RNA–Protein interactions for RNA: ENST00000545718.2

SCAP-215, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 2,950 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-215ENST00000545718 EIF3AQ14152 1382 aaKnown RBP20.66■□□□□ 0.9
SCAP-215ENST00000545718 SPHKAPQ2M3C7 1700 aa20.65■□□□□ 0.9
SCAP-215ENST00000545718 RNF17Q9BXT8 1623 aaKnown RBP20.64■□□□□ 0.9
SCAP-215ENST00000545718 STAC3Q96MF2 364 aa20.64■□□□□ 0.89
SCAP-215ENST00000545718 NPM2Q86SE8 214 aaKnown RBP20.63■□□□□ 0.89
SCAP-215ENST00000545718 ARAP3Q8WWN8 1544 aa20.62■□□□□ 0.89
SCAP-215ENST00000545718 ANP32AP39687 249 aaKnown RBP20.62■□□□□ 0.89
SCAP-215ENST00000545718 BLMP54132 1417 aaPredicted RBP20.62■□□□□ 0.89
SCAP-215ENST00000545718 CRBNQ96SW2 442 aa20.62■□□□□ 0.89
SCAP-215ENST00000545718 TRAK1Q9UPV9 953 aa20.62■□□□□ 0.89
SCAP-215ENST00000545718 NUTM2DQ5VT03 806 aaPredicted RBP20.61■□□□□ 0.89
SCAP-215ENST00000545718 TET3O43151 1660 aa20.6■□□□□ 0.89
SCAP-215ENST00000545718 TNNT2P45379 298 aaPredicted RBP20.6■□□□□ 0.89
SCAP-215ENST00000545718 CEP152O94986 1710 aa20.6■□□□□ 0.89
SCAP-215ENST00000545718 SKAP1Q86WV1 359 aa20.58■□□□□ 0.89
SCAP-215ENST00000545718 INO80Q9ULG1 1556 aaPredicted RBP20.58■□□□□ 0.89
SCAP-215ENST00000545718 IQGAP1P46940 1657 aa20.58■□□□□ 0.89
SCAP-215ENST00000545718 C20orf194Q5TEA3 1177 aa20.58■□□□□ 0.89
SCAP-215ENST00000545718 CFAP65Q6ZU64 1925 aaKnown RBP20.58■□□□□ 0.89
SCAP-215ENST00000545718 ABCA9Q8IUA7 1624 aa20.58■□□□□ 0.88
SCAP-215ENST00000545718 PLEKHH1Q9ULM0 1364 aa20.58■□□□□ 0.88
SCAP-215ENST00000545718 TMEM132EQ6IEE7 984 aa20.58■□□□□ 0.88
SCAP-215ENST00000545718 NOP58Q9Y2X3 529 aaKnown RBP20.58■□□□□ 0.88
SCAP-215ENST00000545718 PAK3O75914 559 aaPredicted RBP20.56■□□□□ 0.88
SCAP-215ENST00000545718 DEPDC5O75140 1603 aa20.56■□□□□ 0.88
SCAP-215ENST00000545718 GOLGA2Q08379 1002 aa20.56■□□□□ 0.88
SCAP-215ENST00000545718 CYB5RLQ6IPT4 315 aa20.56■□□□□ 0.88
SCAP-215ENST00000545718 ASXL1Q8IXJ9 1541 aa20.56■□□□□ 0.88
SCAP-215ENST00000545718 APAF1O14727 1248 aa20.55■□□□□ 0.88
SCAP-215ENST00000545718 NOS1P29475 1434 aa20.54■□□□□ 0.88
SCAP-215ENST00000545718 NBR1Q14596 966 aa20.54■□□□□ 0.88
SCAP-215ENST00000545718 CARD14Q9BXL6 1004 aa20.54■□□□□ 0.88
SCAP-215ENST00000545718 RAPGEF3O95398 923 aa20.53■□□□□ 0.88
SCAP-215ENST00000545718 ZMYM4Q5VZL5 1548 aa20.52■□□□□ 0.88
SCAP-215ENST00000545718 CD109Q6YHK3 1445 aa20.52■□□□□ 0.88
SCAP-215ENST00000545718 CENPJQ9HC77 1338 aaPredicted RBP20.52■□□□□ 0.88
SCAP-215ENST00000545718 DUSP27Q5VZP5 1158 aa20.52■□□□□ 0.88
SCAP-215ENST00000545718 SYNMO15061 1565 aa20.51■□□□□ 0.87
SCAP-215ENST00000545718 ZNF518AQ6AHZ1 1483 aa20.51■□□□□ 0.87
SCAP-215ENST00000545718 VWDEQ8N2E2 1590 aa20.5■□□□□ 0.87
SCAP-215ENST00000545718 TCERG1O14776 1098 aaKnown RBP20.5■□□□□ 0.87
SCAP-215ENST00000545718 SLC12A5Q9H2X9 1139 aa20.5■□□□□ 0.87
SCAP-215ENST00000545718 MROH1Q8NDA8 1641 aa20.5■□□□□ 0.87
SCAP-215ENST00000545718 SAFB2Q14151 953 aaKnown RBP eCLIP20.49■□□□□ 0.87
SCAP-215ENST00000545718 NEUROD2Q15784 382 aa20.49■□□□□ 0.87
SCAP-215ENST00000545718 ERVK-7P63135 1459 aa20.49■□□□□ 0.87
SCAP-215ENST00000545718 ZBTB47Q9UFB7 747 aaPredicted RBP20.49■□□□□ 0.87
SCAP-215ENST00000545718 INSRP06213 1382 aa20.49■□□□□ 0.87
SCAP-215ENST00000545718 SLC24A1O60721 1099 aa20.49■□□□□ 0.87
SCAP-215ENST00000545718 IPO9Q96P70 1041 aaKnown RBP20.49■□□□□ 0.87
SCAP-215ENST00000545718 PDE4AP27815 886 aa20.48■□□□□ 0.87
SCAP-215ENST00000545718 EFCAB6Q5THR3 1501 aa20.48■□□□□ 0.87
SCAP-215ENST00000545718 ABCA6Q8N139 1617 aa20.48■□□□□ 0.87
SCAP-215ENST00000545718 MAP3K4Q9Y6R4 1608 aa20.48■□□□□ 0.87
SCAP-215ENST00000545718 KIDINS220Q9ULH0 1771 aa20.47■□□□□ 0.87
SCAP-215ENST00000545718 MORC1Q86VD1 984 aa20.47■□□□□ 0.87
SCAP-215ENST00000545718 KIF1BO60333 1816 aa20.46■□□□□ 0.87
SCAP-215ENST00000545718 SPINK5Q9NQ38 1064 aaPredicted RBP20.46■□□□□ 0.87
SCAP-215ENST00000545718 KDM5AP29375 1690 aaKnown RBP20.46■□□□□ 0.87
SCAP-215ENST00000545718 PIK3C2GO75747 1445 aa20.46■□□□□ 0.87
SCAP-215ENST00000545718 PPRC1Q5VV67 1664 aaKnown RBP20.46■□□□□ 0.87
SCAP-215ENST00000545718 NPATQ14207 1427 aa20.45■□□□□ 0.86
SCAP-215ENST00000545718 MYOM2P54296 1465 aa20.45■□□□□ 0.86
SCAP-215ENST00000545718 SLFN5Q08AF3 891 aa20.44■□□□□ 0.86
SCAP-215ENST00000545718 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.44■□□□□ 0.86
SCAP-215ENST00000545718 MYOM1P52179 1685 aa20.43■□□□□ 0.86
SCAP-215ENST00000545718 RRP7AQ9Y3A4 280 aaKnown RBP20.43■□□□□ 0.86
SCAP-215ENST00000545718 ZNF521Q96K83 1311 aa20.42■□□□□ 0.86
SCAP-215ENST00000545718 MROH2AA6NES4 1674 aa20.42■□□□□ 0.86
SCAP-215ENST00000545718 NPC1L1Q9UHC9 1359 aa20.42■□□□□ 0.86
SCAP-215ENST00000545718 STK26Q9P289 416 aa20.42■□□□□ 0.86
SCAP-215ENST00000545718 C14orf93Q9H972 538 aaKnown RBP20.41■□□□□ 0.86
SCAP-215ENST00000545718 DMRT2Q9Y5R5 561 aa20.41■□□□□ 0.86
SCAP-215ENST00000545718 NSD3Q9BZ95 1437 aa20.41■□□□□ 0.86
SCAP-215ENST00000545718 BCAR3O75815 825 aa20.41■□□□□ 0.86
SCAP-215ENST00000545718 POGZQ7Z3K3 1410 aa20.41■□□□□ 0.86
SCAP-215ENST00000545718 BACH2Q9BYV9 841 aa20.39■□□□□ 0.85
SCAP-215ENST00000545718 KIAA1210Q9ULL0 1709 aa20.38■□□□□ 0.85
SCAP-215ENST00000545718 CANXP27824 592 aaKnown RBP20.38■□□□□ 0.85
SCAP-215ENST00000545718 CABP2Q9NPB3 220 aa20.36■□□□□ 0.85
SCAP-215ENST00000545718 E9PSI1 815 aa20.36■□□□□ 0.85
SCAP-215ENST00000545718 MS4A1P11836 297 aa20.36■□□□□ 0.85
SCAP-215ENST00000545718 RGS3P49796 1198 aa20.35■□□□□ 0.85
SCAP-215ENST00000545718 MTHFSP49914 203 aa20.34■□□□□ 0.85
SCAP-215ENST00000545718 ADGRB3O60242 1522 aa20.34■□□□□ 0.85
SCAP-215ENST00000545718 VGFO15240 615 aaPredicted RBP20.34■□□□□ 0.85
SCAP-215ENST00000545718 FRAT1Q92837 279 aaPredicted RBP20.33■□□□□ 0.85
SCAP-215ENST00000545718 IDI1Q13907 227 aa20.33■□□□□ 0.84
SCAP-215ENST00000545718 LMTK2Q8IWU2 1503 aa20.32■□□□□ 0.84
SCAP-215ENST00000545718 MLH3Q9UHC1 1453 aa20.32■□□□□ 0.84
SCAP-215ENST00000545718 FRMPD1Q5SYB0 1578 aa20.32■□□□□ 0.84
SCAP-215ENST00000545718 CENPQQ7L2Z9 268 aaPredicted RBP20.32■□□□□ 0.84
SCAP-215ENST00000545718 WWC1Q8IX03 1113 aa20.32■□□□□ 0.84
SCAP-215ENST00000545718 SBNO2Q9Y2G9 1366 aa20.32■□□□□ 0.84
SCAP-215ENST00000545718 SRPK2P78362 688 aaKnown RBP20.31■□□□□ 0.84
SCAP-215ENST00000545718 NRXN1Q9ULB1 1477 aa20.31■□□□□ 0.84
SCAP-215ENST00000545718 CGNL1Q0VF96 1302 aa20.31■□□□□ 0.84
SCAP-215ENST00000545718 NEURL4Q96JN8 1562 aa20.31■□□□□ 0.84
SCAP-215ENST00000545718 NKTRP30414 1462 aaKnown RBP20.31■□□□□ 0.84
SCAP-215ENST00000545718 EVC2Q86UK5 1308 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms