RNA–Protein interactions for RNA: ENST00000547374.5

BRF1-210, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5

Gene BRF1, Length 3,809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-210ENST00000547374 FAM135AQ9P2D6 1515 aa16.71■□□□□ 0.27
BRF1-210ENST00000547374 UPF2Q9HAU5 1272 aaKnown RBP16.71■□□□□ 0.27
BRF1-210ENST00000547374 CCDC141Q6ZP82 1450 aa16.71■□□□□ 0.26
BRF1-210ENST00000547374 SEC24BO95487 1268 aa16.7■□□□□ 0.26
BRF1-210ENST00000547374 FTSJ3Q8IY81 847 aaKnown RBP16.7■□□□□ 0.26
BRF1-210ENST00000547374 A2MP01023 1474 aa16.69■□□□□ 0.26
BRF1-210ENST00000547374 C8orf34Q49A92 452 aa16.69■□□□□ 0.26
BRF1-210ENST00000547374 USP35Q9P2H5 1018 aa16.69■□□□□ 0.26
BRF1-210ENST00000547374 ADGRL2O95490 1459 aa16.68■□□□□ 0.26
BRF1-210ENST00000547374 EIF4G3O43432 1585 aaKnown RBP16.68■□□□□ 0.26
BRF1-210ENST00000547374 E9PSI1 815 aa16.67■□□□□ 0.26
BRF1-210ENST00000547374 CEP170Q5SW79 1584 aa16.67■□□□□ 0.26
BRF1-210ENST00000547374 ADGRF5Q8IZF2 1346 aa16.67■□□□□ 0.26
BRF1-210ENST00000547374 SYCP2Q9BX26 1530 aa16.67■□□□□ 0.26
BRF1-210ENST00000547374 TCP11L2Q8N4U5 519 aa16.66■□□□□ 0.26
BRF1-210ENST00000547374 MFAP1P55081 439 aaKnown RBP16.66■□□□□ 0.26
BRF1-210ENST00000547374 WASHC2CQ9Y4E1 1318 aa16.66■□□□□ 0.26
BRF1-210ENST00000547374 MTHFSP49914 203 aa16.65■□□□□ 0.26
BRF1-210ENST00000547374 TSR2Q969E8 191 aaKnown RBP16.65■□□□□ 0.26
BRF1-210ENST00000547374 ITSN2Q9NZM3 1697 aa16.65■□□□□ 0.26
BRF1-210ENST00000547374 CARD14Q9BXL6 1004 aa16.65■□□□□ 0.26
BRF1-210ENST00000547374 BECN1Q14457 450 aa16.64■□□□□ 0.25
BRF1-210ENST00000547374 PLA2R1Q13018 1463 aa16.64■□□□□ 0.25
BRF1-210ENST00000547374 WWC1Q8IX03 1113 aa16.63■□□□□ 0.25
BRF1-210ENST00000547374 POGKQ9P215 609 aa16.63■□□□□ 0.25
BRF1-210ENST00000547374 FOXD4L1Q9NU39 408 aa16.62■□□□□ 0.25
BRF1-210ENST00000547374 SRPK2P78362 688 aaKnown RBP16.62■□□□□ 0.25
BRF1-210ENST00000547374 ITPRIPQ8IWB1 547 aa16.62■□□□□ 0.25
BRF1-210ENST00000547374 KDM2BQ8NHM5 1336 aa16.62■□□□□ 0.25
BRF1-210ENST00000547374 MAGI2Q86UL8 1455 aa16.61■□□□□ 0.25
BRF1-210ENST00000547374 COL17A1Q9UMD9 1497 aaPredicted RBP16.61■□□□□ 0.25
BRF1-210ENST00000547374 ELL2O00472 640 aaPredicted RBP16.61■□□□□ 0.25
BRF1-210ENST00000547374 CFAP53Q96M91 514 aa16.61■□□□□ 0.25
BRF1-210ENST00000547374 ARHGEF12Q9NZN5 1544 aa16.6■□□□□ 0.25
BRF1-210ENST00000547374 ABCC10Q5T3U5 1492 aa16.6■□□□□ 0.25
BRF1-210ENST00000547374 CABP2Q9NPB3 220 aa16.6■□□□□ 0.25
BRF1-210ENST00000547374 RLBP1P12271 317 aa16.6■□□□□ 0.25
BRF1-210ENST00000547374 SMC4Q9NTJ3 1288 aa16.6■□□□□ 0.25
BRF1-210ENST00000547374 GGNBP2Q9H3C7 697 aa16.59■□□□□ 0.25
BRF1-210ENST00000547374 PDZRN3Q9UPQ7 1066 aa16.59■□□□□ 0.25
BRF1-210ENST00000547374 KANK1Q14678 1352 aa16.59■□□□□ 0.25
BRF1-210ENST00000547374 HSP90AA1P07900 732 aaKnown RBP16.58■□□□□ 0.25
BRF1-210ENST00000547374 ADGBQ8N7X0 1667 aa16.58■□□□□ 0.24
BRF1-210ENST00000547374 PCDHB15Q9Y5E8 787 aa16.58■□□□□ 0.24
BRF1-210ENST00000547374 CGNL1Q0VF96 1302 aa16.57■□□□□ 0.24
BRF1-210ENST00000547374 SCAPERQ9BY12 1400 aa16.57■□□□□ 0.24
BRF1-210ENST00000547374 TRAPPC8Q9Y2L5 1435 aa16.56■□□□□ 0.24
BRF1-210ENST00000547374 FBLN1P23142 703 aa16.56■□□□□ 0.24
BRF1-210ENST00000547374 EIF3AQ14152 1382 aaKnown RBP16.55■□□□□ 0.24
BRF1-210ENST00000547374 CDC42BPAQ5VT25 1732 aa16.54■□□□□ 0.24
BRF1-210ENST00000547374 MAPK8IP3Q9UPT6 1336 aa16.54■□□□□ 0.24
BRF1-210ENST00000547374 BLMP54132 1417 aaPredicted RBP16.54■□□□□ 0.24
BRF1-210ENST00000547374 KDM5DQ9BY66 1539 aa16.54■□□□□ 0.24
BRF1-210ENST00000547374 STAG3Q9UJ98 1225 aa16.54■□□□□ 0.24
BRF1-210ENST00000547374 RUNDC1Q96C34 613 aa16.53■□□□□ 0.24
BRF1-210ENST00000547374 RWDD1Q9H446 243 aaPredicted RBP16.53■□□□□ 0.24
BRF1-210ENST00000547374 RARSP54136 660 aaKnown RBP16.53■□□□□ 0.24
BRF1-210ENST00000547374 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.52■□□□□ 0.24
BRF1-210ENST00000547374 APBB1O00213 710 aa16.52■□□□□ 0.24
BRF1-210ENST00000547374 MINK1Q8N4C8 1332 aaPredicted RBP16.52■□□□□ 0.23
BRF1-210ENST00000547374 EXOSC9Q06265 439 aaKnown RBP16.52■□□□□ 0.23
BRF1-210ENST00000547374 SHANK2Q9UPX8 1470 aa16.52■□□□□ 0.23
BRF1-210ENST00000547374 GPRASP1Q5JY77 1395 aa16.51■□□□□ 0.23
BRF1-210ENST00000547374 NKTRP30414 1462 aaKnown RBP16.51■□□□□ 0.23
BRF1-210ENST00000547374 PMFBP1Q8TBY8 1022 aa16.51■□□□□ 0.23
BRF1-210ENST00000547374 POLR1AO95602 1720 aaPredicted RBP16.51■□□□□ 0.23
BRF1-210ENST00000547374 NUP160Q12769 1436 aa16.5■□□□□ 0.23
BRF1-210ENST00000547374 SAMD9LQ8IVG5 1584 aa16.5■□□□□ 0.23
BRF1-210ENST00000547374 LNPKQ9C0E8 428 aa16.5■□□□□ 0.23
BRF1-210ENST00000547374 NSD3Q9BZ95 1437 aa16.5■□□□□ 0.23
BRF1-210ENST00000547374 ZMYM4Q5VZL5 1548 aa16.5■□□□□ 0.23
BRF1-210ENST00000547374 NPM1P06748 294 aaKnown RBP eCLIP16.5■□□□□ 0.23
BRF1-210ENST00000547374 PLPPR3Q6T4P5 718 aa16.49■□□□□ 0.23
BRF1-210ENST00000547374 SOX12O15370 315 aa16.49■□□□□ 0.23
BRF1-210ENST00000547374 ZNF521Q96K83 1311 aa16.49■□□□□ 0.23
BRF1-210ENST00000547374 PRKCSHP14314 528 aaPredicted RBP16.49■□□□□ 0.23
BRF1-210ENST00000547374 PDE3AQ14432 1141 aa16.49■□□□□ 0.23
BRF1-210ENST00000547374 C1orf115Q9H7X2 142 aa16.49■□□□□ 0.23
BRF1-210ENST00000547374 DZIP1LQ8IYY4 767 aaKnown RBP16.48■□□□□ 0.23
BRF1-210ENST00000547374 MYH16Q9H6N6 1097 aa16.48■□□□□ 0.23
BRF1-210ENST00000547374 WDR7Q9Y4E6 1490 aa16.48■□□□□ 0.23
BRF1-210ENST00000547374 ZKSCAN2Q63HK3 967 aa16.48■□□□□ 0.23
BRF1-210ENST00000547374 SLC24A1O60721 1099 aa16.47■□□□□ 0.23
BRF1-210ENST00000547374 SCAF11Q99590 1463 aaKnown RBP16.46■□□□□ 0.23
BRF1-210ENST00000547374 THUMPD2Q9BTF0 503 aaKnown RBP16.46■□□□□ 0.23
BRF1-210ENST00000547374 HMOX1P09601 288 aa16.46■□□□□ 0.23
BRF1-210ENST00000547374 CFAP65Q6ZU64 1925 aaKnown RBP16.45■□□□□ 0.22
BRF1-210ENST00000547374 TBC1D2Q9BYX2 928 aa16.45■□□□□ 0.22
BRF1-210ENST00000547374 RIPK4P57078 832 aa16.45■□□□□ 0.22
BRF1-210ENST00000547374 ABCA8O94911 1581 aa16.45■□□□□ 0.22
BRF1-210ENST00000547374 TPRNQ4KMQ1 711 aa16.45■□□□□ 0.22
BRF1-210ENST00000547374 ASXL1Q8IXJ9 1541 aa16.44■□□□□ 0.22
BRF1-210ENST00000547374 C22orf23Q9BZE7 217 aa16.43■□□□□ 0.22
BRF1-210ENST00000547374 NOB1Q9ULX3 412 aaKnown RBP16.43■□□□□ 0.22
BRF1-210ENST00000547374 TRPM1Q7Z4N2 1603 aa16.43■□□□□ 0.22
BRF1-210ENST00000547374 CROCC2H7BZ55 1655 aa16.43■□□□□ 0.22
BRF1-210ENST00000547374 MLECQ14165 292 aa16.42■□□□□ 0.22
BRF1-210ENST00000547374 NAP1L5Q96NT1 182 aaPredicted RBP16.42■□□□□ 0.22
BRF1-210ENST00000547374 HSP90AB1P08238 724 aaKnown RBP16.42■□□□□ 0.22
BRF1-210ENST00000547374 HSCBQ8IWL3 235 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms