RNA–Protein interactions for RNA: ENST00000543415.5

GTF2H3-213, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 5

Gene GTF2H3, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-213ENST00000543415 PPP1R18Q6NYC8 613 aa7.88□□□□□ -1.15
GTF2H3-213ENST00000543415 ZNF516Q92618 1163 aa7.88□□□□□ -1.15
GTF2H3-213ENST00000543415 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.88□□□□□ -1.15
GTF2H3-213ENST00000543415 ADGRG1Q9Y653 693 aa7.88□□□□□ -1.15
GTF2H3-213ENST00000543415 SMYD5Q6GMV2 418 aa7.87□□□□□ -1.15
GTF2H3-213ENST00000543415 TMEM134Q9H6X4 195 aa7.87□□□□□ -1.15
GTF2H3-213ENST00000543415 COPS2P61201 443 aa7.86□□□□□ -1.15
GTF2H3-213ENST00000543415 PRKD2Q9BZL6 878 aa7.86□□□□□ -1.15
GTF2H3-213ENST00000543415 V9GY48 417 aaPredicted RBP7.86□□□□□ -1.15
GTF2H3-213ENST00000543415 RCCD1A6NED2 376 aa7.85□□□□□ -1.15
GTF2H3-213ENST00000543415 TMUB1Q9BVT8 246 aa7.85□□□□□ -1.15
GTF2H3-213ENST00000543415 PCDHB3Q9Y5E6 796 aa7.85□□□□□ -1.15
GTF2H3-213ENST00000543415 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.84□□□□□ -1.15
GTF2H3-213ENST00000543415 GPR37O15354 613 aa7.84□□□□□ -1.15
GTF2H3-213ENST00000543415 ZPR1O75312 459 aa7.84□□□□□ -1.15
GTF2H3-213ENST00000543415 OATP04181 439 aa7.84□□□□□ -1.15
GTF2H3-213ENST00000543415 KMT5BQ4FZB7 885 aa7.84□□□□□ -1.15
GTF2H3-213ENST00000543415 Q6ZNB5 142 aa7.84□□□□□ -1.15
GTF2H3-213ENST00000543415 HIC1Q14526 733 aa7.83□□□□□ -1.16
GTF2H3-213ENST00000543415 NKX2-3Q8TAU0 364 aa7.83□□□□□ -1.16
GTF2H3-213ENST00000543415 ACTN4O43707 911 aaKnown RBP7.81□□□□□ -1.16
GTF2H3-213ENST00000543415 GFRA3O60609 400 aa7.81□□□□□ -1.16
GTF2H3-213ENST00000543415 RSPH4AQ5TD94 716 aa7.81□□□□□ -1.16
GTF2H3-213ENST00000543415 FAM161AQ3B820 660 aa7.8□□□□□ -1.16
GTF2H3-213ENST00000543415 BLOC1S3Q6QNY0 202 aa7.8□□□□□ -1.16
GTF2H3-213ENST00000543415 PXYLP1Q8TE99 480 aa7.8□□□□□ -1.16
GTF2H3-213ENST00000543415 CFHP08603 1231 aa7.79□□□□□ -1.16
GTF2H3-213ENST00000543415 GNPATO15228 680 aa7.78□□□□□ -1.16
GTF2H3-213ENST00000543415 FECHP22830 423 aa7.78□□□□□ -1.16
GTF2H3-213ENST00000543415 NRG2O14511 850 aaPredicted RBP7.77□□□□□ -1.17
GTF2H3-213ENST00000543415 METTL3Q86U44 580 aaKnown RBP7.77□□□□□ -1.17
GTF2H3-213ENST00000543415 NR1I2O75469 434 aa7.76□□□□□ -1.17
GTF2H3-213ENST00000543415 SLC10A3P09131 477 aa7.76□□□□□ -1.17
GTF2H3-213ENST00000543415 GPIHBP1Q8IV16 184 aa7.76□□□□□ -1.17
GTF2H3-213ENST00000543415 TRAF7Q6Q0C0 670 aa7.75□□□□□ -1.17
GTF2H3-213ENST00000543415 RNF223E7ERA6 249 aa7.74□□□□□ -1.17
GTF2H3-213ENST00000543415 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.73□□□□□ -1.17
GTF2H3-213ENST00000543415 ANKLE1Q8NAG6 615 aa7.73□□□□□ -1.17
GTF2H3-213ENST00000543415 DAXXQ9UER7 740 aaPredicted RBP7.73□□□□□ -1.17
GTF2H3-213ENST00000543415 PDZRN3Q9UPQ7 1066 aa7.73□□□□□ -1.17
GTF2H3-213ENST00000543415 TLL1O43897 1013 aa7.72□□□□□ -1.17
GTF2H3-213ENST00000543415 ADH1BP00325 375 aa7.72□□□□□ -1.17
GTF2H3-213ENST00000543415 SLC19A1P41440 591 aa7.72□□□□□ -1.17
GTF2H3-213ENST00000543415 LMOD2Q6P5Q4 547 aa7.71□□□□□ -1.18
GTF2H3-213ENST00000543415 S1PR4O95977 384 aa7.7□□□□□ -1.18
GTF2H3-213ENST00000543415 SCUBE3Q8IX30 993 aa7.7□□□□□ -1.18
GTF2H3-213ENST00000543415 TULP1O00294 542 aaPredicted RBP7.69□□□□□ -1.18
GTF2H3-213ENST00000543415 SULF1Q8IWU6 871 aa7.69□□□□□ -1.18
GTF2H3-213ENST00000543415 RDH13Q8NBN7 331 aa7.69□□□□□ -1.18
GTF2H3-213ENST00000543415 SLC6A16Q9GZN6 736 aa7.69□□□□□ -1.18
GTF2H3-213ENST00000543415 SPRYD7Q5W111 196 aa7.68□□□□□ -1.18
GTF2H3-213ENST00000543415 PHOX2BQ99453 314 aa7.68□□□□□ -1.18
GTF2H3-213ENST00000543415 DDX11L8A8MPP1 907 aa7.67□□□□□ -1.18
GTF2H3-213ENST00000543415 LCE2BO14633 110 aa7.67□□□□□ -1.18
GTF2H3-213ENST00000543415 PUS10Q3MIT2 529 aaKnown RBP7.67□□□□□ -1.18
GTF2H3-213ENST00000543415 ZNF598Q86UK7 904 aaKnown RBP7.67□□□□□ -1.18
GTF2H3-213ENST00000543415 NLRP7Q8WX94 980 aa7.67□□□□□ -1.18
GTF2H3-213ENST00000543415 SPSB2Q99619 263 aa7.67□□□□□ -1.18
GTF2H3-213ENST00000543415 PPEF1O14829 653 aaPredicted RBP7.66□□□□□ -1.18
GTF2H3-213ENST00000543415 ATP6V1AP38606 617 aa7.66□□□□□ -1.18
GTF2H3-213ENST00000543415 MORN1Q5T089 497 aa7.65□□□□□ -1.18
GTF2H3-213ENST00000543415 EMID1Q96A84 441 aaPredicted RBP7.65□□□□□ -1.18
GTF2H3-213ENST00000543415 GCGRP47871 477 aa7.64□□□□□ -1.19
GTF2H3-213ENST00000543415 PRR20EP86478 221 aa7.64□□□□□ -1.19
GTF2H3-213ENST00000543415 PRR20CP86479 221 aa7.64□□□□□ -1.19
GTF2H3-213ENST00000543415 PRR20DP86480 221 aa7.64□□□□□ -1.19
GTF2H3-213ENST00000543415 PRR20BP86481 221 aa7.64□□□□□ -1.19
GTF2H3-213ENST00000543415 PRR20AP86496 221 aa7.64□□□□□ -1.19
GTF2H3-213ENST00000543415 FUT2Q10981 343 aa7.64□□□□□ -1.19
GTF2H3-213ENST00000543415 MAP2K5Q13163 448 aa7.64□□□□□ -1.19
GTF2H3-213ENST00000543415 LIAT1Q6ZQX7 453 aa7.64□□□□□ -1.19
GTF2H3-213ENST00000543415 GRIPAP1Q4V328 841 aa7.63□□□□□ -1.19
GTF2H3-213ENST00000543415 ZNF697Q5TEC3 545 aa7.63□□□□□ -1.19
GTF2H3-213ENST00000543415 TRIM67Q6ZTA4 783 aa7.63□□□□□ -1.19
GTF2H3-213ENST00000543415 ZC3H15Q8WU90 426 aaKnown RBP7.63□□□□□ -1.19
GTF2H3-213ENST00000543415 SALL2Q9Y467 1007 aaPredicted RBP7.63□□□□□ -1.19
GTF2H3-213ENST00000543415 FMNL1O95466 1100 aaPredicted RBP7.62□□□□□ -1.19
GTF2H3-213ENST00000543415 IRF6O14896 467 aa7.61□□□□□ -1.19
GTF2H3-213ENST00000543415 DGAT1O75907 488 aa7.61□□□□□ -1.19
GTF2H3-213ENST00000543415 PKDCCQ504Y2 493 aa7.61□□□□□ -1.19
GTF2H3-213ENST00000543415 CCDC102AQ96A19 550 aa7.61□□□□□ -1.19
GTF2H3-213ENST00000543415 THAP11Q96EK4 314 aa7.61□□□□□ -1.19
GTF2H3-213ENST00000543415 ZMYND10O75800 440 aa7.6□□□□□ -1.19
GTF2H3-213ENST00000543415 RPIAP49247 311 aa7.6□□□□□ -1.19
GTF2H3-213ENST00000543415 SLC27A5Q9Y2P5 690 aa7.6□□□□□ -1.19
GTF2H3-213ENST00000543415 PLA2G2CQ5R387 149 aa7.59□□□□□ -1.19
GTF2H3-213ENST00000543415 MINK1Q8N4C8 1332 aaPredicted RBP7.58□□□□□ -1.2
GTF2H3-213ENST00000543415 GDF9O60383 454 aa7.58□□□□□ -1.2
GTF2H3-213ENST00000543415 ZNF787Q6DD87 383 aa7.58□□□□□ -1.2
GTF2H3-213ENST00000543415 BRICD5Q6PL45 260 aa7.58□□□□□ -1.2
GTF2H3-213ENST00000543415 BARGINQ6ZT62 677 aa7.58□□□□□ -1.2
GTF2H3-213ENST00000543415 CD2BP2O95400 341 aaKnown RBP7.57□□□□□ -1.2
GTF2H3-213ENST00000543415 Q3C1V9 767 aa7.57□□□□□ -1.2
GTF2H3-213ENST00000543415 MSS51Q4VC12 460 aa7.57□□□□□ -1.2
GTF2H3-213ENST00000543415 FAM160A2Q8N612 972 aaPredicted RBP7.57□□□□□ -1.2
GTF2H3-213ENST00000543415 FCF1Q9Y324 198 aaKnown RBP7.57□□□□□ -1.2
GTF2H3-213ENST00000543415 TNFRSF10AO00220 468 aa7.56□□□□□ -1.2
GTF2H3-213ENST00000543415 CD46P15529 392 aa7.56□□□□□ -1.2
GTF2H3-213ENST00000543415 ERICH6Q7L0X2 663 aa7.56□□□□□ -1.2
GTF2H3-213ENST00000543415 FAM187AA6NFU0 413 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms