RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 FAM217BQ9NTX9 383 aaPredicted RBP6.03□□□□□ -1.44
SNHG1-219ENST00000542112 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.02□□□□□ -1.45
SNHG1-219ENST00000542112 FLIIQ13045 1269 aa6.02□□□□□ -1.45
SNHG1-219ENST00000542112 FAM161AQ3B820 660 aa6.02□□□□□ -1.45
SNHG1-219ENST00000542112 C11orf95C9JLR9 678 aaPredicted RBP6.01□□□□□ -1.45
SNHG1-219ENST00000542112 KCNH8Q96L42 1107 aa6.01□□□□□ -1.45
SNHG1-219ENST00000542112 BEGAINQ9BUH8 593 aa6.01□□□□□ -1.45
SNHG1-219ENST00000542112 RBM19Q9Y4C8 960 aaKnown RBP6.01□□□□□ -1.45
SNHG1-219ENST00000542112 ONECUT3O60422 494 aaPredicted RBP6□□□□□ -1.45
SNHG1-219ENST00000542112 COL9A1P20849 921 aa6□□□□□ -1.45
SNHG1-219ENST00000542112 SKIV2LQ15477 1246 aaKnown RBP6□□□□□ -1.45
SNHG1-219ENST00000542112 DIXDC1Q155Q3 683 aa6□□□□□ -1.45
SNHG1-219ENST00000542112 CDK11AQ9UQ88 783 aaPredicted RBP6□□□□□ -1.45
SNHG1-219ENST00000542112 BICRAQ9NZM4 1560 aa6□□□□□ -1.45
SNHG1-219ENST00000542112 NBPF26B4DH59 902 aa5.99□□□□□ -1.45
SNHG1-219ENST00000542112 PACS2Q86VP3 889 aa5.99□□□□□ -1.45
SNHG1-219ENST00000542112 EYA1Q99502 592 aa5.99□□□□□ -1.45
SNHG1-219ENST00000542112 ZMYND15Q9H091 742 aa5.99□□□□□ -1.45
SNHG1-219ENST00000542112 TRIM6-TRIM34B2RNG4 842 aa5.98□□□□□ -1.45
SNHG1-219ENST00000542112 SULF1Q8IWU6 871 aa5.98□□□□□ -1.45
SNHG1-219ENST00000542112 NLRP7Q8WX94 980 aa5.98□□□□□ -1.45
SNHG1-219ENST00000542112 TSKSQ9UJT2 592 aa5.98□□□□□ -1.45
SNHG1-219ENST00000542112 RCCD1A6NED2 376 aa5.97□□□□□ -1.45
SNHG1-219ENST00000542112 DNAJB2P25686 324 aa5.97□□□□□ -1.45
SNHG1-219ENST00000542112 AAMPQ13685 434 aa5.97□□□□□ -1.45
SNHG1-219ENST00000542112 FAM198AQ9UFP1 575 aa5.97□□□□□ -1.45
SNHG1-219ENST00000542112 NUDT18Q6ZVK8 323 aa5.96□□□□□ -1.46
SNHG1-219ENST00000542112 TATDN2Q93075 761 aa5.96□□□□□ -1.46
SNHG1-219ENST00000542112 BRD2P25440 801 aaKnown RBP5.95□□□□□ -1.46
SNHG1-219ENST00000542112 MYSM1Q5VVJ2 828 aa5.95□□□□□ -1.46
SNHG1-219ENST00000542112 KCNK17Q96T54 332 aa5.95□□□□□ -1.46
SNHG1-219ENST00000542112 USP35Q9P2H5 1018 aa5.95□□□□□ -1.46
SNHG1-219ENST00000542112 PNMA3Q9UL41 463 aa5.95□□□□□ -1.46
SNHG1-219ENST00000542112 ATP1B4Q9UN42 357 aaPredicted RBP5.95□□□□□ -1.46
SNHG1-219ENST00000542112 SUPT5HO00267 1087 aaKnown RBP5.94□□□□□ -1.46
SNHG1-219ENST00000542112 CD46P15529 392 aa5.94□□□□□ -1.46
SNHG1-219ENST00000542112 CLK2P49760 499 aaKnown RBP5.94□□□□□ -1.46
SNHG1-219ENST00000542112 RSPH4AQ5TD94 716 aa5.94□□□□□ -1.46
SNHG1-219ENST00000542112 OTUD5Q96G74 571 aa5.94□□□□□ -1.46
SNHG1-219ENST00000542112 TBC1D2Q9BYX2 928 aa5.94□□□□□ -1.46
SNHG1-219ENST00000542112 TMEM134Q9H6X4 195 aa5.94□□□□□ -1.46
SNHG1-219ENST00000542112 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.93□□□□□ -1.46
SNHG1-219ENST00000542112 SLC4A5Q9BY07 1137 aa5.93□□□□□ -1.46
SNHG1-219ENST00000542112 POLR3EQ9NVU0 708 aa5.93□□□□□ -1.46
SNHG1-219ENST00000542112 ARHGAP33O14559 1287 aa5.92□□□□□ -1.46
SNHG1-219ENST00000542112 RRP9O43818 475 aaKnown RBP5.92□□□□□ -1.46
SNHG1-219ENST00000542112 TUSC1Q2TAM9 212 aa5.92□□□□□ -1.46
SNHG1-219ENST00000542112 PROX2Q3B8N5 592 aa5.92□□□□□ -1.46
SNHG1-219ENST00000542112 RTL5Q5HYW3 569 aaPredicted RBP5.92□□□□□ -1.46
SNHG1-219ENST00000542112 NUTM1Q86Y26 1132 aa5.92□□□□□ -1.46
SNHG1-219ENST00000542112 PROCA1Q8NCQ7 364 aaPredicted RBP5.92□□□□□ -1.46
SNHG1-219ENST00000542112 SPIRE2Q8WWL2 714 aa5.92□□□□□ -1.46
SNHG1-219ENST00000542112 CCDC136Q96JN2 1154 aa5.92□□□□□ -1.46
SNHG1-219ENST00000542112 ZBED2Q9BTP6 218 aa5.92□□□□□ -1.46
SNHG1-219ENST00000542112 ERBB3P21860 1342 aa5.92□□□□□ -1.46
SNHG1-219ENST00000542112 DDX11L8A8MPP1 907 aa5.91□□□□□ -1.46
SNHG1-219ENST00000542112 C3orf80F5H4A9 247 aa5.91□□□□□ -1.46
SNHG1-219ENST00000542112 NCLP19338 710 aaKnown RBP5.91□□□□□ -1.46
SNHG1-219ENST00000542112 GJA5P36382 358 aa5.91□□□□□ -1.46
SNHG1-219ENST00000542112 PBX2P40425 430 aa5.91□□□□□ -1.46
SNHG1-219ENST00000542112 KIAA1468Q9P260 1216 aa5.91□□□□□ -1.46
SNHG1-219ENST00000542112 RABGEF1Q9UJ41 708 aa5.91□□□□□ -1.46
SNHG1-219ENST00000542112 A6NJR5 290 aa5.9□□□□□ -1.46
SNHG1-219ENST00000542112 SLC4A3P48751 1232 aa5.9□□□□□ -1.46
SNHG1-219ENST00000542112 RBM10P98175 930 aaKnown RBP5.9□□□□□ -1.46
SNHG1-219ENST00000542112 MCM6Q14566 821 aa5.9□□□□□ -1.46
SNHG1-219ENST00000542112 RIC3Q7Z5B4 369 aa5.9□□□□□ -1.46
SNHG1-219ENST00000542112 BCCIPQ9P287 314 aaKnown RBP eCLIP5.9□□□□□ -1.46
SNHG1-219ENST00000542112 SMAPO00193 183 aa5.89□□□□□ -1.47
SNHG1-219ENST00000542112 SPTLC1O15269 473 aa5.89□□□□□ -1.47
SNHG1-219ENST00000542112 UBTFP17480 764 aaKnown RBP5.89□□□□□ -1.47
SNHG1-219ENST00000542112 USP46P62068 366 aa5.89□□□□□ -1.47
SNHG1-219ENST00000542112 VARS2Q5ST30 1063 aaKnown RBP5.89□□□□□ -1.47
SNHG1-219ENST00000542112 PPP2R2DQ66LE6 453 aa5.89□□□□□ -1.47
SNHG1-219ENST00000542112 LHX8Q68G74 356 aa5.89□□□□□ -1.47
SNHG1-219ENST00000542112 NPM2Q86SE8 214 aaKnown RBP5.89□□□□□ -1.47
SNHG1-219ENST00000542112 RDH13Q8NBN7 331 aa5.89□□□□□ -1.47
SNHG1-219ENST00000542112 BANK1Q8NDB2 785 aa5.89□□□□□ -1.47
SNHG1-219ENST00000542112 CECR2Q9BXF3 1484 aa5.89□□□□□ -1.47
SNHG1-219ENST00000542112 RFC5P40937 340 aa5.88□□□□□ -1.47
SNHG1-219ENST00000542112 PSEN2P49810 448 aa5.88□□□□□ -1.47
SNHG1-219ENST00000542112 HDGFP51858 240 aaKnown RBP5.88□□□□□ -1.47
SNHG1-219ENST00000542112 TMEM259Q4ZIN3 620 aa5.88□□□□□ -1.47
SNHG1-219ENST00000542112 RSBN1LQ6PCB5 846 aaPredicted RBP5.88□□□□□ -1.47
SNHG1-219ENST00000542112 LIMD1Q9UGP4 676 aa5.88□□□□□ -1.47
SNHG1-219ENST00000542112 SPDYE5A6NIY4 337 aa5.87□□□□□ -1.47
SNHG1-219ENST00000542112 KDM4AO75164 1064 aa5.87□□□□□ -1.47
SNHG1-219ENST00000542112 HSP90B1P14625 803 aaKnown RBP5.87□□□□□ -1.47
SNHG1-219ENST00000542112 EMP3P54852 163 aa5.87□□□□□ -1.47
SNHG1-219ENST00000542112 ARID3AQ99856 593 aa5.87□□□□□ -1.47
SNHG1-219ENST00000542112 CENPJQ9HC77 1338 aaPredicted RBP5.87□□□□□ -1.47
SNHG1-219ENST00000542112 WASHC2CQ9Y4E1 1318 aa5.87□□□□□ -1.47
SNHG1-219ENST00000542112 MROH2BQ7Z745 1585 aa5.87□□□□□ -1.47
SNHG1-219ENST00000542112 SMARCA4P51532 1647 aa5.86□□□□□ -1.47
SNHG1-219ENST00000542112 RSF1Q96T23 1441 aaPredicted RBP5.86□□□□□ -1.47
SNHG1-219ENST00000542112 MOXD2PA6NHM9 499 aa5.86□□□□□ -1.47
SNHG1-219ENST00000542112 RAD21O60216 631 aa5.86□□□□□ -1.47
SNHG1-219ENST00000542112 ST18O60284 1047 aa5.86□□□□□ -1.47
SNHG1-219ENST00000542112 GCGRP47871 477 aa5.86□□□□□ -1.47
SNHG1-219ENST00000542112 FAM98CQ17RN3 349 aaKnown RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms