RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 RCCD1A6NED2 376 aa12.18□□□□□ -0.46
CCDC38-204ENST00000546816 GFRA3O60609 400 aa12.18□□□□□ -0.46
CCDC38-204ENST00000546816 PCDHB3Q9Y5E6 796 aa12.18□□□□□ -0.46
CCDC38-204ENST00000546816 LCE2BO14633 110 aa12.17□□□□□ -0.46
CCDC38-204ENST00000546816 FCHSD2O94868 740 aa12.17□□□□□ -0.46
CCDC38-204ENST00000546816 TMUB1Q9BVT8 246 aa12.16□□□□□ -0.46
CCDC38-204ENST00000546816 BLOC1S3Q6QNY0 202 aa12.15□□□□□ -0.46
CCDC38-204ENST00000546816 GGCXP38435 758 aa12.14□□□□□ -0.47
CCDC38-204ENST00000546816 NRG2O14511 850 aaPredicted RBP12.13□□□□□ -0.47
CCDC38-204ENST00000546816 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.12□□□□□ -0.47
CCDC38-204ENST00000546816 ACTN4O43707 911 aaKnown RBP12.12□□□□□ -0.47
CCDC38-204ENST00000546816 TESPA1A2RU30 521 aaPredicted RBP12.11□□□□□ -0.47
CCDC38-204ENST00000546816 SLC10A3P09131 477 aa12.11□□□□□ -0.47
CCDC38-204ENST00000546816 PXYLP1Q8TE99 480 aa12.11□□□□□ -0.47
CCDC38-204ENST00000546816 CFHP08603 1231 aa12.09□□□□□ -0.47
CCDC38-204ENST00000546816 PLCB2Q00722 1185 aa12.09□□□□□ -0.47
CCDC38-204ENST00000546816 KMT5BQ4FZB7 885 aa12.09□□□□□ -0.47
CCDC38-204ENST00000546816 TRAF7Q6Q0C0 670 aa12.09□□□□□ -0.47
CCDC38-204ENST00000546816 TLL1O43897 1013 aa12.08□□□□□ -0.48
CCDC38-204ENST00000546816 OATP04181 439 aa12.08□□□□□ -0.48
CCDC38-204ENST00000546816 HIC1Q14526 733 aa12.08□□□□□ -0.48
CCDC38-204ENST00000546816 RNF223E7ERA6 249 aa12.07□□□□□ -0.48
CCDC38-204ENST00000546816 RBM26Q5T8P6 1007 aaKnown RBP12.06□□□□□ -0.48
CCDC38-204ENST00000546816 EMID1Q96A84 441 aaPredicted RBP12.06□□□□□ -0.48
CCDC38-204ENST00000546816 METTL3Q86U44 580 aaKnown RBP12.05□□□□□ -0.48
CCDC38-204ENST00000546816 PDZRN3Q9UPQ7 1066 aa12.04□□□□□ -0.48
CCDC38-204ENST00000546816 GPR37O15354 613 aa12.03□□□□□ -0.48
CCDC38-204ENST00000546816 FECHP22830 423 aa12.02□□□□□ -0.49
CCDC38-204ENST00000546816 SLC19A1P41440 591 aa12.01□□□□□ -0.49
CCDC38-204ENST00000546816 SMYD5Q6GMV2 418 aa12.01□□□□□ -0.49
CCDC38-204ENST00000546816 ANKLE1Q8NAG6 615 aa12.01□□□□□ -0.49
CCDC38-204ENST00000546816 GNPATO15228 680 aa12□□□□□ -0.49
CCDC38-204ENST00000546816 S1PR4O95977 384 aa12□□□□□ -0.49
CCDC38-204ENST00000546816 PPEF1O14829 653 aaPredicted RBP11.99□□□□□ -0.49
CCDC38-204ENST00000546816 NR1I2O75469 434 aa11.99□□□□□ -0.49
CCDC38-204ENST00000546816 ADH1BP00325 375 aa11.99□□□□□ -0.49
CCDC38-204ENST00000546816 TRIM67Q6ZTA4 783 aa11.99□□□□□ -0.49
CCDC38-204ENST00000546816 SPRYD7Q5W111 196 aa11.97□□□□□ -0.49
CCDC38-204ENST00000546816 RSPH4AQ5TD94 716 aa11.96□□□□□ -0.49
CCDC38-204ENST00000546816 SCUBE3Q8IX30 993 aa11.96□□□□□ -0.49
CCDC38-204ENST00000546816 LIAT1Q6ZQX7 453 aa11.95□□□□□ -0.5
CCDC38-204ENST00000546816 DAXXQ9UER7 740 aaPredicted RBP11.95□□□□□ -0.5
CCDC38-204ENST00000546816 PUS10Q3MIT2 529 aaKnown RBP11.94□□□□□ -0.5
CCDC38-204ENST00000546816 ZNF598Q86UK7 904 aaKnown RBP11.94□□□□□ -0.5
CCDC38-204ENST00000546816 SLC6A16Q9GZN6 736 aa11.93□□□□□ -0.5
CCDC38-204ENST00000546816 PRR20EP86478 221 aa11.9□□□□□ -0.5
CCDC38-204ENST00000546816 PRR20CP86479 221 aa11.9□□□□□ -0.5
CCDC38-204ENST00000546816 PRR20DP86480 221 aa11.9□□□□□ -0.5
CCDC38-204ENST00000546816 PRR20BP86481 221 aa11.9□□□□□ -0.5
CCDC38-204ENST00000546816 PRR20AP86496 221 aa11.9□□□□□ -0.5
CCDC38-204ENST00000546816 PLA2G2CQ5R387 149 aa11.9□□□□□ -0.5
CCDC38-204ENST00000546816 NLRP7Q8WX94 980 aa11.9□□□□□ -0.5
CCDC38-204ENST00000546816 PHOX2BQ99453 314 aa11.9□□□□□ -0.5
CCDC38-204ENST00000546816 MORN1Q5T089 497 aa11.89□□□□□ -0.51
CCDC38-204ENST00000546816 SPSB2Q99619 263 aa11.89□□□□□ -0.51
CCDC38-204ENST00000546816 ZNF697Q5TEC3 545 aa11.88□□□□□ -0.51
CCDC38-204ENST00000546816 RDH13Q8NBN7 331 aa11.88□□□□□ -0.51
CCDC38-204ENST00000546816 DDX11L8A8MPP1 907 aa11.87□□□□□ -0.51
CCDC38-204ENST00000546816 GDF9O60383 454 aa11.87□□□□□ -0.51
CCDC38-204ENST00000546816 THAP11Q96EK4 314 aa11.87□□□□□ -0.51
CCDC38-204ENST00000546816 KDM2AQ9Y2K7 1162 aa11.87□□□□□ -0.51
CCDC38-204ENST00000546816 FUT2Q10981 343 aa11.86□□□□□ -0.51
CCDC38-204ENST00000546816 GCGRP47871 477 aa11.85□□□□□ -0.51
CCDC38-204ENST00000546816 HAP1P54257 671 aaPredicted RBP11.85□□□□□ -0.51
CCDC38-204ENST00000546816 GPIHBP1Q8IV16 184 aa11.85□□□□□ -0.51
CCDC38-204ENST00000546816 DGAT1O75907 488 aa11.84□□□□□ -0.51
CCDC38-204ENST00000546816 ATP6V1AP38606 617 aa11.84□□□□□ -0.51
CCDC38-204ENST00000546816 ZNF787Q6DD87 383 aa11.83□□□□□ -0.52
CCDC38-204ENST00000546816 SULF1Q8IWU6 871 aa11.83□□□□□ -0.52
CCDC38-204ENST00000546816 MYT1Q01538 1121 aa11.82□□□□□ -0.52
CCDC38-204ENST00000546816 PKDCCQ504Y2 493 aa11.82□□□□□ -0.52
CCDC38-204ENST00000546816 SLC27A5Q9Y2P5 690 aa11.82□□□□□ -0.52
CCDC38-204ENST00000546816 FAM160A2Q8N612 972 aaPredicted RBP11.81□□□□□ -0.52
CCDC38-204ENST00000546816 SALL2Q9Y467 1007 aaPredicted RBP11.8□□□□□ -0.52
CCDC38-204ENST00000546816 TNFRSF10AO00220 468 aa11.79□□□□□ -0.52
CCDC38-204ENST00000546816 FMNL1O95466 1100 aaPredicted RBP11.78□□□□□ -0.52
CCDC38-204ENST00000546816 PKD2L1Q9P0L9 805 aa11.78□□□□□ -0.52
CCDC38-204ENST00000546816 RPIAP49247 311 aa11.77□□□□□ -0.53
CCDC38-204ENST00000546816 BRICD5Q6PL45 260 aa11.77□□□□□ -0.53
CCDC38-204ENST00000546816 FCF1Q9Y324 198 aaKnown RBP11.76□□□□□ -0.53
CCDC38-204ENST00000546816 FAM187AA6NFU0 413 aa11.75□□□□□ -0.53
CCDC38-204ENST00000546816 LMOD2Q6P5Q4 547 aa11.75□□□□□ -0.53
CCDC38-204ENST00000546816 MAP2K5Q13163 448 aa11.74□□□□□ -0.53
CCDC38-204ENST00000546816 PRDM9Q9NQV7 894 aa11.74□□□□□ -0.53
CCDC38-204ENST00000546816 CD46P15529 392 aa11.72□□□□□ -0.53
CCDC38-204ENST00000546816 MSS51Q4VC12 460 aa11.72□□□□□ -0.53
CCDC38-204ENST00000546816 RNF19BQ6ZMZ0 732 aa11.72□□□□□ -0.53
CCDC38-204ENST00000546816 FOXC1Q12948 553 aa11.71□□□□□ -0.53
CCDC38-204ENST00000546816 ZNF775Q96BV0 537 aaPredicted RBP11.71□□□□□ -0.53
CCDC38-204ENST00000546816 IRF6O14896 467 aa11.7□□□□□ -0.54
CCDC38-204ENST00000546816 GRIPAP1Q4V328 841 aa11.7□□□□□ -0.54
CCDC38-204ENST00000546816 POTECB2RU33 542 aa11.69□□□□□ -0.54
CCDC38-204ENST00000546816 CD2BP2O95400 341 aaKnown RBP11.69□□□□□ -0.54
CCDC38-204ENST00000546816 AAASQ9NRG9 546 aa11.68□□□□□ -0.54
CCDC38-204ENST00000546816 TOR4AQ9NXH8 423 aa11.68□□□□□ -0.54
CCDC38-204ENST00000546816 VSIG10Q8N0Z9 540 aa11.67□□□□□ -0.54
CCDC38-204ENST00000546816 MINK1Q8N4C8 1332 aaPredicted RBP11.66□□□□□ -0.54
CCDC38-204ENST00000546816 ST8SIA5O15466 376 aa11.66□□□□□ -0.54
CCDC38-204ENST00000546816 Q3C1V9 767 aa11.66□□□□□ -0.54
CCDC38-204ENST00000546816 KDM4AO75164 1064 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms