RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 RNF17Q9BXT8 1623 aaKnown RBP22.18■■□□□ 1.14
KDM2B-216ENST00000543025 PER1O15534 1290 aaPredicted RBP22.18■■□□□ 1.14
KDM2B-216ENST00000543025 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.17■■□□□ 1.141e-6■■■■□ 21.3
KDM2B-216ENST00000543025 MROH1Q8NDA8 1641 aa22.17■■□□□ 1.14
KDM2B-216ENST00000543025 WASHC2CQ9Y4E1 1318 aa22.17■■□□□ 1.14
KDM2B-216ENST00000543025 KIF3BO15066 747 aa22.16■■□□□ 1.14
KDM2B-216ENST00000543025 RRP1P56182 461 aaKnown RBP22.16■■□□□ 1.14
KDM2B-216ENST00000543025 PDE3BQ13370 1112 aa22.15■■□□□ 1.14
KDM2B-216ENST00000543025 TESK2Q96S53 571 aa22.13■■□□□ 1.13
KDM2B-216ENST00000543025 DISP3Q9P2K9 1392 aa22.12■■□□□ 1.13
KDM2B-216ENST00000543025 RCAN3Q9UKA8 241 aa22.12■■□□□ 1.13
KDM2B-216ENST00000543025 AGLP35573 1532 aa22.12■■□□□ 1.13
KDM2B-216ENST00000543025 NOP58Q9Y2X3 529 aaKnown RBP22.12■■□□□ 1.13
KDM2B-216ENST00000543025 INSRP06213 1382 aa22.11■■□□□ 1.13
KDM2B-216ENST00000543025 VWDEQ8N2E2 1590 aa22.1■■□□□ 1.13
KDM2B-216ENST00000543025 TMF1P82094 1093 aa22.08■■□□□ 1.13
KDM2B-216ENST00000543025 BCL11AQ9H165 835 aa22.08■■□□□ 1.13
KDM2B-216ENST00000543025 SALL2Q9Y467 1007 aaPredicted RBP22.08■■□□□ 1.12
KDM2B-216ENST00000543025 CEP152O94986 1710 aa22.07■■□□□ 1.12
KDM2B-216ENST00000543025 ANP32AP39687 249 aaKnown RBP22.07■■□□□ 1.12
KDM2B-216ENST00000543025 BLMP54132 1417 aaPredicted RBP22.06■■□□□ 1.12
KDM2B-216ENST00000543025 CC2D1BQ5T0F9 858 aaKnown RBP22.06■■□□□ 1.12
KDM2B-216ENST00000543025 PANK3Q9H999 370 aa22.06■■□□□ 1.12
KDM2B-216ENST00000543025 GGT6Q6P531 493 aa22.05■■□□□ 1.12
KDM2B-216ENST00000543025 EXOC6Q8TAG9 804 aa22.05■■□□□ 1.12
KDM2B-216ENST00000543025 KANK1Q14678 1352 aa22.04■■□□□ 1.12
KDM2B-216ENST00000543025 TET3O43151 1660 aa22.04■■□□□ 1.12
KDM2B-216ENST00000543025 IPO9Q96P70 1041 aaKnown RBP22.02■■□□□ 1.12
KDM2B-216ENST00000543025 ZC3H13Q5T200 1668 aaKnown RBP22.01■■□□□ 1.11
KDM2B-216ENST00000543025 ABCC3O15438 1527 aa22.01■■□□□ 1.11
KDM2B-216ENST00000543025 LMTK2Q8IWU2 1503 aa22■■□□□ 1.11
KDM2B-216ENST00000543025 CDCA7LQ96GN5 454 aa22■■□□□ 1.11
KDM2B-216ENST00000543025 PAK3O75914 559 aaPredicted RBP21.99■■□□□ 1.11
KDM2B-216ENST00000543025 EFCAB6Q5THR3 1501 aa21.98■■□□□ 1.11
KDM2B-216ENST00000543025 CAMSAP1Q5T5Y3 1602 aa21.98■■□□□ 1.11
KDM2B-216ENST00000543025 TCERG1O14776 1098 aaKnown RBP21.98■■□□□ 1.11
KDM2B-216ENST00000543025 MADDQ8WXG6 1647 aa21.97■■□□□ 1.11
KDM2B-216ENST00000543025 MLECQ14165 292 aa21.96■■□□□ 1.11
KDM2B-216ENST00000543025 IQGAP1P46940 1657 aa21.95■■□□□ 1.1
KDM2B-216ENST00000543025 CLTCQ00610 1675 aaKnown RBP21.95■■□□□ 1.1
KDM2B-216ENST00000543025 TRPM2O94759 1503 aa21.93■■□□□ 1.1
KDM2B-216ENST00000543025 ZBTB47Q9UFB7 747 aaPredicted RBP21.93■■□□□ 1.1
KDM2B-216ENST00000543025 SPHKAPQ2M3C7 1700 aa21.92■■□□□ 1.1
KDM2B-216ENST00000543025 STAC3Q96MF2 364 aa21.91■■□□□ 1.1
KDM2B-216ENST00000543025 KNSTRNQ9Y448 316 aa21.9■■□□□ 1.1
KDM2B-216ENST00000543025 SYNMO15061 1565 aa21.9■■□□□ 1.1
KDM2B-216ENST00000543025 MS4A1P11836 297 aa21.89■■□□□ 1.1
KDM2B-216ENST00000543025 CDCA8Q53HL2 280 aa21.89■■□□□ 1.1
KDM2B-216ENST00000543025 PPP6R1Q9UPN7 881 aa21.89■■□□□ 1.1
KDM2B-216ENST00000543025 SCAF11Q99590 1463 aaKnown RBP21.89■■□□□ 1.09
KDM2B-216ENST00000543025 NPATQ14207 1427 aa21.89■■□□□ 1.09
KDM2B-216ENST00000543025 NBR1Q14596 966 aa21.88■■□□□ 1.09
KDM2B-216ENST00000543025 ADAMTS8Q9UP79 889 aa21.88■■□□□ 1.09
KDM2B-216ENST00000543025 PTPRTO14522 1441 aa21.88■■□□□ 1.09
KDM2B-216ENST00000543025 FER1L4A9Z1Z3 1794 aa21.88■■□□□ 1.09
KDM2B-216ENST00000543025 CFAP65Q6ZU64 1925 aaKnown RBP21.87■■□□□ 1.09
KDM2B-216ENST00000543025 PLIN1O60240 522 aa21.87■■□□□ 1.09
KDM2B-216ENST00000543025 PDE4AP27815 886 aa21.86■■□□□ 1.09
KDM2B-216ENST00000543025 PPP2R1AP30153 589 aa21.86■■□□□ 1.09
KDM2B-216ENST00000543025 ARHGAP31Q2M1Z3 1444 aa21.85■■□□□ 1.09
KDM2B-216ENST00000543025 CLTCL1P53675 1640 aa21.85■■□□□ 1.09
KDM2B-216ENST00000543025 DEKP35659 375 aaKnown RBP21.85■■□□□ 1.09
KDM2B-216ENST00000543025 WDR43Q15061 677 aaKnown RBP eCLIP21.85■■□□□ 1.09
KDM2B-216ENST00000543025 AMER1Q5JTC6 1135 aaPredicted RBP21.85■■□□□ 1.09
KDM2B-216ENST00000543025 CRBNQ96SW2 442 aa21.84■■□□□ 1.09
KDM2B-216ENST00000543025 BACH2Q9BYV9 841 aa21.84■■□□□ 1.09
KDM2B-216ENST00000543025 MROH2AA6NES4 1674 aa21.84■■□□□ 1.09
KDM2B-216ENST00000543025 ASXL1Q8IXJ9 1541 aa21.83■■□□□ 1.09
KDM2B-216ENST00000543025 PREX1Q8TCU6 1659 aa21.82■■□□□ 1.08
KDM2B-216ENST00000543025 EIF3AQ14152 1382 aaKnown RBP21.82■■□□□ 1.08
KDM2B-216ENST00000543025 PIK3C2GO75747 1445 aa21.8■■□□□ 1.08
KDM2B-216ENST00000543025 ESF1Q9H501 851 aaKnown RBP21.8■■□□□ 1.08
KDM2B-216ENST00000543025 PLEKHH1Q9ULM0 1364 aa21.8■■□□□ 1.08
KDM2B-216ENST00000543025 NPM2Q86SE8 214 aaKnown RBP21.8■■□□□ 1.08
KDM2B-216ENST00000543025 MYOM1P52179 1685 aa21.8■■□□□ 1.08
KDM2B-216ENST00000543025 ADAMTSL3P82987 1691 aa21.8■■□□□ 1.08
KDM2B-216ENST00000543025 KIAA1210Q9ULL0 1709 aa21.79■■□□□ 1.08
KDM2B-216ENST00000543025 NPC1L1Q9UHC9 1359 aa21.79■■□□□ 1.08
KDM2B-216ENST00000543025 NEURL4Q96JN8 1562 aa21.78■■□□□ 1.08
KDM2B-216ENST00000543025 DUSP27Q5VZP5 1158 aa21.78■■□□□ 1.08
KDM2B-216ENST00000543025 ZNF521Q96K83 1311 aa21.78■■□□□ 1.08
KDM2B-216ENST00000543025 UGGT1Q9NYU2 1555 aa21.78■■□□□ 1.08
KDM2B-216ENST00000543025 NOS1P29475 1434 aa21.77■■□□□ 1.08
KDM2B-216ENST00000543025 ZMYM3Q14202 1370 aa21.77■■□□□ 1.08
KDM2B-216ENST00000543025 KDM5AP29375 1690 aaKnown RBP21.76■■□□□ 1.07
KDM2B-216ENST00000543025 RIMS1Q86UR5 1692 aaKnown RBP21.76■■□□□ 1.07
KDM2B-216ENST00000543025 C3P01024 1663 aa21.76■■□□□ 1.07
KDM2B-216ENST00000543025 GOLGA2Q08379 1002 aa21.76■■□□□ 1.07
KDM2B-216ENST00000543025 RTL5Q5HYW3 569 aaPredicted RBP21.76■■□□□ 1.07
KDM2B-216ENST00000543025 ERVK-7P63135 1459 aa21.75■■□□□ 1.07
KDM2B-216ENST00000543025 C20orf194Q5TEA3 1177 aa21.74■■□□□ 1.07
KDM2B-216ENST00000543025 SPATA31D1Q6ZQQ2 1576 aa21.74■■□□□ 1.07
KDM2B-216ENST00000543025 SLC24A1O60721 1099 aa21.73■■□□□ 1.07
KDM2B-216ENST00000543025 PIK3C2BO00750 1634 aa21.73■■□□□ 1.07
KDM2B-216ENST00000543025 FBXO31Q5XUX0 539 aaPredicted RBP21.73■■□□□ 1.07
KDM2B-216ENST00000543025 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.71■■□□□ 1.07
KDM2B-216ENST00000543025 MYOM2P54296 1465 aa21.71■■□□□ 1.07
KDM2B-216ENST00000543025 KDM2BQ8NHM5 1336 aa21.71■■□□□ 1.07
KDM2B-216ENST00000543025 KIF1BO60333 1816 aa21.71■■□□□ 1.07
KDM2B-216ENST00000543025 SLFN5Q08AF3 891 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms