RNA–Protein interactions for RNA: ENST00000545848.5

LDHC-209, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-209ENST00000545848 UPF1Q92900 1129 aaKnown RBP eCLIP10.5□□□□□ -0.73
LDHC-209ENST00000545848 PSDA5PKW4 1024 aaPredicted RBP10.49□□□□□ -0.73
LDHC-209ENST00000545848 DDX27Q96GQ7 796 aaKnown RBP10.49□□□□□ -0.73
LDHC-209ENST00000545848 PBX2P40425 430 aa10.48□□□□□ -0.73
LDHC-209ENST00000545848 CADPS2Q86UW7 1296 aa10.48□□□□□ -0.73
LDHC-209ENST00000545848 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.48□□□□□ -0.73
LDHC-209ENST00000545848 HECW1Q76N89 1606 aa10.47□□□□□ -0.73
LDHC-209ENST00000545848 POTEEQ6S8J3 1075 aa10.47□□□□□ -0.73
LDHC-209ENST00000545848 ANKRD13DQ6ZTN6 518 aa10.47□□□□□ -0.73
LDHC-209ENST00000545848 LSM11P83369 360 aaKnown RBP eCLIP10.46□□□□□ -0.73
LDHC-209ENST00000545848 MFSD10Q14728 455 aa10.46□□□□□ -0.73
LDHC-209ENST00000545848 AXIN2Q9Y2T1 843 aa10.46□□□□□ -0.73
LDHC-209ENST00000545848 RICTORQ6R327 1708 aa10.45□□□□□ -0.74
LDHC-209ENST00000545848 CDC42BPBQ9Y5S2 1711 aa10.44□□□□□ -0.74
LDHC-209ENST00000545848 CDC42BPAQ5VT25 1732 aa10.43□□□□□ -0.74
LDHC-209ENST00000545848 MYO5CQ9NQX4 1742 aa10.42□□□□□ -0.74
LDHC-209ENST00000545848 UBTFP17480 764 aaKnown RBP10.42□□□□□ -0.74
LDHC-209ENST00000545848 PPP4R3BQ5MIZ7 849 aa10.42□□□□□ -0.74
LDHC-209ENST00000545848 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.42□□□□□ -0.74
LDHC-209ENST00000545848 MYT1LQ9UL68 1186 aa10.42□□□□□ -0.74
LDHC-209ENST00000545848 ARHGAP33O14559 1287 aa10.41□□□□□ -0.74
LDHC-209ENST00000545848 PTGER2P43116 358 aa10.41□□□□□ -0.74
LDHC-209ENST00000545848 SPRYD3Q8NCJ5 442 aa10.41□□□□□ -0.74
LDHC-209ENST00000545848 RNF166Q96A37 237 aaPredicted RBP10.41□□□□□ -0.74
LDHC-209ENST00000545848 KCNH8Q96L42 1107 aa10.41□□□□□ -0.74
LDHC-209ENST00000545848 CD109Q6YHK3 1445 aa10.4□□□□□ -0.75
LDHC-209ENST00000545848 LOC105371045A0A1W2PR82 267 aa10.39□□□□□ -0.75
LDHC-209ENST00000545848 CLIP1P30622 1438 aa10.39□□□□□ -0.75
LDHC-209ENST00000545848 CEP162Q5TB80 1403 aa10.38□□□□□ -0.75
LDHC-209ENST00000545848 PREX2Q70Z35 1606 aa10.37□□□□□ -0.75
LDHC-209ENST00000545848 EVI5O60447 810 aa10.37□□□□□ -0.75
LDHC-209ENST00000545848 ZNF454Q8N9F8 522 aa10.37□□□□□ -0.75
LDHC-209ENST00000545848 EMILIN3Q9NT22 766 aa10.37□□□□□ -0.75
LDHC-209ENST00000545848 CASKIN1Q8WXD9 1431 aa10.36□□□□□ -0.75
LDHC-209ENST00000545848 PSEN2P49810 448 aa10.36□□□□□ -0.75
LDHC-209ENST00000545848 MAP3K9P80192 1104 aa10.36□□□□□ -0.75
LDHC-209ENST00000545848 TEX14Q8IWB6 1497 aa10.36□□□□□ -0.75
LDHC-209ENST00000545848 FMN1Q68DA7 1419 aa10.35□□□□□ -0.75
LDHC-209ENST00000545848 ARAP3Q8WWN8 1544 aa10.35□□□□□ -0.75
LDHC-209ENST00000545848 FYCO1Q9BQS8 1478 aa10.35□□□□□ -0.75
LDHC-209ENST00000545848 ITSN2Q9NZM3 1697 aa10.34□□□□□ -0.75
LDHC-209ENST00000545848 DMRTA1Q5VZB9 504 aa10.34□□□□□ -0.75
LDHC-209ENST00000545848 ADGRD1Q6QNK2 874 aa10.34□□□□□ -0.75
LDHC-209ENST00000545848 ANO8Q9HCE9 1232 aaPredicted RBP10.34□□□□□ -0.75
LDHC-209ENST00000545848 PAXIP1Q6ZW49 1069 aaPredicted RBP10.33□□□□□ -0.76
LDHC-209ENST00000545848 CFAP44Q96MT7 982 aa10.33□□□□□ -0.76
LDHC-209ENST00000545848 KCNK17Q96T54 332 aa10.33□□□□□ -0.76
LDHC-209ENST00000545848 ADGRL1O94910 1474 aa10.33□□□□□ -0.76
LDHC-209ENST00000545848 SAMD9LQ8IVG5 1584 aa10.33□□□□□ -0.76
LDHC-209ENST00000545848 ARHGEF40Q8TER5 1519 aa10.33□□□□□ -0.76
LDHC-209ENST00000545848 ARHGEF12Q9NZN5 1544 aa10.33□□□□□ -0.76
LDHC-209ENST00000545848 FOSBP53539 338 aa10.32□□□□□ -0.76
LDHC-209ENST00000545848 TROQ12816 1431 aaPredicted RBP10.32□□□□□ -0.76
LDHC-209ENST00000545848 TIAM1Q13009 1591 aa10.31□□□□□ -0.76
LDHC-209ENST00000545848 CAMK2BQ13554 666 aa10.31□□□□□ -0.76
LDHC-209ENST00000545848 CFAP74Q9C0B2 1584 aa10.31□□□□□ -0.76
LDHC-209ENST00000545848 FANCAO15360 1455 aa10.3□□□□□ -0.76
LDHC-209ENST00000545848 ABCA6Q8N139 1617 aa10.3□□□□□ -0.76
LDHC-209ENST00000545848 ABCC1P33527 1531 aa10.3□□□□□ -0.76
LDHC-209ENST00000545848 ZMYM4Q5VZL5 1548 aa10.3□□□□□ -0.76
LDHC-209ENST00000545848 TK2O00142 265 aa10.3□□□□□ -0.76
LDHC-209ENST00000545848 BCL2L12Q9HB09 334 aa10.3□□□□□ -0.76
LDHC-209ENST00000545848 ADAMTSL3P82987 1691 aa10.3□□□□□ -0.76
LDHC-209ENST00000545848 YEATS2Q9ULM3 1422 aa10.3□□□□□ -0.76
LDHC-209ENST00000545848 NEO1Q92859 1461 aa10.3□□□□□ -0.76
LDHC-209ENST00000545848 RAPGEF3O95398 923 aa10.29□□□□□ -0.76
LDHC-209ENST00000545848 BCORL1Q5H9F3 1711 aa10.29□□□□□ -0.76
LDHC-209ENST00000545848 MADDQ8WXG6 1647 aa10.28□□□□□ -0.76
LDHC-209ENST00000545848 CCDC18Q5T9S5 1454 aa10.28□□□□□ -0.76
LDHC-209ENST00000545848 KDM5CP41229 1560 aa10.27□□□□□ -0.76
LDHC-209ENST00000545848 KIDINS220Q9ULH0 1771 aa10.27□□□□□ -0.77
LDHC-209ENST00000545848 AKNAQ7Z591 1439 aa10.27□□□□□ -0.77
LDHC-209ENST00000545848 ZDHHC16Q969W1 377 aa10.27□□□□□ -0.77
LDHC-209ENST00000545848 ATP1B4Q9UN42 357 aaPredicted RBP10.27□□□□□ -0.77
LDHC-209ENST00000545848 DIP2CQ9Y2E4 1556 aa10.26□□□□□ -0.77
LDHC-209ENST00000545848 PLCH2O75038 1416 aa10.26□□□□□ -0.77
LDHC-209ENST00000545848 DPYSL4O14531 572 aa10.26□□□□□ -0.77
LDHC-209ENST00000545848 HRO43593 1189 aa10.26□□□□□ -0.77
LDHC-209ENST00000545848 PTPREP23469 700 aa10.26□□□□□ -0.77
LDHC-209ENST00000545848 ARHGAP5Q13017 1502 aa10.26□□□□□ -0.77
LDHC-209ENST00000545848 POGZQ7Z3K3 1410 aa10.25□□□□□ -0.77
LDHC-209ENST00000545848 RIMS1Q86UR5 1692 aaKnown RBP10.25□□□□□ -0.77
LDHC-209ENST00000545848 SYCP2Q9BX26 1530 aa10.25□□□□□ -0.77
LDHC-209ENST00000545848 ADAM33Q9BZ11 813 aa10.25□□□□□ -0.77
LDHC-209ENST00000545848 EHBP1L1Q8N3D4 1523 aa10.24□□□□□ -0.77
LDHC-209ENST00000545848 PCDHGA10Q9Y5H3 936 aa10.24□□□□□ -0.77
LDHC-209ENST00000545848 TRAPPC8Q9Y2L5 1435 aa10.24□□□□□ -0.77
LDHC-209ENST00000545848 ZFYVE16Q7Z3T8 1539 aa10.23□□□□□ -0.77
LDHC-209ENST00000545848 GPATCH8Q9UKJ3 1502 aaKnown RBP10.23□□□□□ -0.77
LDHC-209ENST00000545848 HECW2Q9P2P5 1572 aa10.23□□□□□ -0.77
LDHC-209ENST00000545848 VPS9D1Q9Y2B5 631 aa10.23□□□□□ -0.77
LDHC-209ENST00000545848 SUPT6HQ7KZ85 1726 aaKnown RBP10.23□□□□□ -0.77
LDHC-209ENST00000545848 DENND4BO75064 1496 aaPredicted RBP10.23□□□□□ -0.77
LDHC-209ENST00000545848 INO80Q9ULG1 1556 aaPredicted RBP10.22□□□□□ -0.77
LDHC-209ENST00000545848 ADGBQ8N7X0 1667 aa10.22□□□□□ -0.77
LDHC-209ENST00000545848 FER1L4A9Z1Z3 1794 aa10.22□□□□□ -0.77
LDHC-209ENST00000545848 PLEKHD1A6NEE1 506 aa10.22□□□□□ -0.77
LDHC-209ENST00000545848 VPS8Q8N3P4 1428 aa10.22□□□□□ -0.77
LDHC-209ENST00000545848 SCAPERQ9BY12 1400 aa10.21□□□□□ -0.78
LDHC-209ENST00000545848 PHF14O94880 888 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms