RNA–Protein interactions for RNA: ENST00000542381.1

SRGAP1-204, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 360 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-204ENST00000542381 V9GY48 417 aaPredicted RBP13.49□□□□□ -0.25
SRGAP1-204ENST00000542381 P3H3Q8IVL6 736 aa13.48□□□□□ -0.25
SRGAP1-204ENST00000542381 RCCD1A6NED2 376 aa13.47□□□□□ -0.25
SRGAP1-204ENST00000542381 BLOC1S3Q6QNY0 202 aa13.47□□□□□ -0.25
SRGAP1-204ENST00000542381 PRR14Q9BWN1 585 aa13.46□□□□□ -0.25
SRGAP1-204ENST00000542381 FCHSD2O94868 740 aa13.45□□□□□ -0.26
SRGAP1-204ENST00000542381 GGCXP38435 758 aa13.44□□□□□ -0.26
SRGAP1-204ENST00000542381 NRG2O14511 850 aaPredicted RBP13.41□□□□□ -0.26
SRGAP1-204ENST00000542381 TLL1O43897 1013 aa13.41□□□□□ -0.26
SRGAP1-204ENST00000542381 TRAF7Q6Q0C0 670 aa13.41□□□□□ -0.26
SRGAP1-204ENST00000542381 TMUB1Q9BVT8 246 aa13.41□□□□□ -0.26
SRGAP1-204ENST00000542381 SLC10A3P09131 477 aa13.4□□□□□ -0.26
SRGAP1-204ENST00000542381 ACTN4O43707 911 aaKnown RBP13.39□□□□□ -0.27
SRGAP1-204ENST00000542381 CFHP08603 1231 aa13.39□□□□□ -0.27
SRGAP1-204ENST00000542381 RBM26Q5T8P6 1007 aaKnown RBP13.38□□□□□ -0.27
SRGAP1-204ENST00000542381 RNF223E7ERA6 249 aa13.37□□□□□ -0.27
SRGAP1-204ENST00000542381 KMT5BQ4FZB7 885 aa13.37□□□□□ -0.27
SRGAP1-204ENST00000542381 PXYLP1Q8TE99 480 aa13.37□□□□□ -0.27
SRGAP1-204ENST00000542381 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.36□□□□□ -0.27
SRGAP1-204ENST00000542381 PDZRN3Q9UPQ7 1066 aa13.36□□□□□ -0.27
SRGAP1-204ENST00000542381 TESPA1A2RU30 521 aaPredicted RBP13.35□□□□□ -0.27
SRGAP1-204ENST00000542381 EMID1Q96A84 441 aaPredicted RBP13.35□□□□□ -0.27
SRGAP1-204ENST00000542381 PPEF1O14829 653 aaPredicted RBP13.33□□□□□ -0.28
SRGAP1-204ENST00000542381 OATP04181 439 aa13.33□□□□□ -0.28
SRGAP1-204ENST00000542381 FECHP22830 423 aa13.32□□□□□ -0.28
SRGAP1-204ENST00000542381 PLCB2Q00722 1185 aa13.32□□□□□ -0.28
SRGAP1-204ENST00000542381 HIC1Q14526 733 aa13.32□□□□□ -0.28
SRGAP1-204ENST00000542381 S1PR4O95977 384 aa13.31□□□□□ -0.28
SRGAP1-204ENST00000542381 METTL3Q86U44 580 aaKnown RBP13.31□□□□□ -0.28
SRGAP1-204ENST00000542381 SLC19A1P41440 591 aa13.3□□□□□ -0.28
SRGAP1-204ENST00000542381 TRIM67Q6ZTA4 783 aa13.28□□□□□ -0.28
SRGAP1-204ENST00000542381 ANKLE1Q8NAG6 615 aa13.27□□□□□ -0.29
SRGAP1-204ENST00000542381 GPR37O15354 613 aa13.26□□□□□ -0.29
SRGAP1-204ENST00000542381 NR1I2O75469 434 aa13.26□□□□□ -0.29
SRGAP1-204ENST00000542381 PUS10Q3MIT2 529 aaKnown RBP13.26□□□□□ -0.29
SRGAP1-204ENST00000542381 GNPATO15228 680 aa13.25□□□□□ -0.29
SRGAP1-204ENST00000542381 ADH1BP00325 375 aa13.25□□□□□ -0.29
SRGAP1-204ENST00000542381 SPRYD7Q5W111 196 aa13.25□□□□□ -0.29
SRGAP1-204ENST00000542381 SMYD5Q6GMV2 418 aa13.25□□□□□ -0.29
SRGAP1-204ENST00000542381 LIAT1Q6ZQX7 453 aa13.25□□□□□ -0.29
SRGAP1-204ENST00000542381 SCUBE3Q8IX30 993 aa13.25□□□□□ -0.29
SRGAP1-204ENST00000542381 NLRP7Q8WX94 980 aa13.24□□□□□ -0.29
SRGAP1-204ENST00000542381 ZNF598Q86UK7 904 aaKnown RBP13.21□□□□□ -0.29
SRGAP1-204ENST00000542381 SLC6A16Q9GZN6 736 aa13.21□□□□□ -0.29
SRGAP1-204ENST00000542381 RSPH4AQ5TD94 716 aa13.2□□□□□ -0.3
SRGAP1-204ENST00000542381 DAXXQ9UER7 740 aaPredicted RBP13.2□□□□□ -0.3
SRGAP1-204ENST00000542381 PLA2G2CQ5R387 149 aa13.19□□□□□ -0.3
SRGAP1-204ENST00000542381 RDH13Q8NBN7 331 aa13.18□□□□□ -0.3
SRGAP1-204ENST00000542381 ZNF697Q5TEC3 545 aa13.17□□□□□ -0.3
SRGAP1-204ENST00000542381 PHOX2BQ99453 314 aa13.17□□□□□ -0.3
SRGAP1-204ENST00000542381 DDX11L8A8MPP1 907 aa13.16□□□□□ -0.3
SRGAP1-204ENST00000542381 SPSB2Q99619 263 aa13.16□□□□□ -0.3
SRGAP1-204ENST00000542381 HAP1P54257 671 aaPredicted RBP13.14□□□□□ -0.31
SRGAP1-204ENST00000542381 FUT2Q10981 343 aa13.14□□□□□ -0.31
SRGAP1-204ENST00000542381 ZNF787Q6DD87 383 aa13.14□□□□□ -0.31
SRGAP1-204ENST00000542381 PRR20EP86478 221 aa13.13□□□□□ -0.31
SRGAP1-204ENST00000542381 PRR20CP86479 221 aa13.13□□□□□ -0.31
SRGAP1-204ENST00000542381 PRR20DP86480 221 aa13.13□□□□□ -0.31
SRGAP1-204ENST00000542381 PRR20BP86481 221 aa13.13□□□□□ -0.31
SRGAP1-204ENST00000542381 PRR20AP86496 221 aa13.13□□□□□ -0.31
SRGAP1-204ENST00000542381 MORN1Q5T089 497 aa13.13□□□□□ -0.31
SRGAP1-204ENST00000542381 KDM2AQ9Y2K7 1162 aa13.13□□□□□ -0.31
SRGAP1-204ENST00000542381 TNFRSF10AO00220 468 aa13.12□□□□□ -0.31
SRGAP1-204ENST00000542381 GDF9O60383 454 aa13.12□□□□□ -0.31
SRGAP1-204ENST00000542381 PKDCCQ504Y2 493 aa13.11□□□□□ -0.31
SRGAP1-204ENST00000542381 MYT1Q01538 1121 aa13.1□□□□□ -0.31
SRGAP1-204ENST00000542381 GPIHBP1Q8IV16 184 aa13.1□□□□□ -0.31
SRGAP1-204ENST00000542381 THAP11Q96EK4 314 aa13.1□□□□□ -0.31
SRGAP1-204ENST00000542381 ATP6V1AP38606 617 aa13.09□□□□□ -0.31
SRGAP1-204ENST00000542381 GCGRP47871 477 aa13.09□□□□□ -0.31
SRGAP1-204ENST00000542381 SLC27A5Q9Y2P5 690 aa13.09□□□□□ -0.31
SRGAP1-204ENST00000542381 DGAT1O75907 488 aa13.08□□□□□ -0.32
SRGAP1-204ENST00000542381 FAM160A2Q8N612 972 aaPredicted RBP13.06□□□□□ -0.32
SRGAP1-204ENST00000542381 FAM187AA6NFU0 413 aa13.05□□□□□ -0.32
SRGAP1-204ENST00000542381 SULF1Q8IWU6 871 aa13.05□□□□□ -0.32
SRGAP1-204ENST00000542381 PKD2L1Q9P0L9 805 aa13.04□□□□□ -0.32
SRGAP1-204ENST00000542381 FCF1Q9Y324 198 aaKnown RBP13.04□□□□□ -0.32
SRGAP1-204ENST00000542381 FMNL1O95466 1100 aaPredicted RBP13.03□□□□□ -0.32
SRGAP1-204ENST00000542381 FOXC1Q12948 553 aa13.03□□□□□ -0.32
SRGAP1-204ENST00000542381 PRDM9Q9NQV7 894 aa13.03□□□□□ -0.32
SRGAP1-204ENST00000542381 POTECB2RU33 542 aa13.01□□□□□ -0.33
SRGAP1-204ENST00000542381 BRICD5Q6PL45 260 aa13.01□□□□□ -0.33
SRGAP1-204ENST00000542381 RNF19BQ6ZMZ0 732 aa13□□□□□ -0.33
SRGAP1-204ENST00000542381 ZNF775Q96BV0 537 aaPredicted RBP13□□□□□ -0.33
SRGAP1-204ENST00000542381 RPIAP49247 311 aa12.99□□□□□ -0.33
SRGAP1-204ENST00000542381 SALL2Q9Y467 1007 aaPredicted RBP12.99□□□□□ -0.33
SRGAP1-204ENST00000542381 ST8SIA5O15466 376 aa12.96□□□□□ -0.33
SRGAP1-204ENST00000542381 CD2BP2O95400 341 aaKnown RBP12.95□□□□□ -0.34
SRGAP1-204ENST00000542381 MAP2K5Q13163 448 aa12.95□□□□□ -0.34
SRGAP1-204ENST00000542381 CD46P15529 392 aa12.94□□□□□ -0.34
SRGAP1-204ENST00000542381 AAASQ9NRG9 546 aa12.94□□□□□ -0.34
SRGAP1-204ENST00000542381 GRIPAP1Q4V328 841 aa12.93□□□□□ -0.34
SRGAP1-204ENST00000542381 MSS51Q4VC12 460 aa12.93□□□□□ -0.34
SRGAP1-204ENST00000542381 LMOD2Q6P5Q4 547 aa12.93□□□□□ -0.34
SRGAP1-204ENST00000542381 IRF6O14896 467 aa12.92□□□□□ -0.34
SRGAP1-204ENST00000542381 TOR4AQ9NXH8 423 aa12.91□□□□□ -0.34
SRGAP1-204ENST00000542381 MDM2Q00987 491 aaPredicted RBP12.9□□□□□ -0.34
SRGAP1-204ENST00000542381 HLA-CQ95604 372 aa12.89□□□□□ -0.35
SRGAP1-204ENST00000542381 KDM4AO75164 1064 aa12.88□□□□□ -0.35
SRGAP1-204ENST00000542381 CYP4X1Q8N118 509 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms