RNA–Protein interactions for RNA: ENST00000542866.2

KDM3B-209, Transcript of lysine demethylase 3B, humanhuman

TSL 2 BASIC

Gene KDM3B, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-209ENST00000542866 POGZQ7Z3K3 1410 aa6.9□□□□□ -1.31
KDM3B-209ENST00000542866 PDIA4P13667 645 aaKnown RBP6.9□□□□□ -1.31
KDM3B-209ENST00000542866 CENPQQ7L2Z9 268 aaPredicted RBP6.89□□□□□ -1.31
KDM3B-209ENST00000542866 TTC37Q6PGP7 1564 aa6.89□□□□□ -1.31
KDM3B-209ENST00000542866 POLR1AO95602 1720 aaPredicted RBP6.89□□□□□ -1.31
KDM3B-209ENST00000542866 PDE4CQ08493 712 aa6.89□□□□□ -1.31
KDM3B-209ENST00000542866 C8orf34Q49A92 452 aa6.88□□□□□ -1.31
KDM3B-209ENST00000542866 PANK3Q9H999 370 aa6.88□□□□□ -1.31
KDM3B-209ENST00000542866 KDM5CP41229 1560 aa6.88□□□□□ -1.31
KDM3B-209ENST00000542866 SENP3Q9H4L4 574 aaPredicted RBP6.88□□□□□ -1.31
KDM3B-209ENST00000542866 ADAMTS8Q9UP79 889 aa6.88□□□□□ -1.31
KDM3B-209ENST00000542866 MBD5Q9P267 1494 aa6.87□□□□□ -1.31
KDM3B-209ENST00000542866 NBPF1Q3BBV0 1214 aa6.87□□□□□ -1.31
KDM3B-209ENST00000542866 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.87□□□□□ -1.31
KDM3B-209ENST00000542866 WDR43Q15061 677 aaKnown RBP eCLIP6.87□□□□□ -1.31
KDM3B-209ENST00000542866 TPRNQ4KMQ1 711 aa6.87□□□□□ -1.31
KDM3B-209ENST00000542866 SLKQ9H2G2 1235 aaPredicted RBP6.87□□□□□ -1.31
KDM3B-209ENST00000542866 MYO5CQ9NQX4 1742 aa6.87□□□□□ -1.31
KDM3B-209ENST00000542866 RSPH6AQ9H0K4 717 aa6.87□□□□□ -1.31
KDM3B-209ENST00000542866 KDM2BQ8NHM5 1336 aa6.86□□□□□ -1.31
KDM3B-209ENST00000542866 RTEL1-TNFRSF6BF6WH68 1400 aa6.86□□□□□ -1.31
KDM3B-209ENST00000542866 PER1O15534 1290 aaPredicted RBP6.86□□□□□ -1.31
KDM3B-209ENST00000542866 HDGFP51858 240 aaKnown RBP6.86□□□□□ -1.31
KDM3B-209ENST00000542866 PARD3Q8TEW0 1356 aa6.86□□□□□ -1.31
KDM3B-209ENST00000542866 RALGAPBQ86X10 1494 aa6.86□□□□□ -1.31
KDM3B-209ENST00000542866 A2MP01023 1474 aa6.86□□□□□ -1.31
KDM3B-209ENST00000542866 FAM43AQ8N2R8 423 aa6.86□□□□□ -1.31
KDM3B-209ENST00000542866 POGKQ9P215 609 aa6.86□□□□□ -1.31
KDM3B-209ENST00000542866 DNMT1P26358 1616 aaKnown RBP6.86□□□□□ -1.31
KDM3B-209ENST00000542866 SHANK2Q9UPX8 1470 aa6.85□□□□□ -1.31
KDM3B-209ENST00000542866 ARAP3Q8WWN8 1544 aa6.85□□□□□ -1.31
KDM3B-209ENST00000542866 CCDC144AA2RUR9 1427 aa6.85□□□□□ -1.31
KDM3B-209ENST00000542866 CFAP74Q9C0B2 1584 aa6.85□□□□□ -1.31
KDM3B-209ENST00000542866 ABCA9Q8IUA7 1624 aa6.85□□□□□ -1.31
KDM3B-209ENST00000542866 PREX2Q70Z35 1606 aa6.85□□□□□ -1.31
KDM3B-209ENST00000542866 UHRF1BP1Q6BDS2 1440 aa6.84□□□□□ -1.31
KDM3B-209ENST00000542866 GOLGA2Q08379 1002 aa6.84□□□□□ -1.31
KDM3B-209ENST00000542866 TSPOAP1O95153 1857 aa6.84□□□□□ -1.31
KDM3B-209ENST00000542866 DUSP27Q5VZP5 1158 aa6.84□□□□□ -1.31
KDM3B-209ENST00000542866 CCDC146Q8IYE0 955 aa6.84□□□□□ -1.31
KDM3B-209ENST00000542866 PPP6R1Q9UPN7 881 aa6.84□□□□□ -1.31
KDM3B-209ENST00000542866 ABCC1P33527 1531 aa6.84□□□□□ -1.31
KDM3B-209ENST00000542866 SAMD9LQ8IVG5 1584 aa6.84□□□□□ -1.32
KDM3B-209ENST00000542866 DIP2BQ9P265 1576 aa6.83□□□□□ -1.32
KDM3B-209ENST00000542866 ATP7AQ04656 1500 aa6.83□□□□□ -1.32
KDM3B-209ENST00000542866 DUOX2Q9NRD8 1548 aa6.83□□□□□ -1.32
KDM3B-209ENST00000542866 CANXP27824 592 aaKnown RBP6.83□□□□□ -1.32
KDM3B-209ENST00000542866 TMF1P82094 1093 aa6.83□□□□□ -1.32
KDM3B-209ENST00000542866 BECN1Q14457 450 aa6.83□□□□□ -1.32
KDM3B-209ENST00000542866 ERBINQ96RT1 1412 aa6.83□□□□□ -1.32
KDM3B-209ENST00000542866 ATP10AO60312 1499 aa6.83□□□□□ -1.32
KDM3B-209ENST00000542866 SPRYD3Q8NCJ5 442 aa6.83□□□□□ -1.32
KDM3B-209ENST00000542866 KNSTRNQ9Y448 316 aa6.83□□□□□ -1.32
KDM3B-209ENST00000542866 BCAR3O75815 825 aa6.82□□□□□ -1.32
KDM3B-209ENST00000542866 YEATS2Q9ULM3 1422 aa6.82□□□□□ -1.32
KDM3B-209ENST00000542866 EID1Q9Y6B2 187 aa6.82□□□□□ -1.32
KDM3B-209ENST00000542866 ARHGEF12Q9NZN5 1544 aa6.82□□□□□ -1.32
KDM3B-209ENST00000542866 GLI2P10070 1586 aa6.82□□□□□ -1.32
KDM3B-209ENST00000542866 ARHGEF5Q12774 1597 aa6.82□□□□□ -1.32
KDM3B-209ENST00000542866 SEC24BO95487 1268 aa6.82□□□□□ -1.32
KDM3B-209ENST00000542866 MAGI2Q86UL8 1455 aa6.82□□□□□ -1.32
KDM3B-209ENST00000542866 BCL11BQ9C0K0 894 aaPredicted RBP6.82□□□□□ -1.32
KDM3B-209ENST00000542866 DISP3Q9P2K9 1392 aa6.82□□□□□ -1.32
KDM3B-209ENST00000542866 PLEKHH1Q9ULM0 1364 aa6.82□□□□□ -1.32
KDM3B-209ENST00000542866 MLH3Q9UHC1 1453 aa6.81□□□□□ -1.32
KDM3B-209ENST00000542866 IGHDP01880 384 aa6.81□□□□□ -1.32
KDM3B-209ENST00000542866 FGD1P98174 961 aa6.81□□□□□ -1.32
KDM3B-209ENST00000542866 GZF1Q9H116 711 aaPredicted RBP6.81□□□□□ -1.32
KDM3B-209ENST00000542866 RRAGDQ9NQL2 400 aaPredicted RBP6.81□□□□□ -1.32
KDM3B-209ENST00000542866 ZFYVE16Q7Z3T8 1539 aa6.81□□□□□ -1.32
KDM3B-209ENST00000542866 BLMP54132 1417 aaPredicted RBP6.81□□□□□ -1.32
KDM3B-209ENST00000542866 L1TD1Q5T7N2 865 aaKnown RBP6.81□□□□□ -1.32
KDM3B-209ENST00000542866 NAP1L5Q96NT1 182 aaPredicted RBP6.81□□□□□ -1.32
KDM3B-209ENST00000542866 SLC52A1Q9NWF4 448 aa6.81□□□□□ -1.32
KDM3B-209ENST00000542866 CDC42BPAQ5VT25 1732 aa6.81□□□□□ -1.32
KDM3B-209ENST00000542866 ADGRL2O95490 1459 aa6.81□□□□□ -1.32
KDM3B-209ENST00000542866 PPP2R1AP30153 589 aa6.81□□□□□ -1.32
KDM3B-209ENST00000542866 KIF13AQ9H1H9 1805 aa6.8□□□□□ -1.32
KDM3B-209ENST00000542866 APAF1O14727 1248 aa6.8□□□□□ -1.32
KDM3B-209ENST00000542866 CEBPAP49715 358 aaPredicted RBP6.8□□□□□ -1.32
KDM3B-209ENST00000542866 SLFN5Q08AF3 891 aa6.8□□□□□ -1.32
KDM3B-209ENST00000542866 NUTM2DQ5VT03 806 aaPredicted RBP6.8□□□□□ -1.32
KDM3B-209ENST00000542866 TESK2Q96S53 571 aa6.8□□□□□ -1.32
KDM3B-209ENST00000542866 UPF2Q9HAU5 1272 aaKnown RBP6.8□□□□□ -1.32
KDM3B-209ENST00000542866 COG6Q9Y2V7 657 aa6.8□□□□□ -1.32
KDM3B-209ENST00000542866 ZMYM4Q5VZL5 1548 aa6.79□□□□□ -1.32
KDM3B-209ENST00000542866 SPINK5Q9NQ38 1064 aaPredicted RBP6.79□□□□□ -1.32
KDM3B-209ENST00000542866 VGFO15240 615 aaPredicted RBP6.79□□□□□ -1.32
KDM3B-209ENST00000542866 FBXO31Q5XUX0 539 aaPredicted RBP6.79□□□□□ -1.32
KDM3B-209ENST00000542866 A0A0U1RQG5 324 aaPredicted RBP6.78□□□□□ -1.32
KDM3B-209ENST00000542866 PANK1Q8TE04 598 aa6.78□□□□□ -1.32
KDM3B-209ENST00000542866 USP19O94966 1318 aa6.78□□□□□ -1.32
KDM3B-209ENST00000542866 GOLGA6L3A6NEY3 463 aa6.78□□□□□ -1.32
KDM3B-209ENST00000542866 NEUROD2Q15784 382 aa6.78□□□□□ -1.32
KDM3B-209ENST00000542866 C14orf37Q86TY3 774 aa6.78□□□□□ -1.32
KDM3B-209ENST00000542866 PRAG1Q86YV5 1406 aa6.78□□□□□ -1.32
KDM3B-209ENST00000542866 GLIPR1L2Q4G1C9 344 aa6.77□□□□□ -1.32
KDM3B-209ENST00000542866 THEMISQ8N1K5 641 aaPredicted RBP6.77□□□□□ -1.32
KDM3B-209ENST00000542866 PNNQ9H307 717 aaKnown RBP6.77□□□□□ -1.32
KDM3B-209ENST00000542866 HECW2Q9P2P5 1572 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms