RNA–Protein interactions for RNA: ENST00000540875.1

AC090023.2-201, humanhuman

TSL 3 BASIC

Gene AC090023.2, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090023.2-201ENST00000540875 SUPT5HO00267 1087 aaKnown RBP7.14□□□□□ -1.27
AC090023.2-201ENST00000540875 LSM11P83369 360 aaKnown RBP eCLIP7.14□□□□□ -1.27
AC090023.2-201ENST00000540875 KRTAP3-3Q9BYR6 98 aa7.14□□□□□ -1.27
AC090023.2-201ENST00000540875 KRTAP3-2Q9BYR7 98 aa7.14□□□□□ -1.27
AC090023.2-201ENST00000540875 VPS9D1Q9Y2B5 631 aa7.14□□□□□ -1.27
AC090023.2-201ENST00000540875 MAP2K5Q13163 448 aa7.13□□□□□ -1.27
AC090023.2-201ENST00000540875 FAM161AQ3B820 660 aa7.13□□□□□ -1.27
AC090023.2-201ENST00000540875 KIAA1468Q9P260 1216 aa7.13□□□□□ -1.27
AC090023.2-201ENST00000540875 TK2O00142 265 aa7.12□□□□□ -1.27
AC090023.2-201ENST00000540875 PDIA4P13667 645 aaKnown RBP7.12□□□□□ -1.27
AC090023.2-201ENST00000540875 ANKRD13DQ6ZTN6 518 aa7.12□□□□□ -1.27
AC090023.2-201ENST00000540875 PACS2Q86VP3 889 aa7.12□□□□□ -1.27
AC090023.2-201ENST00000540875 AK7Q96M32 723 aa7.12□□□□□ -1.27
AC090023.2-201ENST00000540875 TATDN2Q93075 761 aa7.11□□□□□ -1.27
AC090023.2-201ENST00000540875 RABGEF1Q9UJ41 708 aa7.11□□□□□ -1.27
AC090023.2-201ENST00000540875 ADGRG1Q9Y653 693 aa7.11□□□□□ -1.27
AC090023.2-201ENST00000540875 SCRIBQ14160 1630 aa7.1□□□□□ -1.27
AC090023.2-201ENST00000540875 BHMG1C9JSJ3 638 aaPredicted RBP7.1□□□□□ -1.27
AC090023.2-201ENST00000540875 PDE4CQ08493 712 aa7.1□□□□□ -1.27
AC090023.2-201ENST00000540875 ADGRD1Q6QNK2 874 aa7.1□□□□□ -1.27
AC090023.2-201ENST00000540875 NUDT18Q6ZVK8 323 aa7.1□□□□□ -1.27
AC090023.2-201ENST00000540875 CCDC102AQ96A19 550 aa7.1□□□□□ -1.27
AC090023.2-201ENST00000540875 EYA1Q99502 592 aa7.1□□□□□ -1.27
AC090023.2-201ENST00000540875 USP35Q9P2H5 1018 aa7.1□□□□□ -1.27
AC090023.2-201ENST00000540875 SMAPO00193 183 aa7.09□□□□□ -1.27
AC090023.2-201ENST00000540875 TRIM66O15016 1216 aa7.09□□□□□ -1.27
AC090023.2-201ENST00000540875 HRO43593 1189 aa7.09□□□□□ -1.27
AC090023.2-201ENST00000540875 OATP04181 439 aa7.09□□□□□ -1.27
AC090023.2-201ENST00000540875 FGD1P98174 961 aa7.09□□□□□ -1.27
AC090023.2-201ENST00000540875 ZNF326Q5BKZ1 582 aaKnown RBP7.09□□□□□ -1.27
AC090023.2-201ENST00000540875 PXYLP1Q8TE99 480 aa7.09□□□□□ -1.27
AC090023.2-201ENST00000540875 CCDC136Q96JN2 1154 aa7.09□□□□□ -1.27
AC090023.2-201ENST00000540875 PHOX2BQ99453 314 aa7.09□□□□□ -1.27
AC090023.2-201ENST00000540875 PNMA3Q9UL41 463 aa7.09□□□□□ -1.27
AC090023.2-201ENST00000540875 TAF7LQ5H9L4 462 aa7.08□□□□□ -1.28
AC090023.2-201ENST00000540875 RTL5Q5HYW3 569 aaPredicted RBP7.08□□□□□ -1.28
AC090023.2-201ENST00000540875 METTL3Q86U44 580 aaKnown RBP7.07□□□□□ -1.28
AC090023.2-201ENST00000540875 RBM46Q8TBY0 533 aaKnown RBP7.07□□□□□ -1.28
AC090023.2-201ENST00000540875 NBPF26B4DH59 902 aa7.06□□□□□ -1.28
AC090023.2-201ENST00000540875 SEPT9Q9UHD8 586 aaPredicted RBP7.06□□□□□ -1.28
AC090023.2-201ENST00000540875 WRNQ14191 1432 aaPredicted RBP eCLIP7.06□□□□□ -1.28
AC090023.2-201ENST00000540875 WASHC2CQ9Y4E1 1318 aa7.05□□□□□ -1.28
AC090023.2-201ENST00000540875 LOC105371045A0A1W2PR82 267 aa7.05□□□□□ -1.28
AC090023.2-201ENST00000540875 RCCD1A6NED2 376 aa7.04□□□□□ -1.28
AC090023.2-201ENST00000540875 PDE4DQ08499 809 aa7.04□□□□□ -1.28
AC090023.2-201ENST00000540875 NLRP7Q8WX94 980 aa7.04□□□□□ -1.28
AC090023.2-201ENST00000540875 ZMYND15Q9H091 742 aa7.04□□□□□ -1.28
AC090023.2-201ENST00000540875 CDK11AQ9UQ88 783 aaPredicted RBP7.04□□□□□ -1.28
AC090023.2-201ENST00000540875 NOP58Q9Y2X3 529 aaKnown RBP7.04□□□□□ -1.28
AC090023.2-201ENST00000540875 WASHC2AQ641Q2 1341 aa7.03□□□□□ -1.28
AC090023.2-201ENST00000540875 AAMPQ13685 434 aa7.03□□□□□ -1.28
AC090023.2-201ENST00000540875 AMHR2Q16671 573 aa7.03□□□□□ -1.28
AC090023.2-201ENST00000540875 LAPTM4BQ86VI4 370 aa7.03□□□□□ -1.28
AC090023.2-201ENST00000540875 REPIN1Q9BWE0 567 aaKnown RBP7.03□□□□□ -1.28
AC090023.2-201ENST00000540875 NBPF3Q9H094 633 aa7.03□□□□□ -1.28
AC090023.2-201ENST00000540875 THOC2Q8NI27 1593 aaKnown RBP7.03□□□□□ -1.28
AC090023.2-201ENST00000540875 NESP48681 1621 aa7.02□□□□□ -1.29
AC090023.2-201ENST00000540875 RRP9O43818 475 aaKnown RBP7.02□□□□□ -1.29
AC090023.2-201ENST00000540875 FAM98CQ17RN3 349 aaKnown RBP7.02□□□□□ -1.29
AC090023.2-201ENST00000540875 MRPL50Q8N5N7 158 aaKnown RBP7.02□□□□□ -1.29
AC090023.2-201ENST00000540875 TMUB1Q9BVT8 246 aa7.02□□□□□ -1.29
AC090023.2-201ENST00000540875 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.01□□□□□ -1.29
AC090023.2-201ENST00000540875 DNAJB2P25686 324 aa7.01□□□□□ -1.29
AC090023.2-201ENST00000540875 MDM2Q00987 491 aaPredicted RBP7.01□□□□□ -1.29
AC090023.2-201ENST00000540875 ZFRQ96KR1 1074 aaKnown RBP7.01□□□□□ -1.29
AC090023.2-201ENST00000540875 STAC3Q96MF2 364 aa7.01□□□□□ -1.29
AC090023.2-201ENST00000540875 FAM43AQ8N2R8 423 aa7□□□□□ -1.29
AC090023.2-201ENST00000540875 TMEM134Q9H6X4 195 aa7□□□□□ -1.29
AC090023.2-201ENST00000540875 BRPF1P55201 1214 aaPredicted RBP6.99□□□□□ -1.29
AC090023.2-201ENST00000540875 SWT1Q5T5J6 900 aaKnown RBP6.99□□□□□ -1.29
AC090023.2-201ENST00000540875 PARP9Q8IXQ6 854 aa6.99□□□□□ -1.29
AC090023.2-201ENST00000540875 IL27Q8NEV9 243 aa6.99□□□□□ -1.29
AC090023.2-201ENST00000540875 ZCCHC6Q5VYS8 1495 aaKnown RBP6.98□□□□□ -1.29
AC090023.2-201ENST00000540875 CLCN1P35523 988 aa6.98□□□□□ -1.29
AC090023.2-201ENST00000540875 HDGFP51858 240 aaKnown RBP6.98□□□□□ -1.29
AC090023.2-201ENST00000540875 MMRN1Q13201 1228 aa6.98□□□□□ -1.29
AC090023.2-201ENST00000540875 SAMD7Q7Z3H4 446 aa6.98□□□□□ -1.29
AC090023.2-201ENST00000540875 GPBP1L1Q9HC44 474 aaPredicted RBP6.98□□□□□ -1.29
AC090023.2-201ENST00000540875 CENPJQ9HC77 1338 aaPredicted RBP6.98□□□□□ -1.29
AC090023.2-201ENST00000540875 GOLGA8CPA6NN73 597 aa6.97□□□□□ -1.29
AC090023.2-201ENST00000540875 SMARCA2P51531 1590 aa6.97□□□□□ -1.29
AC090023.2-201ENST00000540875 TTLL12Q14166 644 aaPredicted RBP6.97□□□□□ -1.29
AC090023.2-201ENST00000540875 NEUROD2Q15784 382 aa6.97□□□□□ -1.29
AC090023.2-201ENST00000540875 SPNS2Q8IVW8 549 aa6.97□□□□□ -1.29
AC090023.2-201ENST00000540875 GPCPD1Q9NPB8 672 aa6.97□□□□□ -1.29
AC090023.2-201ENST00000540875 BAZ1AQ9NRL2 1556 aaPredicted RBP6.97□□□□□ -1.29
AC090023.2-201ENST00000540875 SSTR3P32745 418 aaPredicted RBP6.96□□□□□ -1.3
AC090023.2-201ENST00000540875 GIGYF2Q6Y7W6 1299 aaKnown RBP6.96□□□□□ -1.3
AC090023.2-201ENST00000540875 HOMEZQ8IX15 550 aa6.96□□□□□ -1.3
AC090023.2-201ENST00000540875 FAM217BQ9NTX9 383 aaPredicted RBP6.96□□□□□ -1.3
AC090023.2-201ENST00000540875 EEA1Q15075 1411 aa6.95□□□□□ -1.3
AC090023.2-201ENST00000540875 RIMBP3CA6NJZ7 1639 aa6.95□□□□□ -1.3
AC090023.2-201ENST00000540875 RIMBP3BA6NNM3 1639 aa6.95□□□□□ -1.3
AC090023.2-201ENST00000540875 RIMBP3Q9UFD9 1639 aa6.95□□□□□ -1.3
AC090023.2-201ENST00000540875 WNT2BQ93097 391 aa6.95□□□□□ -1.3
AC090023.2-201ENST00000540875 KDM4CQ9H3R0 1056 aa6.95□□□□□ -1.3
AC090023.2-201ENST00000540875 SOWAHBA6NEL2 793 aa6.94□□□□□ -1.3
AC090023.2-201ENST00000540875 SLC10A3P09131 477 aa6.94□□□□□ -1.3
AC090023.2-201ENST00000540875 RBM10P98175 930 aaKnown RBP6.94□□□□□ -1.3
AC090023.2-201ENST00000540875 RSPH4AQ5TD94 716 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms