RNA–Protein interactions for RNA: ENST00000544474.5

PDZD4-209, Transcript of PDZ domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene PDZD4, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-209ENST00000544474 FAM13BQ9NYF5 915 aa16.3■□□□□ 0.2
PDZD4-209ENST00000544474 PARD3Q8TEW0 1356 aa16.3■□□□□ 0.2
PDZD4-209ENST00000544474 GOLGA2Q08379 1002 aa16.29■□□□□ 0.2
PDZD4-209ENST00000544474 MPNDQ8N594 471 aa16.29■□□□□ 0.2
PDZD4-209ENST00000544474 KIAA0586Q9BVV6 1533 aa16.29■□□□□ 0.2
PDZD4-209ENST00000544474 C9orf84Q5VXU9 1444 aa16.29■□□□□ 0.2
PDZD4-209ENST00000544474 CCDC144AA2RUR9 1427 aa16.28■□□□□ 0.2
PDZD4-209ENST00000544474 PER1O15534 1290 aaPredicted RBP16.28■□□□□ 0.2
PDZD4-209ENST00000544474 TNNQ9UQP3 1299 aa16.26■□□□□ 0.19
PDZD4-209ENST00000544474 RAPGEF6Q8TEU7 1601 aa16.25■□□□□ 0.19
PDZD4-209ENST00000544474 ADAMTS12P58397 1594 aa16.25■□□□□ 0.19
PDZD4-209ENST00000544474 TARBP1Q13395 1621 aaKnown RBP16.25■□□□□ 0.19
PDZD4-209ENST00000544474 DISP1Q96F81 1524 aa16.24■□□□□ 0.19
PDZD4-209ENST00000544474 FOXD4L5Q5VV16 416 aaPredicted RBP16.24■□□□□ 0.19
PDZD4-209ENST00000544474 FOXD4L4Q8WXT5 416 aaPredicted RBP16.24■□□□□ 0.19
PDZD4-209ENST00000544474 TRAK2O60296 914 aa16.24■□□□□ 0.19
PDZD4-209ENST00000544474 SAFB2Q14151 953 aaKnown RBP eCLIP16.24■□□□□ 0.19
PDZD4-209ENST00000544474 AFAP1Q8N556 730 aa16.24■□□□□ 0.19
PDZD4-209ENST00000544474 SPINK5Q9NQ38 1064 aaPredicted RBP16.24■□□□□ 0.19
PDZD4-209ENST00000544474 ADGRL2O95490 1459 aa16.24■□□□□ 0.19
PDZD4-209ENST00000544474 ARHGEF12Q9NZN5 1544 aa16.23■□□□□ 0.19
PDZD4-209ENST00000544474 KIAA0556O60303 1618 aa16.23■□□□□ 0.19
PDZD4-209ENST00000544474 ESPNB1AK53 854 aa16.22■□□□□ 0.19
PDZD4-209ENST00000544474 PRDM10Q9NQV6 1147 aa16.22■□□□□ 0.19
PDZD4-209ENST00000544474 MRC2Q9UBG0 1479 aa16.22■□□□□ 0.19
PDZD4-209ENST00000544474 CARMIL2Q6F5E8 1435 aa16.22■□□□□ 0.19
PDZD4-209ENST00000544474 PBRM1Q86U86 1689 aa16.22■□□□□ 0.19
PDZD4-209ENST00000544474 PLPPR3Q6T4P5 718 aa16.21■□□□□ 0.19
PDZD4-209ENST00000544474 BBXQ8WY36 941 aaPredicted RBP16.21■□□□□ 0.19
PDZD4-209ENST00000544474 TBC1D2Q9BYX2 928 aa16.21■□□□□ 0.19
PDZD4-209ENST00000544474 DISP3Q9P2K9 1392 aa16.2■□□□□ 0.18
PDZD4-209ENST00000544474 ITSN2Q9NZM3 1697 aa16.19■□□□□ 0.18
PDZD4-209ENST00000544474 FOXD4L6Q3SYB3 417 aaPredicted RBP16.19■□□□□ 0.18
PDZD4-209ENST00000544474 FOXD4L3Q6VB84 417 aaPredicted RBP16.19■□□□□ 0.18
PDZD4-209ENST00000544474 HSP90AB1P08238 724 aaKnown RBP16.19■□□□□ 0.18
PDZD4-209ENST00000544474 DUSP27Q5VZP5 1158 aa16.19■□□□□ 0.18
PDZD4-209ENST00000544474 ANP32BQ92688 251 aaKnown RBP16.19■□□□□ 0.18
PDZD4-209ENST00000544474 ADGBQ8N7X0 1667 aa16.18■□□□□ 0.18
PDZD4-209ENST00000544474 PPP2R1AP30153 589 aa16.18■□□□□ 0.18
PDZD4-209ENST00000544474 TESK2Q96S53 571 aa16.18■□□□□ 0.18
PDZD4-209ENST00000544474 PRAG1Q86YV5 1406 aa16.17■□□□□ 0.18
PDZD4-209ENST00000544474 ERBINQ96RT1 1412 aa16.17■□□□□ 0.18
PDZD4-209ENST00000544474 KDM2BQ8NHM5 1336 aa16.17■□□□□ 0.18
PDZD4-209ENST00000544474 PTPRGP23470 1445 aa16.17■□□□□ 0.18
PDZD4-209ENST00000544474 MCM4P33991 863 aa16.17■□□□□ 0.18
PDZD4-209ENST00000544474 DMRT2Q9Y5R5 561 aa16.17■□□□□ 0.18
PDZD4-209ENST00000544474 FTSJ3Q8IY81 847 aaKnown RBP16.16■□□□□ 0.18
PDZD4-209ENST00000544474 CDCA8Q53HL2 280 aa16.16■□□□□ 0.18
PDZD4-209ENST00000544474 KIAA1211Q6ZU35 1233 aa16.16■□□□□ 0.18
PDZD4-209ENST00000544474 R3HCC1Q9Y3T6 440 aaKnown RBP16.16■□□□□ 0.18
PDZD4-209ENST00000544474 HSCBQ8IWL3 235 aa16.15■□□□□ 0.18
PDZD4-209ENST00000544474 GRIN2AQ12879 1464 aa16.14■□□□□ 0.17
PDZD4-209ENST00000544474 PDZRN3Q9UPQ7 1066 aa16.14■□□□□ 0.17
PDZD4-209ENST00000544474 APBB1O00213 710 aa16.14■□□□□ 0.17
PDZD4-209ENST00000544474 BLMP54132 1417 aaPredicted RBP16.14■□□□□ 0.17
PDZD4-209ENST00000544474 PLEKHH2Q8IVE3 1493 aa16.14■□□□□ 0.17
PDZD4-209ENST00000544474 ZHX1Q9UKY1 873 aaPredicted RBP16.14■□□□□ 0.17
PDZD4-209ENST00000544474 MRE11P49959 708 aa16.13■□□□□ 0.17
PDZD4-209ENST00000544474 DNTTIP2Q5QJE6 756 aaKnown RBP16.13■□□□□ 0.17
PDZD4-209ENST00000544474 PLEKHH1Q9ULM0 1364 aa16.13■□□□□ 0.17
PDZD4-209ENST00000544474 RSPH4AQ5TD94 716 aa16.13■□□□□ 0.17
PDZD4-209ENST00000544474 MAP7D2Q96T17 732 aa16.13■□□□□ 0.17
PDZD4-209ENST00000544474 GRPEL1Q9HAV7 217 aa16.13■□□□□ 0.17
PDZD4-209ENST00000544474 MSNP26038 577 aaKnown RBP16.12■□□□□ 0.17
PDZD4-209ENST00000544474 FSD2A1L4K1 749 aa16.12■□□□□ 0.17
PDZD4-209ENST00000544474 PLCB2Q00722 1185 aa16.12■□□□□ 0.17
PDZD4-209ENST00000544474 GGT6Q6P531 493 aa16.12■□□□□ 0.17
PDZD4-209ENST00000544474 NAP1L2Q9ULW6 460 aaPredicted RBP16.12■□□□□ 0.17
PDZD4-209ENST00000544474 SLFN5Q08AF3 891 aa16.12■□□□□ 0.17
PDZD4-209ENST00000544474 IFT140Q96RY7 1462 aa16.11■□□□□ 0.17
PDZD4-209ENST00000544474 KIF3BO15066 747 aa16.11■□□□□ 0.17
PDZD4-209ENST00000544474 MAGI1Q96QZ7 1491 aaPredicted RBP16.11■□□□□ 0.17
PDZD4-209ENST00000544474 COL17A1Q9UMD9 1497 aaPredicted RBP16.1■□□□□ 0.17
PDZD4-209ENST00000544474 SMAP1Q8IYB5 467 aaPredicted RBP16.1■□□□□ 0.17
PDZD4-209ENST00000544474 C22orf23Q9BZE7 217 aa16.1■□□□□ 0.17
PDZD4-209ENST00000544474 ZMYM4Q5VZL5 1548 aa16.09■□□□□ 0.17
PDZD4-209ENST00000544474 ERBB4Q15303 1308 aa16.09■□□□□ 0.17
PDZD4-209ENST00000544474 ITPRIPQ8IWB1 547 aa16.09■□□□□ 0.17
PDZD4-209ENST00000544474 MAPK8IP2Q13387 824 aaPredicted RBP16.09■□□□□ 0.17
PDZD4-209ENST00000544474 TAF7LQ5H9L4 462 aa16.09■□□□□ 0.17
PDZD4-209ENST00000544474 INSRP06213 1382 aa16.08■□□□□ 0.17
PDZD4-209ENST00000544474 SHANK2Q9UPX8 1470 aa16.08■□□□□ 0.16
PDZD4-209ENST00000544474 FAM135AQ9P2D6 1515 aa16.08■□□□□ 0.16
PDZD4-209ENST00000544474 E9PSI1 815 aa16.07■□□□□ 0.16
PDZD4-209ENST00000544474 LNPKQ9C0E8 428 aa16.07■□□□□ 0.16
PDZD4-209ENST00000544474 PCDHB15Q9Y5E8 787 aa16.07■□□□□ 0.16
PDZD4-209ENST00000544474 NOL8Q76FK4 1167 aaKnown RBP16.07■□□□□ 0.16
PDZD4-209ENST00000544474 RNF214Q8ND24 703 aa16.07■□□□□ 0.16
PDZD4-209ENST00000544474 CEP170Q5SW79 1584 aa16.07■□□□□ 0.16
PDZD4-209ENST00000544474 CHMP4BQ9H444 224 aaKnown RBP16.07■□□□□ 0.16
PDZD4-209ENST00000544474 DDX49Q9Y6V7 483 aaKnown RBP16.07■□□□□ 0.16
PDZD4-209ENST00000544474 CGNL1Q0VF96 1302 aa16.06■□□□□ 0.16
PDZD4-209ENST00000544474 GPRASP1Q5JY77 1395 aa16.06■□□□□ 0.16
PDZD4-209ENST00000544474 PTMAP06454 111 aaKnown RBP16.06■□□□□ 0.16
PDZD4-209ENST00000544474 CHMP5Q9NZZ3 219 aa16.06■□□□□ 0.16
PDZD4-209ENST00000544474 XPCQ01831 940 aaPredicted RBP16.05■□□□□ 0.16
PDZD4-209ENST00000544474 A2MP01023 1474 aa16.05■□□□□ 0.16
PDZD4-209ENST00000544474 RLBP1P12271 317 aa16.04■□□□□ 0.16
PDZD4-209ENST00000544474 MAPK8IP3Q9UPT6 1336 aa16.04■□□□□ 0.16
PDZD4-209ENST00000544474 CCDC141Q6ZP82 1450 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms