RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 SYCP2Q9BX26 1530 aa9.88□□□□□ -0.83
CLTCL1-206ENST00000540896 MYT1LQ9UL68 1186 aa9.88□□□□□ -0.83
CLTCL1-206ENST00000540896 TRAPPC8Q9Y2L5 1435 aa9.88□□□□□ -0.83
CLTCL1-206ENST00000540896 RICTORQ6R327 1708 aa9.87□□□□□ -0.83
CLTCL1-206ENST00000540896 ZNF518AQ6AHZ1 1483 aa9.87□□□□□ -0.83
CLTCL1-206ENST00000540896 MBD5Q9P267 1494 aa9.87□□□□□ -0.83
CLTCL1-206ENST00000540896 SOX12O15370 315 aa9.87□□□□□ -0.83
CLTCL1-206ENST00000540896 RRP7BPQ9NSQ0 103 aa9.87□□□□□ -0.83
CLTCL1-206ENST00000540896 DAPK1P53355 1430 aa9.86□□□□□ -0.83
CLTCL1-206ENST00000540896 FRMPD1Q5SYB0 1578 aa9.86□□□□□ -0.83
CLTCL1-206ENST00000540896 CDAN1Q8IWY9 1227 aa9.86□□□□□ -0.83
CLTCL1-206ENST00000540896 SPAG9O60271 1321 aaKnown RBP9.85□□□□□ -0.83
CLTCL1-206ENST00000540896 ABCC5O15440 1437 aa9.85□□□□□ -0.83
CLTCL1-206ENST00000540896 PTPRKQ15262 1439 aa9.85□□□□□ -0.83
CLTCL1-206ENST00000540896 DPY19L2Q6NUT2 758 aa9.85□□□□□ -0.83
CLTCL1-206ENST00000540896 EFCAB3Q8N7B9 438 aa9.85□□□□□ -0.83
CLTCL1-206ENST00000540896 KDM5CP41229 1560 aa9.84□□□□□ -0.83
CLTCL1-206ENST00000540896 ARHGEF5Q12774 1597 aa9.84□□□□□ -0.83
CLTCL1-206ENST00000540896 SETD5Q9C0A6 1442 aa9.83□□□□□ -0.84
CLTCL1-206ENST00000540896 ZMYM4Q5VZL5 1548 aa9.83□□□□□ -0.84
CLTCL1-206ENST00000540896 ANKRD30AQ9BXX3 1397 aa9.83□□□□□ -0.84
CLTCL1-206ENST00000540896 CCDC141Q6ZP82 1450 aa9.83□□□□□ -0.84
CLTCL1-206ENST00000540896 MAGI2Q86UL8 1455 aa9.83□□□□□ -0.84
CLTCL1-206ENST00000540896 CCER1Q8TC90 406 aaPredicted RBP9.82□□□□□ -0.84
CLTCL1-206ENST00000540896 MLH3Q9UHC1 1453 aa9.82□□□□□ -0.84
CLTCL1-206ENST00000540896 DNMT1P26358 1616 aaKnown RBP9.82□□□□□ -0.84
CLTCL1-206ENST00000540896 ZFYVE16Q7Z3T8 1539 aa9.82□□□□□ -0.84
CLTCL1-206ENST00000540896 C9orf84Q5VXU9 1444 aa9.82□□□□□ -0.84
CLTCL1-206ENST00000540896 YEATS2Q9ULM3 1422 aa9.82□□□□□ -0.84
CLTCL1-206ENST00000540896 HECW2Q9P2P5 1572 aa9.81□□□□□ -0.84
CLTCL1-206ENST00000540896 ROCK1Q13464 1354 aa9.81□□□□□ -0.84
CLTCL1-206ENST00000540896 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.81□□□□□ -0.84
CLTCL1-206ENST00000540896 ZFP91Q96JP5 570 aaPredicted RBP9.81□□□□□ -0.84
CLTCL1-206ENST00000540896 RAB3GAP2Q9H2M9 1393 aa9.8□□□□□ -0.84
CLTCL1-206ENST00000540896 RNF25Q96BH1 459 aaPredicted RBP9.8□□□□□ -0.84
CLTCL1-206ENST00000540896 ATP7AQ04656 1500 aa9.8□□□□□ -0.84
CLTCL1-206ENST00000540896 HFM1A2PYH4 1435 aa9.8□□□□□ -0.84
CLTCL1-206ENST00000540896 RTEL1-TNFRSF6BF6WH68 1400 aa9.8□□□□□ -0.84
CLTCL1-206ENST00000540896 ATP10AO60312 1499 aa9.79□□□□□ -0.84
CLTCL1-206ENST00000540896 KIDINS220Q9ULH0 1771 aa9.79□□□□□ -0.84
CLTCL1-206ENST00000540896 HRCP23327 699 aa9.79□□□□□ -0.84
CLTCL1-206ENST00000540896 TRIM52Q96A61 297 aa9.79□□□□□ -0.84
CLTCL1-206ENST00000540896 NCOA1Q15788 1441 aa9.79□□□□□ -0.84
CLTCL1-206ENST00000540896 SHANK2Q9UPX8 1470 aa9.79□□□□□ -0.84
CLTCL1-206ENST00000540896 ARHGEF40Q8TER5 1519 aa9.78□□□□□ -0.84
CLTCL1-206ENST00000540896 NAIPQ13075 1403 aa9.78□□□□□ -0.84
CLTCL1-206ENST00000540896 INO80Q9ULG1 1556 aaPredicted RBP9.78□□□□□ -0.84
CLTCL1-206ENST00000540896 ARID4BQ4LE39 1312 aaPredicted RBP9.78□□□□□ -0.84
CLTCL1-206ENST00000540896 ABCA6Q8N139 1617 aa9.78□□□□□ -0.84
CLTCL1-206ENST00000540896 DIP2CQ9Y2E4 1556 aa9.77□□□□□ -0.85
CLTCL1-206ENST00000540896 MAST1Q9Y2H9 1570 aa9.77□□□□□ -0.85
CLTCL1-206ENST00000540896 ACIN1Q9UKV3 1341 aaKnown RBP9.77□□□□□ -0.85
CLTCL1-206ENST00000540896 CROCC2H7BZ55 1655 aa9.77□□□□□ -0.85
CLTCL1-206ENST00000540896 KIF15Q9NS87 1388 aa9.76□□□□□ -0.85
CLTCL1-206ENST00000540896 ADGRL2O95490 1459 aa9.75□□□□□ -0.85
CLTCL1-206ENST00000540896 EMP3P54852 163 aa9.75□□□□□ -0.85
CLTCL1-206ENST00000540896 DOK7Q18PE1 504 aa9.75□□□□□ -0.85
CLTCL1-206ENST00000540896 DHX29Q7Z478 1369 aaKnown RBP9.75□□□□□ -0.85
CLTCL1-206ENST00000540896 ADGBQ8N7X0 1667 aa9.74□□□□□ -0.85
CLTCL1-206ENST00000540896 A2MP01023 1474 aa9.74□□□□□ -0.85
CLTCL1-206ENST00000540896 ECM2O94769 699 aaPredicted RBP9.74□□□□□ -0.85
CLTCL1-206ENST00000540896 NLRP6P59044 892 aa9.74□□□□□ -0.85
CLTCL1-206ENST00000540896 MARVELD3Q96A59 401 aa9.74□□□□□ -0.85
CLTCL1-206ENST00000540896 ANKRD50Q9ULJ7 1429 aa9.73□□□□□ -0.85
CLTCL1-206ENST00000540896 PLXNC1O60486 1568 aa9.73□□□□□ -0.85
CLTCL1-206ENST00000540896 REREQ9P2R6 1566 aa9.73□□□□□ -0.85
CLTCL1-206ENST00000540896 RIMBP2O15034 1052 aa9.73□□□□□ -0.85
CLTCL1-206ENST00000540896 MLECQ14165 292 aa9.73□□□□□ -0.85
CLTCL1-206ENST00000540896 ZNF710Q8N1W2 664 aa9.73□□□□□ -0.85
CLTCL1-206ENST00000540896 SIGLEC1Q9BZZ2 1709 aa9.73□□□□□ -0.85
CLTCL1-206ENST00000540896 KIF3BO15066 747 aa9.72□□□□□ -0.85
CLTCL1-206ENST00000540896 MICALL2Q8IY33 904 aa9.72□□□□□ -0.85
CLTCL1-206ENST00000540896 BCL11BQ9C0K0 894 aaPredicted RBP9.72□□□□□ -0.85
CLTCL1-206ENST00000540896 PHF8Q9UPP1 1060 aa9.71□□□□□ -0.86
CLTCL1-206ENST00000540896 DHX57Q6P158 1386 aaKnown RBP9.71□□□□□ -0.86
CLTCL1-206ENST00000540896 DUOX2Q9NRD8 1548 aa9.71□□□□□ -0.86
CLTCL1-206ENST00000540896 ZEB1P37275 1124 aaPredicted RBP9.7□□□□□ -0.86
CLTCL1-206ENST00000540896 GGT6Q6P531 493 aa9.7□□□□□ -0.86
CLTCL1-206ENST00000540896 MPHOSPH9Q99550 1183 aa9.7□□□□□ -0.86
CLTCL1-206ENST00000540896 STK24Q9Y6E0 443 aa9.7□□□□□ -0.86
CLTCL1-206ENST00000540896 NUP155O75694 1391 aa9.7□□□□□ -0.86
CLTCL1-206ENST00000540896 AGLP35573 1532 aa9.7□□□□□ -0.86
CLTCL1-206ENST00000540896 GCC2Q8IWJ2 1684 aa9.69□□□□□ -0.86
CLTCL1-206ENST00000540896 ERBINQ96RT1 1412 aa9.68□□□□□ -0.86
CLTCL1-206ENST00000540896 KDM4FA0A1W2PPD8 638 aa9.68□□□□□ -0.86
CLTCL1-206ENST00000540896 STK25O00506 426 aa9.68□□□□□ -0.86
CLTCL1-206ENST00000540896 HOXB3P14651 431 aaPredicted RBP9.68□□□□□ -0.86
CLTCL1-206ENST00000540896 BCORL1Q5H9F3 1711 aa9.68□□□□□ -0.86
CLTCL1-206ENST00000540896 MS4A4AQ96JQ5 239 aa9.67□□□□□ -0.86
CLTCL1-206ENST00000540896 ESF1Q9H501 851 aaKnown RBP9.67□□□□□ -0.86
CLTCL1-206ENST00000540896 ZSWIM6Q9HCJ5 1215 aa9.67□□□□□ -0.86
CLTCL1-206ENST00000540896 EIF2AK4Q9P2K8 1649 aaKnown RBP9.67□□□□□ -0.86
CLTCL1-206ENST00000540896 KANK1Q14678 1352 aa9.66□□□□□ -0.86
CLTCL1-206ENST00000540896 CLSPNQ9HAW4 1339 aa9.66□□□□□ -0.86
CLTCL1-206ENST00000540896 HOXB1P14653 301 aaPredicted RBP9.66□□□□□ -0.86
CLTCL1-206ENST00000540896 ADAMTSL3P82987 1691 aa9.65□□□□□ -0.86
CLTCL1-206ENST00000540896 FAM205CA6NFA0 338 aa9.65□□□□□ -0.86
CLTCL1-206ENST00000540896 PKD2Q13563 968 aa9.65□□□□□ -0.86
CLTCL1-206ENST00000540896 MADDQ8WXG6 1647 aa9.64□□□□□ -0.87
CLTCL1-206ENST00000540896 WASHC2CQ9Y4E1 1318 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms