 ARHGAP23Q9P227 1491 aa13.17□□□□□ -0.3
SMARCC2-205ENST00000548130 NEURL4Q96JN8 1562 aa13.17□□□□□ -0.3
SMARCC2-205ENST00000548130 SLIT1O75093 1534 aa13.17□□□□□ -0.3
SMARCC2-205ENST00000548130 ZNF335Q9H4Z2 1342 aaPredicted RBP13.16□□□□□ -0.3
SMARCC2-205ENST00000548130 ACIN1Q9UKV3 1341 aaKnown RBP13.16□□□□□ -0.3
SMARCC2-205ENST00000548130 NUTM2DQ5VT03 806 aaPredicted RBP13.16□□□□□ -0.3
SMARCC2-205ENST00000548130 ATF5Q9Y2D1 282 aaPredicted RBP13.16□□□□□ -0.3
SMARCC2-205ENST00000548130 HRCP23327 699 aa13.15□□□□□ -0.3
SMARCC2-205ENST00000548130 MED14O60244 1454 aa13.15□□□□□ -0.3
SMARCC2-205ENST00000548130 RIMS2Q9UQ26 1411 aa13.14□□□□□ -0.31
SMARCC2-205ENST00000548130 TRPM2O94759 1503 aa13.14□□□□□ -0.31
SMARCC2-205ENST00000548130 PPP1R15AO75807 674 aaPredicted RBP13.14□□□□□ -0.31
SMARCC2-205ENST00000548130 SPHKAPQ2M3C7 1700 aa13.13□□□□□ -0.31
SMARCC2-205ENST00000548130 ZNF326Q5BKZ1 582 aaKnown RBP13.13□□□□□ -0.31
SMARCC2-205ENST00000548130 CERKQ8TCT0 537 aa13.13□□□□□ -0.31
SMARCC2-205ENST00000548130 BCANQ96GW7 911 aa13.13□□□□□ -0.31
SMARCC2-205ENST00000548130 TMEM131LA2VDJ0 1609 aa13.13□□□□□ -0.31
SMARCC2-205ENST00000548130 ZFYVE9O95405 1425 aa13.13□□□□□ -0.31
SMARCC2-205ENST00000548130 HDGFP51858 240 aaKnown RBP13.12□□□□□ -0.31
SMARCC2-205ENST00000548130 TRIM26Q12899 539 aaPredicted RBP13.12□□□□□ -0.31
SMARCC2-205ENST00000548130 POLR1AO95602 1720 aaPredicted RBP13.12□□□□□ -0.31
SMARCC2-205ENST00000548130 CLTCL1P53675 1640 aa13.12□□□□□ -0.31
SMARCC2-205ENST00000548130 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.11□□□□□ -0.31
SMARCC2-205ENST00000548130 SLC26A8Q96RN1 970 aa13.11□□□□□ -0.31
SMARCC2-205ENST00000548130 KDM5AP29375 1690 aaKnown RBP13.11□□□□□ -0.31
SMARCC2-205ENST00000548130 CCDC144AA2RUR9 1427 aa13.1□□□□□ -0.31
SMARCC2-205ENST00000548130 IQGAP1P46940 1657 aa13.09□□□□□ -0.31
SMARCC2-205ENST00000548130 LTBP4Q8N2S1 1624 aa13.09□□□□□ -0.31
SMARCC2-205ENST00000548130 MYO5BQ9ULV0 1848 aa13.09□□□□□ -0.31
SMARCC2-205ENST00000548130 PLEKHG1Q9ULL1 1385 aa13.08□□□□□ -0.31
SMARCC2-205ENST00000548130 RGL3Q3MIN7 710 aa13.07□□□□□ -0.32
SMARCC2-205ENST00000548130 ZBTB12Q9Y330 459 aaPredicted RBP13.07□□□□□ -0.32
SMARCC2-205ENST00000548130 ANKRD30BQ9BXX2 1392 aa13.06□□□□□ -0.32
SMARCC2-205ENST00000548130 RBM42Q9BTD8 480 aaKnown RBP13.03□□□□□ -0.32
SMARCC2-205ENST00000548130 TBX22Q9Y458 520 aa13.03□□□□□ -0.32
SMARCC2-205ENST00000548130 RPGRIP1LQ68CZ1 1315 aa13.03□□□□□ -0.32
SMARCC2-205ENST00000548130 SPATA31E1Q6ZUB1 1445 aa13.03□□□□□ -0.32
SMARCC2-205ENST00000548130 ADAMTS13Q76LX8 1427 aa13.03□□□□□ -0.32
SMARCC2-205ENST00000548130 NEXMIFQ5QGS0 1516 aa13.03□□□□□ -0.32
SMARCC2-205ENST00000548130 KCNA6P17658 529 aa13.02□□□□□ -0.33
SMARCC2-205ENST00000548130 ILDR2Q71H61 639 aa13.02□□□□□ -0.33
SMARCC2-205ENST00000548130 KIF1BO60333 1816 aa13.02□□□□□ -0.33
SMARCC2-205ENST00000548130 VGFO15240 615 aaPredicted RBP13.01□□□□□ -0.33
SMARCC2-205ENST00000548130 CPS1P31327 1500 aa13.01□□□□□ -0.33
SMARCC2-205ENST00000548130 ADGRF5Q8IZF2 1346 aa13□□□□□ -0.33
SMARCC2-205ENST00000548130 RBM33Q96EV2 1170 aaKnown RBP12.99□□□□□ -0.33
SMARCC2-205ENST00000548130 LRRC7Q96NW7 1537 aa12.98□□□□□ -0.33
SMARCC2-205ENST00000548130 DISP3Q9P2K9 1392 aa12.98□□□□□ -0.33
SMARCC2-205ENST00000548130 PROSER2Q86WR7 435 aaPredicted RBP12.98□□□□□ -0.33
SMARCC2-205ENST00000548130 STRCP1A6NGW2 1772 aa12.98□□□□□ -0.33
SMARCC2-205ENST00000548130 METP08581 1390 aa12.97□□□□□ -0.33
SMARCC2-205ENST00000548130 UBAP1LF5GYI3 381 aa12.97□□□□□ -0.33
SMARCC2-205ENST00000548130 PCGF6Q9BYE7 350 aa12.97□□□□□ -0.33
SMARCC2-205ENST00000548130 IQSEC2Q5JU85 1478 aa12.97□□□□□ -0.33
SMARCC2-205ENST00000548130 PTPRUQ92729 1446 aa12.96□□□□□ -0.33
SMARCC2-205ENST00000548130 TMEM94Q12767 1356 aa12.96□□□□□ -0.33
SMARCC2-205ENST00000548130 SETBP1Q9Y6X0 1596 aa12.96□□□□□ -0.33
SMARCC2-205ENST00000548130 AMOTL2Q9Y2J4 779 aa12.96□□□□□ -0.33
SMARCC2-205ENST00000548130 DHX57Q6P158 1386 aaKnown RBP12.95□□□□□ -0.34
SMARCC2-205ENST00000548130 PIK3R4Q99570 1358 aa12.95□□□□□ -0.34
SMARCC2-205ENST00000548130 NRXN3Q9Y4C0 1643 aa12.95□□□□□ -0.34
SMARCC2-205ENST00000548130 DIP2AQ14689 1571 aa12.95□□□□□ -0.34
SMARCC2-205ENST00000548130 KDM2AQ9Y2K7 1162 aa12.95□□□□□ -0.34
SMARCC2-205ENST00000548130 SIN3AQ96ST3 1273 aa12.94□□□□□ -0.34
SMARCC2-205ENST00000548130 SOCS7O14512 581 aa12.93□□□□□ -0.34
SMARCC2-205ENST00000548130 DCAF11Q8TEB1 546 aa12.93□□□□□ -0.34
SMARCC2-205ENST00000548130 PPLO60437 1756 aa12.93□□□□□ -0.34
SMARCC2-205ENST00000548130 NWD1Q149M9 1564 aa12.93□□□□□ -0.34
SMARCC2-205ENST00000548130 NKTRP30414 1462 aaKnown RBP12.92□□□□□ -0.34
SMARCC2-205ENST00000548130 PIP4K2BP78356 416 aa12.92□□□□□ -0.34
SMARCC2-205ENST00000548130 NEUROD1Q13562 356 aa12.92□□□□□ -0.34
SMARCC2-205ENST00000548130 TOM1O60784 492 aa12.91□□□□□ -0.34
SMARCC2-205ENST00000548130 CFAP70Q5T0N1 1121 aa12.91□□□□□ -0.34
SMARCC2-205ENST00000548130 ALKQ9UM73 1620 aa12.91□□□□□ -0.34
SMARCC2-205ENST00000548130 PIK3C2GO75747 1445 aa12.9□□□□□ -0.34
SMARCC2-205ENST00000548130 TMEM132EQ6IEE7 984 aa12.9□□□□□ -0.34
SMARCC2-205ENST00000548130 C14orf37Q86TY3 774 aa12.9□□□□□ -0.34
SMARCC2-205ENST00000548130 MYOM2P54296 1465 aa12.9□□□□□ -0.34
SMARCC2-205ENST00000548130 CHD2O14647 1828 aaKnown RBP12.9□□□□□ -0.34
SMARCC2-205ENST00000548130 C14orf93Q9H972 538 aaKnown RBP12.89□□□□□ -0.35
SMARCC2-205ENST00000548130 STK26Q9P289 416 aa12.89□□□□□ -0.35
SMARCC2-205ENST00000548130 NRXN1Q9ULB1 1477 aa12.88□□□□□ -0.35
SMARCC2-205ENST00000548130 IFT172Q9UG01 1749 aa12.88□□□□□ -0.35
SMARCC2-205ENST00000548130 MSH6P52701 1360 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms