RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 HECW2Q9P2P5 1572 aa12.23□□□□□ -0.45
THBS3-211ENST00000541990 PPRC1Q5VV67 1664 aaKnown RBP12.22□□□□□ -0.45
THBS3-211ENST00000541990 KDM5CP41229 1560 aa12.22□□□□□ -0.45
THBS3-211ENST00000541990 PRDM15P57071 1507 aaPredicted RBP12.22□□□□□ -0.45
THBS3-211ENST00000541990 ROCK2O75116 1388 aaKnown RBP12.22□□□□□ -0.45
THBS3-211ENST00000541990 USP47Q96K76 1375 aa12.21□□□□□ -0.45
THBS3-211ENST00000541990 MROH1Q8NDA8 1641 aa12.21□□□□□ -0.45
THBS3-211ENST00000541990 SKAP1Q86WV1 359 aa12.21□□□□□ -0.45
THBS3-211ENST00000541990 E9PCH4 1651 aa12.21□□□□□ -0.46
THBS3-211ENST00000541990 DIP2CQ9Y2E4 1556 aa12.21□□□□□ -0.46
THBS3-211ENST00000541990 SAFB2Q14151 953 aaKnown RBP eCLIP12.2□□□□□ -0.46
THBS3-211ENST00000541990 IQGAP3Q86VI3 1631 aa12.2□□□□□ -0.46
THBS3-211ENST00000541990 GLI2P10070 1586 aa12.2□□□□□ -0.46
THBS3-211ENST00000541990 MAGI2Q86UL8 1455 aa12.19□□□□□ -0.46
THBS3-211ENST00000541990 RICTORQ6R327 1708 aa12.19□□□□□ -0.46
THBS3-211ENST00000541990 EXOC6Q8TAG9 804 aa12.19□□□□□ -0.46
THBS3-211ENST00000541990 NEFMP07197 916 aa12.18□□□□□ -0.46
THBS3-211ENST00000541990 CEP152O94986 1710 aa12.18□□□□□ -0.46
THBS3-211ENST00000541990 STAG3Q9UJ98 1225 aa12.18□□□□□ -0.46
THBS3-211ENST00000541990 ESF1Q9H501 851 aaKnown RBP12.17□□□□□ -0.46
THBS3-211ENST00000541990 SIGLEC1Q9BZZ2 1709 aa12.17□□□□□ -0.46
THBS3-211ENST00000541990 STK26Q9P289 416 aa12.17□□□□□ -0.46
THBS3-211ENST00000541990 PNISRQ8TF01 805 aaKnown RBP12.16□□□□□ -0.46
THBS3-211ENST00000541990 TRAK1Q9UPV9 953 aa12.16□□□□□ -0.46
THBS3-211ENST00000541990 BCORL1Q5H9F3 1711 aa12.15□□□□□ -0.46
THBS3-211ENST00000541990 PRAG1Q86YV5 1406 aa12.15□□□□□ -0.46
THBS3-211ENST00000541990 CLTCL1P53675 1640 aa12.15□□□□□ -0.46
THBS3-211ENST00000541990 CFAP74Q9C0B2 1584 aa12.15□□□□□ -0.46
THBS3-211ENST00000541990 PDE4AP27815 886 aa12.15□□□□□ -0.46
THBS3-211ENST00000541990 ABCC3O15438 1527 aa12.14□□□□□ -0.47
THBS3-211ENST00000541990 PTPRTO14522 1441 aa12.13□□□□□ -0.47
THBS3-211ENST00000541990 NOS1P29475 1434 aa12.13□□□□□ -0.47
THBS3-211ENST00000541990 RRP1P56182 461 aaKnown RBP12.13□□□□□ -0.47
THBS3-211ENST00000541990 BRPF3Q9ULD4 1205 aa12.13□□□□□ -0.47
THBS3-211ENST00000541990 VWDEQ8N2E2 1590 aa12.12□□□□□ -0.47
THBS3-211ENST00000541990 DEPDC5O75140 1603 aa12.11□□□□□ -0.47
THBS3-211ENST00000541990 TMC1Q8TDI8 760 aa12.11□□□□□ -0.47
THBS3-211ENST00000541990 EFCAB6Q5THR3 1501 aa12.11□□□□□ -0.47
THBS3-211ENST00000541990 BACH2Q9BYV9 841 aa12.1□□□□□ -0.47
THBS3-211ENST00000541990 POLR1AO95602 1720 aaPredicted RBP12.1□□□□□ -0.47
THBS3-211ENST00000541990 SLC4A3P48751 1232 aa12.1□□□□□ -0.47
THBS3-211ENST00000541990 TET3O43151 1660 aa12.09□□□□□ -0.47
THBS3-211ENST00000541990 TRPM2O94759 1503 aa12.09□□□□□ -0.47
THBS3-211ENST00000541990 PLIN1O60240 522 aa12.09□□□□□ -0.47
THBS3-211ENST00000541990 ZMYM3Q14202 1370 aa12.09□□□□□ -0.47
THBS3-211ENST00000541990 DISP3Q9P2K9 1392 aa12.09□□□□□ -0.47
THBS3-211ENST00000541990 TESK2Q96S53 571 aa12.08□□□□□ -0.48
THBS3-211ENST00000541990 UHRF1BP1Q6BDS2 1440 aa12.08□□□□□ -0.48
THBS3-211ENST00000541990 TCERG1O14776 1098 aaKnown RBP12.08□□□□□ -0.48
THBS3-211ENST00000541990 CDCA7LQ96GN5 454 aa12.07□□□□□ -0.48
THBS3-211ENST00000541990 SPHKAPQ2M3C7 1700 aa12.07□□□□□ -0.48
THBS3-211ENST00000541990 RCAN3Q9UKA8 241 aa12.07□□□□□ -0.48
THBS3-211ENST00000541990 RNF17Q9BXT8 1623 aaKnown RBP12.07□□□□□ -0.48
THBS3-211ENST00000541990 RALGAPBQ86X10 1494 aa12.07□□□□□ -0.48
THBS3-211ENST00000541990 AEBP2Q6ZN18 517 aaPredicted RBP12.07□□□□□ -0.48
THBS3-211ENST00000541990 LRPPRCP42704 1394 aaKnown RBP12.06□□□□□ -0.48
THBS3-211ENST00000541990 CC2D1BQ5T0F9 858 aaKnown RBP12.06□□□□□ -0.48
THBS3-211ENST00000541990 EIF2AK4Q9P2K8 1649 aaKnown RBP12.05□□□□□ -0.48
THBS3-211ENST00000541990 MROH2AA6NES4 1674 aa12.04□□□□□ -0.48
THBS3-211ENST00000541990 SYNMO15061 1565 aa12.04□□□□□ -0.48
THBS3-211ENST00000541990 ZMYM4Q5VZL5 1548 aa12.04□□□□□ -0.48
THBS3-211ENST00000541990 USP35Q9P2H5 1018 aa12.03□□□□□ -0.48
THBS3-211ENST00000541990 CAMSAP1Q5T5Y3 1602 aa12.03□□□□□ -0.48
THBS3-211ENST00000541990 RBM33Q96EV2 1170 aaKnown RBP12.03□□□□□ -0.48
THBS3-211ENST00000541990 PANK3Q9H999 370 aa12.03□□□□□ -0.48
THBS3-211ENST00000541990 WAPLQ7Z5K2 1190 aa12.02□□□□□ -0.48
THBS3-211ENST00000541990 CLTCQ00610 1675 aaKnown RBP12.02□□□□□ -0.49
THBS3-211ENST00000541990 NFKBIBQ15653 356 aa12.02□□□□□ -0.49
THBS3-211ENST00000541990 SLC26A8Q96RN1 970 aa12.02□□□□□ -0.49
THBS3-211ENST00000541990 CRBNQ96SW2 442 aa12.02□□□□□ -0.49
THBS3-211ENST00000541990 SLC52A1Q9NWF4 448 aa12.02□□□□□ -0.49
THBS3-211ENST00000541990 LMTK2Q8IWU2 1503 aa12.02□□□□□ -0.49
THBS3-211ENST00000541990 NUTM2FA1L443 756 aa12.01□□□□□ -0.49
THBS3-211ENST00000541990 FRAT1Q92837 279 aaPredicted RBP12.01□□□□□ -0.49
THBS3-211ENST00000541990 PPM1GO15355 546 aaPredicted RBP12.01□□□□□ -0.49
THBS3-211ENST00000541990 VGFO15240 615 aaPredicted RBP12□□□□□ -0.49
THBS3-211ENST00000541990 MINK1Q8N4C8 1332 aaPredicted RBP12□□□□□ -0.49
THBS3-211ENST00000541990 MYBBP1AQ9BQG0 1328 aaKnown RBP12□□□□□ -0.49
THBS3-211ENST00000541990 GSE1Q14687 1217 aa12□□□□□ -0.49
THBS3-211ENST00000541990 C20orf194Q5TEA3 1177 aa12□□□□□ -0.49
THBS3-211ENST00000541990 C14orf93Q9H972 538 aaKnown RBP12□□□□□ -0.49
THBS3-211ENST00000541990 MS4A1P11836 297 aa12□□□□□ -0.49
THBS3-211ENST00000541990 TRPM1Q7Z4N2 1603 aa11.99□□□□□ -0.49
THBS3-211ENST00000541990 ERVK-7P63135 1459 aa11.99□□□□□ -0.49
THBS3-211ENST00000541990 LTKP29376 864 aa11.99□□□□□ -0.49
THBS3-211ENST00000541990 CABP2Q9NPB3 220 aa11.99□□□□□ -0.49
THBS3-211ENST00000541990 ARHGEF40Q8TER5 1519 aa11.99□□□□□ -0.49
THBS3-211ENST00000541990 TMF1P82094 1093 aa11.99□□□□□ -0.49
THBS3-211ENST00000541990 BRD4O60885 1362 aaPredicted RBP11.98□□□□□ -0.49
THBS3-211ENST00000541990 TNNT2P45379 298 aaPredicted RBP11.98□□□□□ -0.49
THBS3-211ENST00000541990 TXNDC2Q86VQ3 553 aa11.98□□□□□ -0.49
THBS3-211ENST00000541990 SLC12A5Q9H2X9 1139 aa11.98□□□□□ -0.49
THBS3-211ENST00000541990 PRAM1Q96QH2 718 aa11.97□□□□□ -0.49
THBS3-211ENST00000541990 MADDQ8WXG6 1647 aa11.97□□□□□ -0.49
THBS3-211ENST00000541990 GPRASP1Q5JY77 1395 aa11.97□□□□□ -0.49
THBS3-211ENST00000541990 NCKAP5LQ9HCH0 1330 aa11.97□□□□□ -0.49
THBS3-211ENST00000541990 KDM4FA0A1W2PPD8 638 aa11.96□□□□□ -0.49
THBS3-211ENST00000541990 ADGRB3O60242 1522 aa11.96□□□□□ -0.49
THBS3-211ENST00000541990 EIF5BO60841 1220 aaKnown RBP11.96□□□□□ -0.5
THBS3-211ENST00000541990 MYO5BQ9ULV0 1848 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms