RNA–Protein interactions for RNA: ENST00000540430.5

LDHA-218, Transcript of lactate dehydrogenase A, humanhuman

TSL 2 BASIC

Gene LDHA, Length 2,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-218ENST00000540430 TOM1O60784 492 aa12.89□□□□□ -0.35
LDHA-218ENST00000540430 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.89□□□□□ -0.35
LDHA-218ENST00000540430 CHIC2Q9UKJ5 165 aa12.88□□□□□ -0.35
LDHA-218ENST00000540430 SCAF11Q99590 1463 aaKnown RBP12.87□□□□□ -0.35
LDHA-218ENST00000540430 SLIT1O75093 1534 aa12.87□□□□□ -0.35
LDHA-218ENST00000540430 LMTK2Q8IWU2 1503 aa12.87□□□□□ -0.35
LDHA-218ENST00000540430 ILDR2Q71H61 639 aa12.87□□□□□ -0.35
LDHA-218ENST00000540430 SETD5Q9C0A6 1442 aa12.87□□□□□ -0.35
LDHA-218ENST00000540430 ARHGAP23Q9P227 1491 aa12.87□□□□□ -0.35
LDHA-218ENST00000540430 ADGRL2O95490 1459 aa12.87□□□□□ -0.35
LDHA-218ENST00000540430 SALL2Q9Y467 1007 aaPredicted RBP12.85□□□□□ -0.35
LDHA-218ENST00000540430 STRCP1A6NGW2 1772 aa12.85□□□□□ -0.35
LDHA-218ENST00000540430 PIK3C2BO00750 1634 aa12.84□□□□□ -0.35
LDHA-218ENST00000540430 LTKP29376 864 aa12.84□□□□□ -0.35
LDHA-218ENST00000540430 PIP4K2BP78356 416 aa12.84□□□□□ -0.35
LDHA-218ENST00000540430 TXNDC2Q86VQ3 553 aa12.84□□□□□ -0.35
LDHA-218ENST00000540430 PPP4R2Q9NY27 417 aa12.84□□□□□ -0.35
LDHA-218ENST00000540430 SYNMO15061 1565 aa12.84□□□□□ -0.35
LDHA-218ENST00000540430 KDM5AP29375 1690 aaKnown RBP12.84□□□□□ -0.35
LDHA-218ENST00000540430 EID1Q9Y6B2 187 aa12.84□□□□□ -0.35
LDHA-218ENST00000540430 LRRC7Q96NW7 1537 aa12.83□□□□□ -0.36
LDHA-218ENST00000540430 FAM50AQ14320 339 aaKnown RBP12.83□□□□□ -0.36
LDHA-218ENST00000540430 HSPA1LP34931 641 aa12.83□□□□□ -0.36
LDHA-218ENST00000540430 TMEM2Q9UHN6 1383 aa12.82□□□□□ -0.36
LDHA-218ENST00000540430 EFCAB6Q5THR3 1501 aa12.82□□□□□ -0.36
LDHA-218ENST00000540430 STAG3Q9UJ98 1225 aa12.82□□□□□ -0.36
LDHA-218ENST00000540430 ALKQ9UM73 1620 aa12.82□□□□□ -0.36
LDHA-218ENST00000540430 SOCS7O14512 581 aa12.82□□□□□ -0.36
LDHA-218ENST00000540430 NOS1P29475 1434 aa12.81□□□□□ -0.36
LDHA-218ENST00000540430 ANKRD50Q9ULJ7 1429 aa12.81□□□□□ -0.36
LDHA-218ENST00000540430 IDI1Q13907 227 aa12.81□□□□□ -0.36
LDHA-218ENST00000540430 NOP58Q9Y2X3 529 aaKnown RBP12.8□□□□□ -0.36
LDHA-218ENST00000540430 RPRD2Q5VT52 1461 aaKnown RBP12.79□□□□□ -0.36
LDHA-218ENST00000540430 SLC52A1Q9NWF4 448 aa12.79□□□□□ -0.36
LDHA-218ENST00000540430 ADGRB3O60242 1522 aa12.78□□□□□ -0.36
LDHA-218ENST00000540430 TET3O43151 1660 aa12.77□□□□□ -0.37
LDHA-218ENST00000540430 HNRNPUQ00839 825 aaKnown RBP eCLIP12.76□□□□□ -0.37
LDHA-218ENST00000540430 SIN3AQ96ST3 1273 aa12.76□□□□□ -0.37
LDHA-218ENST00000540430 MED1Q15648 1581 aaPredicted RBP12.75□□□□□ -0.37
LDHA-218ENST00000540430 ROCK1Q13464 1354 aa12.75□□□□□ -0.37
LDHA-218ENST00000540430 XIRP1Q702N8 1843 aaKnown RBP12.75□□□□□ -0.37
LDHA-218ENST00000540430 UNC13BO14795 1591 aa12.75□□□□□ -0.37
LDHA-218ENST00000540430 GCC2Q8IWJ2 1684 aa12.74□□□□□ -0.37
LDHA-218ENST00000540430 KCNA6P17658 529 aa12.73□□□□□ -0.37
LDHA-218ENST00000540430 SLC26A8Q96RN1 970 aa12.72□□□□□ -0.37
LDHA-218ENST00000540430 ZFYVE9O95405 1425 aa12.71□□□□□ -0.37
LDHA-218ENST00000540430 TMEM94Q12767 1356 aa12.71□□□□□ -0.37
LDHA-218ENST00000540430 NKTRP30414 1462 aaKnown RBP12.7□□□□□ -0.38
LDHA-218ENST00000540430 TMEM131LA2VDJ0 1609 aa12.7□□□□□ -0.38
LDHA-218ENST00000540430 HDGFP51858 240 aaKnown RBP12.7□□□□□ -0.38
LDHA-218ENST00000540430 IRX6P78412 446 aaPredicted RBP12.7□□□□□ -0.38
LDHA-218ENST00000540430 MYO5BQ9ULV0 1848 aa12.7□□□□□ -0.38
LDHA-218ENST00000540430 IQGAP3Q86VI3 1631 aa12.7□□□□□ -0.38
LDHA-218ENST00000540430 NWD1Q149M9 1564 aa12.7□□□□□ -0.38
LDHA-218ENST00000540430 CCDC136Q96JN2 1154 aa12.7□□□□□ -0.38
LDHA-218ENST00000540430 E9PCH4 1651 aa12.69□□□□□ -0.38
LDHA-218ENST00000540430 PLEKHG1Q9ULL1 1385 aa12.69□□□□□ -0.38
LDHA-218ENST00000540430 PROSER2Q86WR7 435 aaPredicted RBP12.69□□□□□ -0.38
LDHA-218ENST00000540430 RIMS2Q9UQ26 1411 aa12.69□□□□□ -0.38
LDHA-218ENST00000540430 FAM135BQ49AJ0 1406 aa12.68□□□□□ -0.38
LDHA-218ENST00000540430 RTL5Q5HYW3 569 aaPredicted RBP12.68□□□□□ -0.38
LDHA-218ENST00000540430 SENP3Q9H4L4 574 aaPredicted RBP12.68□□□□□ -0.38
LDHA-218ENST00000540430 TONSLQ96HA7 1378 aa12.67□□□□□ -0.38
LDHA-218ENST00000540430 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.67□□□□□ -0.38
LDHA-218ENST00000540430 IPO9Q96P70 1041 aaKnown RBP12.67□□□□□ -0.38
LDHA-218ENST00000540430 PHF23Q9BUL5 403 aaPredicted RBP12.67□□□□□ -0.38
LDHA-218ENST00000540430 HIRIP3Q9BW71 556 aaPredicted RBP12.67□□□□□ -0.38
LDHA-218ENST00000540430 NUP155O75694 1391 aa12.67□□□□□ -0.38
LDHA-218ENST00000540430 NBR1Q14596 966 aa12.66□□□□□ -0.38
LDHA-218ENST00000540430 PAK3O75914 559 aaPredicted RBP12.66□□□□□ -0.38
LDHA-218ENST00000540430 CHD2O14647 1828 aaKnown RBP12.65□□□□□ -0.38
LDHA-218ENST00000540430 ANP32AP39687 249 aaKnown RBP12.65□□□□□ -0.38
LDHA-218ENST00000540430 ZBED9Q6R2W3 1325 aa12.65□□□□□ -0.38
LDHA-218ENST00000540430 CHGAP10645 457 aaKnown RBP12.65□□□□□ -0.39
LDHA-218ENST00000540430 TBX22Q9Y458 520 aa12.65□□□□□ -0.39
LDHA-218ENST00000540430 MSH6P52701 1360 aa12.64□□□□□ -0.39
LDHA-218ENST00000540430 RBM33Q96EV2 1170 aaKnown RBP12.64□□□□□ -0.39
LDHA-218ENST00000540430 ROBO1Q9Y6N7 1651 aa12.63□□□□□ -0.39
LDHA-218ENST00000540430 DIP2AQ14689 1571 aa12.63□□□□□ -0.39
LDHA-218ENST00000540430 B4GALNT3Q6L9W6 998 aa12.63□□□□□ -0.39
LDHA-218ENST00000540430 ADAMTS13Q76LX8 1427 aa12.62□□□□□ -0.39
LDHA-218ENST00000540430 WASHC2AQ641Q2 1341 aa12.62□□□□□ -0.39
LDHA-218ENST00000540430 PIK3R4Q99570 1358 aa12.62□□□□□ -0.39
LDHA-218ENST00000540430 NCOA3Q9Y6Q9 1424 aa12.61□□□□□ -0.39
LDHA-218ENST00000540430 USP35Q9P2H5 1018 aa12.61□□□□□ -0.39
LDHA-218ENST00000540430 ZBTB47Q9UFB7 747 aaPredicted RBP12.61□□□□□ -0.39
LDHA-218ENST00000540430 NUTM2DQ5VT03 806 aaPredicted RBP12.6□□□□□ -0.39
LDHA-218ENST00000540430 IL27Q8NEV9 243 aa12.6□□□□□ -0.39
LDHA-218ENST00000540430 SLAIN2Q9P270 581 aa12.6□□□□□ -0.39
LDHA-218ENST00000540430 SPHKAPQ2M3C7 1700 aa12.59□□□□□ -0.39
LDHA-218ENST00000540430 C11orf95C9JLR9 678 aaPredicted RBP12.59□□□□□ -0.39
LDHA-218ENST00000540430 TRPM2O94759 1503 aa12.58□□□□□ -0.4
LDHA-218ENST00000540430 EIF5BO60841 1220 aaKnown RBP12.58□□□□□ -0.4
LDHA-218ENST00000540430 RGS17Q9UGC6 210 aaPredicted RBP12.56□□□□□ -0.4
LDHA-218ENST00000540430 RNF123Q5XPI4 1314 aa12.56□□□□□ -0.4
LDHA-218ENST00000540430 C14orf37Q86TY3 774 aa12.56□□□□□ -0.4
LDHA-218ENST00000540430 C19orf44Q9H6X5 657 aa12.56□□□□□ -0.4
LDHA-218ENST00000540430 PHLPP1O60346 1717 aa12.55□□□□□ -0.4
LDHA-218ENST00000540430 CADPS2Q86UW7 1296 aa12.55□□□□□ -0.4
LDHA-218ENST00000540430 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms