RNA–Protein interactions for RNA: ENST00000542179.1

LDHA-220, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 1,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-220ENST00000542179 C19orf67A6NJJ6 358 aa13.29□□□□□ -0.28
LDHA-220ENST00000542179 CCDC144AA2RUR9 1427 aa13.29□□□□□ -0.28
LDHA-220ENST00000542179 FARP1Q9Y4F1 1045 aaPredicted RBP13.28□□□□□ -0.28
LDHA-220ENST00000542179 WASHC2CQ9Y4E1 1318 aa13.28□□□□□ -0.28
LDHA-220ENST00000542179 TRPM2O94759 1503 aa13.28□□□□□ -0.28
LDHA-220ENST00000542179 CEP152O94986 1710 aa13.27□□□□□ -0.28
LDHA-220ENST00000542179 FBXO41Q8TF61 875 aa13.27□□□□□ -0.29
LDHA-220ENST00000542179 L3MBTL2Q969R5 705 aa13.27□□□□□ -0.29
LDHA-220ENST00000542179 ARHGAP31Q2M1Z3 1444 aa13.27□□□□□ -0.29
LDHA-220ENST00000542179 SPHKAPQ2M3C7 1700 aa13.26□□□□□ -0.29
LDHA-220ENST00000542179 ILDR2Q71H61 639 aa13.26□□□□□ -0.29
LDHA-220ENST00000542179 PROM2Q8N271 834 aa13.26□□□□□ -0.29
LDHA-220ENST00000542179 SIGLEC1Q9BZZ2 1709 aa13.26□□□□□ -0.29
LDHA-220ENST00000542179 CAMSAP1Q5T5Y3 1602 aa13.25□□□□□ -0.29
LDHA-220ENST00000542179 EVX2Q03828 476 aa13.25□□□□□ -0.29
LDHA-220ENST00000542179 NPATQ14207 1427 aa13.24□□□□□ -0.29
LDHA-220ENST00000542179 CREBZFQ9NS37 354 aa13.23□□□□□ -0.29
LDHA-220ENST00000542179 NEURL4Q96JN8 1562 aa13.23□□□□□ -0.29
LDHA-220ENST00000542179 NOS1P29475 1434 aa13.22□□□□□ -0.29
LDHA-220ENST00000542179 CNTLNQ9NXG0 1405 aa13.22□□□□□ -0.29
LDHA-220ENST00000542179 SPATA31E1Q6ZUB1 1445 aa13.21□□□□□ -0.3
LDHA-220ENST00000542179 UHRF1BP1Q6BDS2 1440 aa13.2□□□□□ -0.3
LDHA-220ENST00000542179 CLTCL1P53675 1640 aa13.2□□□□□ -0.3
LDHA-220ENST00000542179 ZNF316A6NFI3 1004 aaPredicted RBP13.18□□□□□ -0.3
LDHA-220ENST00000542179 STAC3Q96MF2 364 aa13.18□□□□□ -0.3
LDHA-220ENST00000542179 CLTCQ00610 1675 aaKnown RBP13.17□□□□□ -0.3
LDHA-220ENST00000542179 CD44P16070 742 aaKnown RBP13.16□□□□□ -0.3
LDHA-220ENST00000542179 FKBP8Q14318 412 aa13.16□□□□□ -0.3
LDHA-220ENST00000542179 NBPF8Q3BBV2 869 aa13.16□□□□□ -0.3
LDHA-220ENST00000542179 PIK3C2BO00750 1634 aa13.16□□□□□ -0.3
LDHA-220ENST00000542179 ARID4BQ4LE39 1312 aaPredicted RBP13.15□□□□□ -0.3
LDHA-220ENST00000542179 PREX1Q8TCU6 1659 aa13.15□□□□□ -0.3
LDHA-220ENST00000542179 DCAF11Q8TEB1 546 aa13.15□□□□□ -0.3
LDHA-220ENST00000542179 SLC52A1Q9NWF4 448 aa13.15□□□□□ -0.3
LDHA-220ENST00000542179 KIF1BO60333 1816 aa13.15□□□□□ -0.3
LDHA-220ENST00000542179 SYNMO15061 1565 aa13.15□□□□□ -0.3
LDHA-220ENST00000542179 MLECQ14165 292 aa13.14□□□□□ -0.31
LDHA-220ENST00000542179 ESF1Q9H501 851 aaKnown RBP13.14□□□□□ -0.31
LDHA-220ENST00000542179 UGGT1Q9NYU2 1555 aa13.14□□□□□ -0.31
LDHA-220ENST00000542179 MROH2AA6NES4 1674 aa13.13□□□□□ -0.31
LDHA-220ENST00000542179 SPATA31D1Q6ZQQ2 1576 aa13.13□□□□□ -0.31
LDHA-220ENST00000542179 ERVK-7P63135 1459 aa13.13□□□□□ -0.31
LDHA-220ENST00000542179 ZMYM3Q14202 1370 aa13.13□□□□□ -0.31
LDHA-220ENST00000542179 RGL3Q3MIN7 710 aa13.13□□□□□ -0.31
LDHA-220ENST00000542179 KDM4FA0A1W2PPD8 638 aa13.12□□□□□ -0.31
LDHA-220ENST00000542179 ADGRB3O60242 1522 aa13.12□□□□□ -0.31
LDHA-220ENST00000542179 PRAG1Q86YV5 1406 aa13.12□□□□□ -0.31
LDHA-220ENST00000542179 CFAP65Q6ZU64 1925 aaKnown RBP13.11□□□□□ -0.31
LDHA-220ENST00000542179 RPGRIP1LQ68CZ1 1315 aa13.11□□□□□ -0.31
LDHA-220ENST00000542179 RALGAPBQ86X10 1494 aa13.1□□□□□ -0.31
LDHA-220ENST00000542179 KDM2AQ9Y2K7 1162 aa13.1□□□□□ -0.31
LDHA-220ENST00000542179 IDI1Q13907 227 aa13.09□□□□□ -0.31
LDHA-220ENST00000542179 FBXO31Q5XUX0 539 aaPredicted RBP13.09□□□□□ -0.31
LDHA-220ENST00000542179 MYOM2P54296 1465 aa13.09□□□□□ -0.31
LDHA-220ENST00000542179 IFT172Q9UG01 1749 aa13.08□□□□□ -0.32
LDHA-220ENST00000542179 TRPM1Q7Z4N2 1603 aa13.07□□□□□ -0.32
LDHA-220ENST00000542179 TMEM131LA2VDJ0 1609 aa13.06□□□□□ -0.32
LDHA-220ENST00000542179 MADDQ8WXG6 1647 aa13.06□□□□□ -0.32
LDHA-220ENST00000542179 NRXN1Q9ULB1 1477 aa13.06□□□□□ -0.32
LDHA-220ENST00000542179 PLEKHG5O94827 1062 aa13.06□□□□□ -0.32
LDHA-220ENST00000542179 EIF4G2P78344 907 aaKnown RBP eCLIP13.06□□□□□ -0.32
LDHA-220ENST00000542179 ZNF326Q5BKZ1 582 aaKnown RBP13.06□□□□□ -0.32
LDHA-220ENST00000542179 FER1L4A9Z1Z3 1794 aa13.06□□□□□ -0.32
LDHA-220ENST00000542179 GPRASP1Q5JY77 1395 aa13.06□□□□□ -0.32
LDHA-220ENST00000542179 PPLO60437 1756 aa13.04□□□□□ -0.32
LDHA-220ENST00000542179 LAMC1P11047 1609 aa13.04□□□□□ -0.32
LDHA-220ENST00000542179 GABBR2O75899 941 aa13.04□□□□□ -0.32
LDHA-220ENST00000542179 KIAA1210Q9ULL0 1709 aa13.04□□□□□ -0.32
LDHA-220ENST00000542179 ZFYVE9O95405 1425 aa13.04□□□□□ -0.32
LDHA-220ENST00000542179 C3P01024 1663 aa13.03□□□□□ -0.32
LDHA-220ENST00000542179 PAK3O75914 559 aaPredicted RBP13.03□□□□□ -0.32
LDHA-220ENST00000542179 CHGAP10645 457 aaKnown RBP13.03□□□□□ -0.32
LDHA-220ENST00000542179 CLCN6P51797 869 aa13.03□□□□□ -0.32
LDHA-220ENST00000542179 TNRQ92752 1358 aa13.03□□□□□ -0.32
LDHA-220ENST00000542179 NEXMIFQ5QGS0 1516 aa13.03□□□□□ -0.32
LDHA-220ENST00000542179 KDM5AP29375 1690 aaKnown RBP13.02□□□□□ -0.32
LDHA-220ENST00000542179 ADAMTSL3P82987 1691 aa13.02□□□□□ -0.32
LDHA-220ENST00000542179 HSPA5P11021 654 aaKnown RBP13.02□□□□□ -0.33
LDHA-220ENST00000542179 ROCK2O75116 1388 aaKnown RBP13.02□□□□□ -0.33
LDHA-220ENST00000542179 VGFO15240 615 aaPredicted RBP13.01□□□□□ -0.33
LDHA-220ENST00000542179 MIER1Q8N108 512 aa13.01□□□□□ -0.33
LDHA-220ENST00000542179 CARD11Q9BXL7 1154 aa13.01□□□□□ -0.33
LDHA-220ENST00000542179 ZRANB1Q9UGI0 708 aa13.01□□□□□ -0.33
LDHA-220ENST00000542179 A2ML1A8K2U0 1454 aa13□□□□□ -0.33
LDHA-220ENST00000542179 NLRP1Q9C000 1473 aa13□□□□□ -0.33
LDHA-220ENST00000542179 USP47Q96K76 1375 aa13□□□□□ -0.33
LDHA-220ENST00000542179 ADGRF5Q8IZF2 1346 aa13□□□□□ -0.33
LDHA-220ENST00000542179 PIK3C2GO75747 1445 aa12.99□□□□□ -0.33
LDHA-220ENST00000542179 DISP3Q9P2K9 1392 aa12.99□□□□□ -0.33
LDHA-220ENST00000542179 MNX1P50219 401 aaPredicted RBP12.99□□□□□ -0.33
LDHA-220ENST00000542179 NBPF1Q3BBV0 1214 aa12.99□□□□□ -0.33
LDHA-220ENST00000542179 MYO5BQ9ULV0 1848 aa12.99□□□□□ -0.33
LDHA-220ENST00000542179 DIEXFQ68CQ4 756 aaKnown RBP12.98□□□□□ -0.33
LDHA-220ENST00000542179 C14orf93Q9H972 538 aaKnown RBP12.98□□□□□ -0.33
LDHA-220ENST00000542179 CEBPAP49715 358 aaPredicted RBP12.97□□□□□ -0.33
LDHA-220ENST00000542179 HIRIP3Q9BW71 556 aaPredicted RBP12.97□□□□□ -0.33
LDHA-220ENST00000542179 SETBP1Q9Y6X0 1596 aa12.97□□□□□ -0.33
LDHA-220ENST00000542179 RIMS1Q86UR5 1692 aaKnown RBP12.96□□□□□ -0.33
LDHA-220ENST00000542179 UBR1Q8IWV7 1749 aa12.96□□□□□ -0.34
LDHA-220ENST00000542179 HDGFP51858 240 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms