RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 SPDYE1Q8NFV5 336 aaPredicted RBP10.27□□□□□ -0.77
SCAF11-211ENST00000547950 MROH1Q8NDA8 1641 aa10.26□□□□□ -0.77
SCAF11-211ENST00000547950 EIF2AK4Q9P2K8 1649 aaKnown RBP10.26□□□□□ -0.77
SCAF11-211ENST00000547950 ARHGAP31Q2M1Z3 1444 aa10.26□□□□□ -0.77
SCAF11-211ENST00000547950 IQSEC2Q5JU85 1478 aa10.26□□□□□ -0.77
SCAF11-211ENST00000547950 SPATA31D1Q6ZQQ2 1576 aa10.26□□□□□ -0.77
SCAF11-211ENST00000547950 DISP3Q9P2K9 1392 aa10.26□□□□□ -0.77
SCAF11-211ENST00000547950 ANKRD50Q9ULJ7 1429 aa10.25□□□□□ -0.77
SCAF11-211ENST00000547950 HAX1O00165 279 aa10.24□□□□□ -0.77
SCAF11-211ENST00000547950 BCANQ96GW7 911 aa10.24□□□□□ -0.77
SCAF11-211ENST00000547950 MED14O60244 1454 aa10.23□□□□□ -0.77
SCAF11-211ENST00000547950 NEURL4Q96JN8 1562 aa10.23□□□□□ -0.77
SCAF11-211ENST00000547950 SLC52A1Q9NWF4 448 aa10.23□□□□□ -0.77
SCAF11-211ENST00000547950 ADGRL2O95490 1459 aa10.23□□□□□ -0.77
SCAF11-211ENST00000547950 PRDM15P57071 1507 aaPredicted RBP10.23□□□□□ -0.77
SCAF11-211ENST00000547950 ZC3H13Q5T200 1668 aaKnown RBP10.22□□□□□ -0.77
SCAF11-211ENST00000547950 CHGAP10645 457 aaKnown RBP10.22□□□□□ -0.77
SCAF11-211ENST00000547950 SLC26A8Q96RN1 970 aa10.22□□□□□ -0.77
SCAF11-211ENST00000547950 TMEM2Q9UHN6 1383 aa10.22□□□□□ -0.77
SCAF11-211ENST00000547950 SCAF11Q99590 1463 aaKnown RBP10.22□□□□□ -0.77
SCAF11-211ENST00000547950 HSPA1LP34931 641 aa10.21□□□□□ -0.77
SCAF11-211ENST00000547950 CPS1P31327 1500 aa10.21□□□□□ -0.78
SCAF11-211ENST00000547950 CROCC2H7BZ55 1655 aa10.21□□□□□ -0.78
SCAF11-211ENST00000547950 CEP152O94986 1710 aa10.2□□□□□ -0.78
SCAF11-211ENST00000547950 ILDR2Q71H61 639 aa10.2□□□□□ -0.78
SCAF11-211ENST00000547950 VWDEQ8N2E2 1590 aa10.19□□□□□ -0.78
SCAF11-211ENST00000547950 LMTK2Q8IWU2 1503 aa10.19□□□□□ -0.78
SCAF11-211ENST00000547950 NUP155O75694 1391 aa10.19□□□□□ -0.78
SCAF11-211ENST00000547950 ROCK1Q13464 1354 aa10.19□□□□□ -0.78
SCAF11-211ENST00000547950 PPP1R15AO75807 674 aaPredicted RBP10.19□□□□□ -0.78
SCAF11-211ENST00000547950 PRKAR2AP13861 404 aaKnown RBP10.19□□□□□ -0.78
SCAF11-211ENST00000547950 HDGFP51858 240 aaKnown RBP10.19□□□□□ -0.78
SCAF11-211ENST00000547950 SP7Q8TDD2 431 aaPredicted RBP10.19□□□□□ -0.78
SCAF11-211ENST00000547950 DEPDC5O75140 1603 aa10.18□□□□□ -0.78
SCAF11-211ENST00000547950 ARHGAP23Q9P227 1491 aa10.18□□□□□ -0.78
SCAF11-211ENST00000547950 NOS1P29475 1434 aa10.18□□□□□ -0.78
SCAF11-211ENST00000547950 RBM33Q96EV2 1170 aaKnown RBP10.18□□□□□ -0.78
SCAF11-211ENST00000547950 SLIT1O75093 1534 aa10.17□□□□□ -0.78
SCAF11-211ENST00000547950 KCNA6P17658 529 aa10.17□□□□□ -0.78
SCAF11-211ENST00000547950 NUTM2DQ5VT03 806 aaPredicted RBP10.17□□□□□ -0.78
SCAF11-211ENST00000547950 PROSER2Q86WR7 435 aaPredicted RBP10.17□□□□□ -0.78
SCAF11-211ENST00000547950 POLR1AO95602 1720 aaPredicted RBP10.16□□□□□ -0.78
SCAF11-211ENST00000547950 CFAP65Q6ZU64 1925 aaKnown RBP10.16□□□□□ -0.78
SCAF11-211ENST00000547950 EFCAB6Q5THR3 1501 aa10.16□□□□□ -0.78
SCAF11-211ENST00000547950 LRRC7Q96NW7 1537 aa10.16□□□□□ -0.78
SCAF11-211ENST00000547950 IQGAP1P46940 1657 aa10.15□□□□□ -0.78
SCAF11-211ENST00000547950 UBR1Q8IWV7 1749 aa10.15□□□□□ -0.78
SCAF11-211ENST00000547950 PIK3C2BO00750 1634 aa10.15□□□□□ -0.79
SCAF11-211ENST00000547950 SYNMO15061 1565 aa10.14□□□□□ -0.79
SCAF11-211ENST00000547950 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.14□□□□□ -0.79
SCAF11-211ENST00000547950 RPRD2Q5VT52 1461 aaKnown RBP10.14□□□□□ -0.79
SCAF11-211ENST00000547950 RIMS2Q9UQ26 1411 aa10.13□□□□□ -0.79
SCAF11-211ENST00000547950 TMEM94Q12767 1356 aa10.13□□□□□ -0.79
SCAF11-211ENST00000547950 PRR29P0C7W0 189 aa10.12□□□□□ -0.79
SCAF11-211ENST00000547950 ZNF326Q5BKZ1 582 aaKnown RBP10.12□□□□□ -0.79
SCAF11-211ENST00000547950 TRIM52Q96A61 297 aa10.12□□□□□ -0.79
SCAF11-211ENST00000547950 CHADLQ6NUI6 762 aa10.11□□□□□ -0.79
SCAF11-211ENST00000547950 TBX22Q9Y458 520 aa10.11□□□□□ -0.79
SCAF11-211ENST00000547950 SOCS7O14512 581 aa10.1□□□□□ -0.79
SCAF11-211ENST00000547950 C14orf37Q86TY3 774 aa10.1□□□□□ -0.79
SCAF11-211ENST00000547950 ADGRB3O60242 1522 aa10.1□□□□□ -0.79
SCAF11-211ENST00000547950 PLEKHG1Q9ULL1 1385 aa10.1□□□□□ -0.79
SCAF11-211ENST00000547950 ZFYVE9O95405 1425 aa10.09□□□□□ -0.79
SCAF11-211ENST00000547950 RRBP1Q9P2E9 1410 aaKnown RBP10.09□□□□□ -0.79
SCAF11-211ENST00000547950 TET3O43151 1660 aa10.09□□□□□ -0.79
SCAF11-211ENST00000547950 SLAIN2Q9P270 581 aa10.08□□□□□ -0.8
SCAF11-211ENST00000547950 UNC13BO14795 1591 aa10.08□□□□□ -0.8
SCAF11-211ENST00000547950 STRCP1A6NGW2 1772 aa10.08□□□□□ -0.8
SCAF11-211ENST00000547950 ALKQ9UM73 1620 aa10.07□□□□□ -0.8
SCAF11-211ENST00000547950 EVX2Q03828 476 aa10.07□□□□□ -0.8
SCAF11-211ENST00000547950 AMOTL2Q9Y2J4 779 aa10.07□□□□□ -0.8
SCAF11-211ENST00000547950 NAIPQ13075 1403 aa10.07□□□□□ -0.8
SCAF11-211ENST00000547950 MSH6P52701 1360 aa10.06□□□□□ -0.8
SCAF11-211ENST00000547950 FAM135BQ49AJ0 1406 aa10.06□□□□□ -0.8
SCAF11-211ENST00000547950 KDM5AP29375 1690 aaKnown RBP10.05□□□□□ -0.8
SCAF11-211ENST00000547950 TMEM131LA2VDJ0 1609 aa10.04□□□□□ -0.8
SCAF11-211ENST00000547950 IQGAP3Q86VI3 1631 aa10.04□□□□□ -0.8
SCAF11-211ENST00000547950 E9PCH4 1651 aa10.04□□□□□ -0.8
SCAF11-211ENST00000547950 ATF3P18847 181 aa10.04□□□□□ -0.8
SCAF11-211ENST00000547950 ADAMTS13Q76LX8 1427 aa10.04□□□□□ -0.8
SCAF11-211ENST00000547950 C19orf44Q9H6X5 657 aa10.03□□□□□ -0.8
SCAF11-211ENST00000547950 CADPS2Q86UW7 1296 aa10.02□□□□□ -0.81
SCAF11-211ENST00000547950 NKTRP30414 1462 aaKnown RBP10.02□□□□□ -0.81
SCAF11-211ENST00000547950 GCC2Q8IWJ2 1684 aa10.02□□□□□ -0.81
SCAF11-211ENST00000547950 PIK3R4Q99570 1358 aa10.01□□□□□ -0.81
SCAF11-211ENST00000547950 HFM1A2PYH4 1435 aa10.01□□□□□ -0.81
SCAF11-211ENST00000547950 SPDYE4A6NLX3 237 aa10.01□□□□□ -0.81
SCAF11-211ENST00000547950 VGFO15240 615 aaPredicted RBP10.01□□□□□ -0.81
SCAF11-211ENST00000547950 METP08581 1390 aa10.01□□□□□ -0.81
SCAF11-211ENST00000547950 PTPRUQ92729 1446 aa10□□□□□ -0.81
SCAF11-211ENST00000547950 MPHOSPH9Q99550 1183 aa10□□□□□ -0.81
SCAF11-211ENST00000547950 MED1Q15648 1581 aaPredicted RBP10□□□□□ -0.81
SCAF11-211ENST00000547950 NCOA3Q9Y6Q9 1424 aa9.99□□□□□ -0.81
SCAF11-211ENST00000547950 RGL3Q3MIN7 710 aa9.99□□□□□ -0.81
SCAF11-211ENST00000547950 RGS17Q9UGC6 210 aaPredicted RBP9.99□□□□□ -0.81
SCAF11-211ENST00000547950 NWD1Q149M9 1564 aa9.98□□□□□ -0.81
SCAF11-211ENST00000547950 RPGRIP1LQ68CZ1 1315 aa9.98□□□□□ -0.81
SCAF11-211ENST00000547950 C19orf67A6NJJ6 358 aa9.97□□□□□ -0.81
SCAF11-211ENST00000547950 XIRP1Q702N8 1843 aaKnown RBP9.96□□□□□ -0.81
SCAF11-211ENST00000547950 BRINP3Q76B58 766 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms