RNA–Protein interactions for RNA: ENST00000544810.5

CNGA1-209, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CNGA1, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-209ENST00000544810 NLRP1Q9C000 1473 aa6.79□□□□□ -1.32
CNGA1-209ENST00000544810 FBXO31Q5XUX0 539 aaPredicted RBP6.79□□□□□ -1.32
CNGA1-209ENST00000544810 FAM135AQ9P2D6 1515 aa6.79□□□□□ -1.32
CNGA1-209ENST00000544810 ANP32EQ9BTT0 268 aa6.79□□□□□ -1.32
CNGA1-209ENST00000544810 RBM42Q9BTD8 480 aaKnown RBP6.78□□□□□ -1.32
CNGA1-209ENST00000544810 STAG3Q9UJ98 1225 aa6.78□□□□□ -1.32
CNGA1-209ENST00000544810 UGGT1Q9NYU2 1555 aa6.78□□□□□ -1.32
CNGA1-209ENST00000544810 MIA2Q96PC5 1412 aa6.77□□□□□ -1.33
CNGA1-209ENST00000544810 GTPBP6O43824 516 aaPredicted RBP6.77□□□□□ -1.33
CNGA1-209ENST00000544810 KIAA1107Q9UPP5 1409 aa6.77□□□□□ -1.33
CNGA1-209ENST00000544810 HNRNPMP52272 730 aaKnown RBP eCLIP6.77□□□□□ -1.33
CNGA1-209ENST00000544810 KDM5DQ9BY66 1539 aa6.76□□□□□ -1.33
CNGA1-209ENST00000544810 ZNF777Q9ULD5 760 aaPredicted RBP6.76□□□□□ -1.33
CNGA1-209ENST00000544810 CDC42BPAQ5VT25 1732 aa6.76□□□□□ -1.33
CNGA1-209ENST00000544810 TRIM52Q96A61 297 aa6.76□□□□□ -1.33
CNGA1-209ENST00000544810 ZC3H13Q5T200 1668 aaKnown RBP6.76□□□□□ -1.33
CNGA1-209ENST00000544810 PLEKHH2Q8IVE3 1493 aa6.75□□□□□ -1.33
CNGA1-209ENST00000544810 EEA1Q15075 1411 aa6.75□□□□□ -1.33
CNGA1-209ENST00000544810 JCADQ9P266 1359 aa6.75□□□□□ -1.33
CNGA1-209ENST00000544810 ARHGAP35Q9NRY4 1499 aa6.75□□□□□ -1.33
CNGA1-209ENST00000544810 ADGBQ8N7X0 1667 aa6.75□□□□□ -1.33
CNGA1-209ENST00000544810 GPATCH8Q9UKJ3 1502 aaKnown RBP6.74□□□□□ -1.33
CNGA1-209ENST00000544810 LRRIQ1Q96JM4 1722 aa6.74□□□□□ -1.33
CNGA1-209ENST00000544810 ERICH6Q7L0X2 663 aa6.74□□□□□ -1.33
CNGA1-209ENST00000544810 LRRC9Q6ZRR7 1453 aa6.74□□□□□ -1.33
CNGA1-209ENST00000544810 ROBO1Q9Y6N7 1651 aa6.74□□□□□ -1.33
CNGA1-209ENST00000544810 CDK12Q9NYV4 1490 aaPredicted RBP6.74□□□□□ -1.33
CNGA1-209ENST00000544810 ZNF772Q68DY9 489 aaPredicted RBP6.74□□□□□ -1.33
CNGA1-209ENST00000544810 XIRP1Q702N8 1843 aaKnown RBP6.74□□□□□ -1.33
CNGA1-209ENST00000544810 LRP6O75581 1613 aa6.74□□□□□ -1.33
CNGA1-209ENST00000544810 CCDC18Q5T9S5 1454 aa6.73□□□□□ -1.33
CNGA1-209ENST00000544810 SCAF11Q99590 1463 aaKnown RBP6.73□□□□□ -1.33
CNGA1-209ENST00000544810 DHX29Q7Z478 1369 aaKnown RBP6.73□□□□□ -1.33
CNGA1-209ENST00000544810 STK25O00506 426 aa6.73□□□□□ -1.33
CNGA1-209ENST00000544810 TMEM94Q12767 1356 aa6.72□□□□□ -1.33
CNGA1-209ENST00000544810 MAP3K1Q13233 1512 aa6.72□□□□□ -1.33
CNGA1-209ENST00000544810 RTEL1-TNFRSF6BF6WH68 1400 aa6.71□□□□□ -1.33
CNGA1-209ENST00000544810 KIF3BO15066 747 aa6.71□□□□□ -1.33
CNGA1-209ENST00000544810 WASHC2CQ9Y4E1 1318 aa6.71□□□□□ -1.33
CNGA1-209ENST00000544810 ARHGAP23Q9P227 1491 aa6.71□□□□□ -1.34
CNGA1-209ENST00000544810 RXRBP28702 533 aa6.71□□□□□ -1.34
CNGA1-209ENST00000544810 SPATA31A6Q5VVP1 1343 aa6.71□□□□□ -1.34
CNGA1-209ENST00000544810 ZBTB12Q9Y330 459 aaPredicted RBP6.7□□□□□ -1.34
CNGA1-209ENST00000544810 CASKIN1Q8WXD9 1431 aa6.7□□□□□ -1.34
CNGA1-209ENST00000544810 NCOA2Q15596 1464 aa6.7□□□□□ -1.34
CNGA1-209ENST00000544810 MEX3CQ5U5Q3 659 aaKnown RBP6.7□□□□□ -1.34
CNGA1-209ENST00000544810 CFDP1Q9UEE9 299 aaPredicted RBP6.7□□□□□ -1.34
CNGA1-209ENST00000544810 COL16A1Q07092 1604 aaPredicted RBP6.7□□□□□ -1.34
CNGA1-209ENST00000544810 PHLPP1O60346 1717 aa6.7□□□□□ -1.34
CNGA1-209ENST00000544810 FGD6Q6ZV73 1430 aa6.7□□□□□ -1.34
CNGA1-209ENST00000544810 ERVK-7P63135 1459 aa6.7□□□□□ -1.34
CNGA1-209ENST00000544810 SLIT1O75093 1534 aa6.7□□□□□ -1.34
CNGA1-209ENST00000544810 LTKP29376 864 aa6.7□□□□□ -1.34
CNGA1-209ENST00000544810 MBD5Q9P267 1494 aa6.69□□□□□ -1.34
CNGA1-209ENST00000544810 BRPF1P55201 1214 aaPredicted RBP6.69□□□□□ -1.34
CNGA1-209ENST00000544810 SSUH2Q9Y2M2 353 aa6.69□□□□□ -1.34
CNGA1-209ENST00000544810 RGS12O14924 1447 aa6.69□□□□□ -1.34
CNGA1-209ENST00000544810 ZNF316A6NFI3 1004 aaPredicted RBP6.68□□□□□ -1.34
CNGA1-209ENST00000544810 PLEKHG5O94827 1062 aa6.68□□□□□ -1.34
CNGA1-209ENST00000544810 LMOD2Q6P5Q4 547 aa6.68□□□□□ -1.34
CNGA1-209ENST00000544810 TXNDC2Q86VQ3 553 aa6.68□□□□□ -1.34
CNGA1-209ENST00000544810 SETBP1Q9Y6X0 1596 aa6.68□□□□□ -1.34
CNGA1-209ENST00000544810 UBR1Q8IWV7 1749 aa6.68□□□□□ -1.34
CNGA1-209ENST00000544810 TIAM1Q13009 1591 aa6.68□□□□□ -1.34
CNGA1-209ENST00000544810 PRDM15P57071 1507 aaPredicted RBP6.68□□□□□ -1.34
CNGA1-209ENST00000544810 CCNB3Q8WWL7 1395 aa6.68□□□□□ -1.34
CNGA1-209ENST00000544810 KCNA6P17658 529 aa6.68□□□□□ -1.34
CNGA1-209ENST00000544810 ABCC3O15438 1527 aa6.67□□□□□ -1.34
CNGA1-209ENST00000544810 RIOK3O14730 519 aaKnown RBP6.67□□□□□ -1.34
CNGA1-209ENST00000544810 PROSER2Q86WR7 435 aaPredicted RBP6.67□□□□□ -1.34
CNGA1-209ENST00000544810 CCER1Q8TC90 406 aaPredicted RBP6.67□□□□□ -1.34
CNGA1-209ENST00000544810 SLAIN2Q9P270 581 aa6.67□□□□□ -1.34
CNGA1-209ENST00000544810 ZRANB1Q9UGI0 708 aa6.67□□□□□ -1.34
CNGA1-209ENST00000544810 NKTRP30414 1462 aaKnown RBP6.67□□□□□ -1.34
CNGA1-209ENST00000544810 MSH6P52701 1360 aa6.67□□□□□ -1.34
CNGA1-209ENST00000544810 ZNF644Q9H582 1327 aaPredicted RBP6.67□□□□□ -1.34
CNGA1-209ENST00000544810 RBM33Q96EV2 1170 aaKnown RBP6.67□□□□□ -1.34
CNGA1-209ENST00000544810 PODXL2Q9NZ53 605 aa6.66□□□□□ -1.34
CNGA1-209ENST00000544810 NWD1Q149M9 1564 aa6.66□□□□□ -1.34
CNGA1-209ENST00000544810 KCNV2Q8TDN2 545 aa6.66□□□□□ -1.34
CNGA1-209ENST00000544810 ZBTB47Q9UFB7 747 aaPredicted RBP6.66□□□□□ -1.34
CNGA1-209ENST00000544810 EID1Q9Y6B2 187 aa6.66□□□□□ -1.34
CNGA1-209ENST00000544810 UBTFP17480 764 aaKnown RBP6.65□□□□□ -1.34
CNGA1-209ENST00000544810 FYCO1Q9BQS8 1478 aa6.65□□□□□ -1.34
CNGA1-209ENST00000544810 SHPRHQ149N8 1683 aa6.65□□□□□ -1.34
CNGA1-209ENST00000544810 AFF2P51816 1311 aa6.65□□□□□ -1.34
CNGA1-209ENST00000544810 CAMSAP2Q08AD1 1489 aa6.65□□□□□ -1.35
CNGA1-209ENST00000544810 AHDC1Q5TGY3 1603 aaPredicted RBP6.65□□□□□ -1.35
CNGA1-209ENST00000544810 TMEM2Q9UHN6 1383 aa6.65□□□□□ -1.35
CNGA1-209ENST00000544810 SPDYE2BA6NHP3 402 aa6.64□□□□□ -1.35
CNGA1-209ENST00000544810 SPDYE6P0CI01 402 aa6.64□□□□□ -1.35
CNGA1-209ENST00000544810 SPDYE2Q495Y8 402 aa6.64□□□□□ -1.35
CNGA1-209ENST00000544810 DCAF8Q5TAQ9 597 aa6.64□□□□□ -1.35
CNGA1-209ENST00000544810 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.64□□□□□ -1.35
CNGA1-209ENST00000544810 STK24Q9Y6E0 443 aa6.64□□□□□ -1.35
CNGA1-209ENST00000544810 ATAD2Q6PL18 1390 aa6.64□□□□□ -1.35
CNGA1-209ENST00000544810 CCDC141Q6ZP82 1450 aa6.64□□□□□ -1.35
CNGA1-209ENST00000544810 NUTM2BA6NNL0 878 aaPredicted RBP6.64□□□□□ -1.35
CNGA1-209ENST00000544810 NUTM2EB1AL46 878 aaPredicted RBP6.64□□□□□ -1.35
CNGA1-209ENST00000544810 NUTM2DQ5VT03 806 aaPredicted RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms