RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 TBC1D12O60347 775 aa10.15□□□□□ -0.78
CPSF7-222ENST00000544585 PTGER2P43116 358 aa10.15□□□□□ -0.78
CPSF7-222ENST00000544585 DDX12PQ92771 950 aa10.15□□□□□ -0.78
CPSF7-222ENST00000544585 PTPRMP28827 1452 aa10.15□□□□□ -0.78
CPSF7-222ENST00000544585 CFAP43Q8NDM7 1665 aa10.15□□□□□ -0.79
CPSF7-222ENST00000544585 GALR2O43603 387 aaPredicted RBP10.14□□□□□ -0.79
CPSF7-222ENST00000544585 IRX5P78411 483 aaPredicted RBP10.13□□□□□ -0.79
CPSF7-222ENST00000544585 ARID3AQ99856 593 aa10.13□□□□□ -0.79
CPSF7-222ENST00000544585 ARID3CA6NKF2 412 aa10.12□□□□□ -0.79
CPSF7-222ENST00000544585 FECHP22830 423 aa10.12□□□□□ -0.79
CPSF7-222ENST00000544585 GOPCQ9HD26 462 aa10.12□□□□□ -0.79
CPSF7-222ENST00000544585 PODXL2Q9NZ53 605 aa10.12□□□□□ -0.79
CPSF7-222ENST00000544585 ABCA8O94911 1581 aa10.11□□□□□ -0.79
CPSF7-222ENST00000544585 CLCN6P51797 869 aa10.11□□□□□ -0.79
CPSF7-222ENST00000544585 IER5LQ5T953 404 aa10.11□□□□□ -0.79
CPSF7-222ENST00000544585 CERKQ8TCT0 537 aa10.11□□□□□ -0.79
CPSF7-222ENST00000544585 OXER1Q8TDS5 423 aa10.11□□□□□ -0.79
CPSF7-222ENST00000544585 ATP10BO94823 1461 aa10.1□□□□□ -0.79
CPSF7-222ENST00000544585 PLEKHD1A6NEE1 506 aa10.1□□□□□ -0.79
CPSF7-222ENST00000544585 ATN1P54259 1190 aaPredicted RBP10.1□□□□□ -0.79
CPSF7-222ENST00000544585 L3MBTL3Q96JM7 780 aaPredicted RBP10.1□□□□□ -0.79
CPSF7-222ENST00000544585 PLCG2P16885 1265 aa10.09□□□□□ -0.79
CPSF7-222ENST00000544585 PTGDRQ13258 359 aa10.09□□□□□ -0.79
CPSF7-222ENST00000544585 PCMTD1Q96MG8 357 aaPredicted RBP10.09□□□□□ -0.79
CPSF7-222ENST00000544585 NEO1Q92859 1461 aa10.09□□□□□ -0.79
CPSF7-222ENST00000544585 GIGYF2Q6Y7W6 1299 aaKnown RBP10.08□□□□□ -0.8
CPSF7-222ENST00000544585 KIF21BO75037 1637 aa10.07□□□□□ -0.8
CPSF7-222ENST00000544585 ADAMTSL3P82987 1691 aa10.07□□□□□ -0.8
CPSF7-222ENST00000544585 APBB1O00213 710 aa10.07□□□□□ -0.8
CPSF7-222ENST00000544585 EVI5O60447 810 aa10.07□□□□□ -0.8
CPSF7-222ENST00000544585 HSPA2P54652 639 aa10.07□□□□□ -0.8
CPSF7-222ENST00000544585 POGZQ7Z3K3 1410 aa10.06□□□□□ -0.8
CPSF7-222ENST00000544585 ATMINO43313 823 aaPredicted RBP10.05□□□□□ -0.8
CPSF7-222ENST00000544585 C1orf115Q9H7X2 142 aa10.05□□□□□ -0.8
CPSF7-222ENST00000544585 PCF11O94913 1555 aaKnown RBP10.05□□□□□ -0.8
CPSF7-222ENST00000544585 PRXQ9BXM0 1461 aa10.04□□□□□ -0.8
CPSF7-222ENST00000544585 MS4A1P11836 297 aa10.03□□□□□ -0.8
CPSF7-222ENST00000544585 PRIM1P49642 420 aaKnown RBP10.03□□□□□ -0.8
CPSF7-222ENST00000544585 ASTLQ6HA08 431 aaPredicted RBP10.03□□□□□ -0.8
CPSF7-222ENST00000544585 DENND4BO75064 1496 aaPredicted RBP10.03□□□□□ -0.8
CPSF7-222ENST00000544585 AKNAQ7Z591 1439 aa10.02□□□□□ -0.81
CPSF7-222ENST00000544585 TMEM92Q6UXU6 159 aa10.02□□□□□ -0.81
CPSF7-222ENST00000544585 ABCA9Q8IUA7 1624 aa10.02□□□□□ -0.81
CPSF7-222ENST00000544585 FHOD3Q2V2M9 1422 aa10.01□□□□□ -0.81
CPSF7-222ENST00000544585 ONECUT3O60422 494 aaPredicted RBP10.01□□□□□ -0.81
CPSF7-222ENST00000544585 CLCN1P35523 988 aa10.01□□□□□ -0.81
CPSF7-222ENST00000544585 MLECQ14165 292 aa10.01□□□□□ -0.81
CPSF7-222ENST00000544585 BCORL1Q5H9F3 1711 aa10.01□□□□□ -0.81
CPSF7-222ENST00000544585 CTTNBP2Q8WZ74 1663 aa10□□□□□ -0.81
CPSF7-222ENST00000544585 A6NJR5 290 aa9.99□□□□□ -0.81
CPSF7-222ENST00000544585 SH3D19Q5HYK7 790 aa9.99□□□□□ -0.81
CPSF7-222ENST00000544585 REPIN1Q9BWE0 567 aaKnown RBP9.99□□□□□ -0.81
CPSF7-222ENST00000544585 SEC24BO95487 1268 aa9.98□□□□□ -0.81
CPSF7-222ENST00000544585 TRIM26Q12899 539 aaPredicted RBP9.98□□□□□ -0.81
CPSF7-222ENST00000544585 PTCD2Q8WV60 388 aaKnown RBP9.98□□□□□ -0.81
CPSF7-222ENST00000544585 GPCPD1Q9NPB8 672 aa9.98□□□□□ -0.81
CPSF7-222ENST00000544585 ATP1B4Q9UN42 357 aaPredicted RBP9.98□□□□□ -0.81
CPSF7-222ENST00000544585 FANCAO15360 1455 aa9.98□□□□□ -0.81
CPSF7-222ENST00000544585 MAGI2Q86UL8 1455 aa9.98□□□□□ -0.81
CPSF7-222ENST00000544585 MADDQ8WXG6 1647 aa9.97□□□□□ -0.81
CPSF7-222ENST00000544585 HAX1O00165 279 aa9.97□□□□□ -0.81
CPSF7-222ENST00000544585 MAP3K7O43318 606 aa9.97□□□□□ -0.81
CPSF7-222ENST00000544585 CLUAP1Q96AJ1 413 aa9.97□□□□□ -0.81
CPSF7-222ENST00000544585 EPAS1Q99814 870 aa9.97□□□□□ -0.81
CPSF7-222ENST00000544585 TRAK2O60296 914 aa9.96□□□□□ -0.82
CPSF7-222ENST00000544585 RANGAP1P46060 587 aaPredicted RBP9.96□□□□□ -0.82
CPSF7-222ENST00000544585 MDM2Q00987 491 aaPredicted RBP9.96□□□□□ -0.82
CPSF7-222ENST00000544585 EN1Q05925 392 aaPredicted RBP9.96□□□□□ -0.82
CPSF7-222ENST00000544585 EFCAB2Q5VUJ9 269 aa9.96□□□□□ -0.82
CPSF7-222ENST00000544585 ANO8Q9HCE9 1232 aaPredicted RBP9.96□□□□□ -0.82
CPSF7-222ENST00000544585 YEATS2Q9ULM3 1422 aa9.96□□□□□ -0.82
CPSF7-222ENST00000544585 PHF14O94880 888 aa9.95□□□□□ -0.82
CPSF7-222ENST00000544585 CEBPAP49715 358 aaPredicted RBP9.95□□□□□ -0.82
CPSF7-222ENST00000544585 CDHR5Q9HBB8 845 aa9.95□□□□□ -0.82
CPSF7-222ENST00000544585 NPDC1Q9NQX5 325 aaPredicted RBP9.95□□□□□ -0.82
CPSF7-222ENST00000544585 SPATA31D1Q6ZQQ2 1576 aa9.94□□□□□ -0.82
CPSF7-222ENST00000544585 SCAPERQ9BY12 1400 aa9.94□□□□□ -0.82
CPSF7-222ENST00000544585 SSTR3P32745 418 aaPredicted RBP9.94□□□□□ -0.82
CPSF7-222ENST00000544585 SKIV2LQ15477 1246 aaKnown RBP9.94□□□□□ -0.82
CPSF7-222ENST00000544585 TMUB1Q9BVT8 246 aa9.94□□□□□ -0.82
CPSF7-222ENST00000544585 CDK11AQ9UQ88 783 aaPredicted RBP9.94□□□□□ -0.82
CPSF7-222ENST00000544585 RAPGEF6Q8TEU7 1601 aa9.93□□□□□ -0.82
CPSF7-222ENST00000544585 NUP153P49790 1475 aaKnown RBP9.93□□□□□ -0.82
CPSF7-222ENST00000544585 MCM6Q14566 821 aa9.93□□□□□ -0.82
CPSF7-222ENST00000544585 RBM33Q96EV2 1170 aaKnown RBP9.93□□□□□ -0.82
CPSF7-222ENST00000544585 RIMS1Q86UR5 1692 aaKnown RBP9.93□□□□□ -0.82
CPSF7-222ENST00000544585 FRMPD1Q5SYB0 1578 aa9.92□□□□□ -0.82
CPSF7-222ENST00000544585 ATP10AO60312 1499 aa9.92□□□□□ -0.82
CPSF7-222ENST00000544585 PLCH2O75038 1416 aa9.92□□□□□ -0.82
CPSF7-222ENST00000544585 ESF1Q9H501 851 aaKnown RBP9.92□□□□□ -0.82
CPSF7-222ENST00000544585 SETD1BQ9UPS6 1966 aaKnown RBP9.92□□□□□ -0.82
CPSF7-222ENST00000544585 EFCAB5A4FU69 1503 aa9.92□□□□□ -0.82
CPSF7-222ENST00000544585 SLC34A2O95436 690 aa9.91□□□□□ -0.82
CPSF7-222ENST00000544585 CCDC82Q8N4S0 544 aa9.91□□□□□ -0.82
CPSF7-222ENST00000544585 BEGAINQ9BUH8 593 aa9.91□□□□□ -0.82
CPSF7-222ENST00000544585 MYT1LQ9UL68 1186 aa9.91□□□□□ -0.82
CPSF7-222ENST00000544585 ZFYVE16Q7Z3T8 1539 aa9.91□□□□□ -0.82
CPSF7-222ENST00000544585 ARHGEF40Q8TER5 1519 aa9.91□□□□□ -0.82
CPSF7-222ENST00000544585 RAD21O60216 631 aa9.9□□□□□ -0.82
CPSF7-222ENST00000544585 PDIA4P13667 645 aaKnown RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms