RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 NPATQ14207 1427 aa11.49□□□□□ -0.57
DDB1-217ENST00000540166 DAPK1P53355 1430 aa11.48□□□□□ -0.57
DDB1-217ENST00000540166 MSH6P52701 1360 aa11.48□□□□□ -0.57
DDB1-217ENST00000540166 BCORL1Q5H9F3 1711 aa11.48□□□□□ -0.57
DDB1-217ENST00000540166 FER1L4A9Z1Z3 1794 aa11.47□□□□□ -0.57
DDB1-217ENST00000540166 RSPH6AQ9H0K4 717 aa11.47□□□□□ -0.57
DDB1-217ENST00000540166 DIP2CQ9Y2E4 1556 aa11.46□□□□□ -0.57
DDB1-217ENST00000540166 CCDC9Q9Y3X0 531 aaKnown RBP11.46□□□□□ -0.58
DDB1-217ENST00000540166 ABCC5O15440 1437 aa11.45□□□□□ -0.58
DDB1-217ENST00000540166 NPHP4O75161 1426 aaPredicted RBP11.45□□□□□ -0.58
DDB1-217ENST00000540166 CADPS2Q86UW7 1296 aa11.45□□□□□ -0.58
DDB1-217ENST00000540166 DDRGK1Q96HY6 314 aa11.45□□□□□ -0.58
DDB1-217ENST00000540166 HSPA5P11021 654 aaKnown RBP11.45□□□□□ -0.58
DDB1-217ENST00000540166 AGLP35573 1532 aa11.45□□□□□ -0.58
DDB1-217ENST00000540166 NUTM2FA1L443 756 aa11.45□□□□□ -0.58
DDB1-217ENST00000540166 SENP3-EIF4A1A0A087X0R7 540 aa11.44□□□□□ -0.58
DDB1-217ENST00000540166 DUOX2Q9NRD8 1548 aa11.44□□□□□ -0.58
DDB1-217ENST00000540166 SAFB2Q14151 953 aaKnown RBP eCLIP11.44□□□□□ -0.58
DDB1-217ENST00000540166 BRPF3Q9ULD4 1205 aa11.44□□□□□ -0.58
DDB1-217ENST00000540166 RICTORQ6R327 1708 aa11.43□□□□□ -0.58
DDB1-217ENST00000540166 KCNA6P17658 529 aa11.43□□□□□ -0.58
DDB1-217ENST00000540166 A2ML1A8K2U0 1454 aa11.43□□□□□ -0.58
DDB1-217ENST00000540166 MBD5Q9P267 1494 aa11.43□□□□□ -0.58
DDB1-217ENST00000540166 GSE1Q14687 1217 aa11.42□□□□□ -0.58
DDB1-217ENST00000540166 PTPRTO14522 1441 aa11.42□□□□□ -0.58
DDB1-217ENST00000540166 HSPA1LP34931 641 aa11.42□□□□□ -0.58
DDB1-217ENST00000540166 VSIG10Q8N0Z9 540 aa11.42□□□□□ -0.58
DDB1-217ENST00000540166 UGGT1Q9NYU2 1555 aa11.42□□□□□ -0.58
DDB1-217ENST00000540166 NLRP1Q9C000 1473 aa11.42□□□□□ -0.58
DDB1-217ENST00000540166 PTPRKQ15262 1439 aa11.42□□□□□ -0.58
DDB1-217ENST00000540166 FOXD1Q16676 465 aa11.41□□□□□ -0.58
DDB1-217ENST00000540166 AMOTL2Q9Y2J4 779 aa11.41□□□□□ -0.58
DDB1-217ENST00000540166 CAMSAP1Q5T5Y3 1602 aa11.41□□□□□ -0.58
DDB1-217ENST00000540166 MAP3K1Q13233 1512 aa11.41□□□□□ -0.58
DDB1-217ENST00000540166 CDC42BPBQ9Y5S2 1711 aa11.41□□□□□ -0.58
DDB1-217ENST00000540166 ERBINQ96RT1 1412 aa11.41□□□□□ -0.58
DDB1-217ENST00000540166 KDM5CP41229 1560 aa11.4□□□□□ -0.58
DDB1-217ENST00000540166 FRMPD1Q5SYB0 1578 aa11.4□□□□□ -0.58
DDB1-217ENST00000540166 NCOA1Q15788 1441 aa11.4□□□□□ -0.58
DDB1-217ENST00000540166 ZBTB7CA1YPR0 619 aa11.4□□□□□ -0.58
DDB1-217ENST00000540166 LTKP29376 864 aa11.4□□□□□ -0.58
DDB1-217ENST00000540166 KDM5DQ9BY66 1539 aa11.4□□□□□ -0.58
DDB1-217ENST00000540166 CDC42BPAQ5VT25 1732 aa11.4□□□□□ -0.58
DDB1-217ENST00000540166 ADAMTSL3P82987 1691 aa11.39□□□□□ -0.59
DDB1-217ENST00000540166 CFAP65Q6ZU64 1925 aaKnown RBP11.39□□□□□ -0.59
DDB1-217ENST00000540166 ABCA6Q8N139 1617 aa11.39□□□□□ -0.59
DDB1-217ENST00000540166 NAP1L5Q96NT1 182 aaPredicted RBP11.39□□□□□ -0.59
DDB1-217ENST00000540166 PTPN23Q9H3S7 1636 aa11.39□□□□□ -0.59
DDB1-217ENST00000540166 C19orf44Q9H6X5 657 aa11.38□□□□□ -0.59
DDB1-217ENST00000540166 PZPP20742 1482 aa11.38□□□□□ -0.59
DDB1-217ENST00000540166 TMEM2Q9UHN6 1383 aa11.37□□□□□ -0.59
DDB1-217ENST00000540166 MPHOSPH9Q99550 1183 aa11.37□□□□□ -0.59
DDB1-217ENST00000540166 SLAIN2Q9P270 581 aa11.37□□□□□ -0.59
DDB1-217ENST00000540166 ESCO1Q5FWF5 840 aa11.37□□□□□ -0.59
DDB1-217ENST00000540166 NGLY1Q96IV0 654 aa11.36□□□□□ -0.59
DDB1-217ENST00000540166 ARXQ96QS3 562 aa11.36□□□□□ -0.59
DDB1-217ENST00000540166 TBX22Q9Y458 520 aa11.36□□□□□ -0.59
DDB1-217ENST00000540166 TCERG1O14776 1098 aaKnown RBP11.35□□□□□ -0.59
DDB1-217ENST00000540166 TMEM94Q12767 1356 aa11.35□□□□□ -0.59
DDB1-217ENST00000540166 CCDC144AA2RUR9 1427 aa11.35□□□□□ -0.59
DDB1-217ENST00000540166 RIMS2Q9UQ26 1411 aa11.35□□□□□ -0.59
DDB1-217ENST00000540166 CLTCQ00610 1675 aaKnown RBP11.35□□□□□ -0.59
DDB1-217ENST00000540166 SCAF11Q99590 1463 aaKnown RBP11.35□□□□□ -0.59
DDB1-217ENST00000540166 DCAF11Q8TEB1 546 aa11.35□□□□□ -0.59
DDB1-217ENST00000540166 ADAMTS2O95450 1211 aa11.34□□□□□ -0.59
DDB1-217ENST00000540166 TMC1Q8TDI8 760 aa11.34□□□□□ -0.59
DDB1-217ENST00000540166 KIDINS220Q9ULH0 1771 aa11.34□□□□□ -0.59
DDB1-217ENST00000540166 NGDNQ8NEJ9 315 aaKnown RBP11.34□□□□□ -0.59
DDB1-217ENST00000540166 L3MBTL2Q969R5 705 aa11.34□□□□□ -0.59
DDB1-217ENST00000540166 ADGBQ8N7X0 1667 aa11.33□□□□□ -0.6
DDB1-217ENST00000540166 ARHGEF5Q12774 1597 aa11.33□□□□□ -0.6
DDB1-217ENST00000540166 PSME1Q06323 249 aa11.33□□□□□ -0.6
DDB1-217ENST00000540166 ZBED9Q6R2W3 1325 aa11.32□□□□□ -0.6
DDB1-217ENST00000540166 WASHC2AQ641Q2 1341 aa11.32□□□□□ -0.6
DDB1-217ENST00000540166 PRKRIP1Q9H875 184 aaPredicted RBP11.32□□□□□ -0.6
DDB1-217ENST00000540166 ERVK-7P63135 1459 aa11.32□□□□□ -0.6
DDB1-217ENST00000540166 SHANK2Q9UPX8 1470 aa11.32□□□□□ -0.6
DDB1-217ENST00000540166 CEP170BQ9Y4F5 1589 aaPredicted RBP11.32□□□□□ -0.6
DDB1-217ENST00000540166 HSP90AA1P07900 732 aaKnown RBP11.31□□□□□ -0.6
DDB1-217ENST00000540166 PDE4AP27815 886 aa11.31□□□□□ -0.6
DDB1-217ENST00000540166 SF3B2Q13435 895 aaKnown RBP11.31□□□□□ -0.6
DDB1-217ENST00000540166 HSP90AA2PQ14568 343 aaPredicted RBP11.31□□□□□ -0.6
DDB1-217ENST00000540166 ROCK1Q13464 1354 aa11.31□□□□□ -0.6
DDB1-217ENST00000540166 PREX1Q8TCU6 1659 aa11.31□□□□□ -0.6
DDB1-217ENST00000540166 CCDC184Q52MB2 194 aa11.31□□□□□ -0.6
DDB1-217ENST00000540166 C11orf95C9JLR9 678 aaPredicted RBP11.3□□□□□ -0.6
DDB1-217ENST00000540166 LRRC59Q96AG4 307 aaKnown RBP11.3□□□□□ -0.6
DDB1-217ENST00000540166 C8orf37Q96NL8 207 aa11.3□□□□□ -0.6
DDB1-217ENST00000540166 RPGRIP1LQ68CZ1 1315 aa11.3□□□□□ -0.6
DDB1-217ENST00000540166 PLA2R1Q13018 1463 aa11.3□□□□□ -0.6
DDB1-217ENST00000540166 FRAT1Q92837 279 aaPredicted RBP11.29□□□□□ -0.6
DDB1-217ENST00000540166 NUDCQ9Y266 331 aa11.29□□□□□ -0.6
DDB1-217ENST00000540166 PNNQ9H307 717 aaKnown RBP11.29□□□□□ -0.6
DDB1-217ENST00000540166 TRAK1Q9UPV9 953 aa11.29□□□□□ -0.6
DDB1-217ENST00000540166 REREQ9P2R6 1566 aa11.28□□□□□ -0.6
DDB1-217ENST00000540166 SRPK2P78362 688 aaKnown RBP11.28□□□□□ -0.6
DDB1-217ENST00000540166 NFKBIBQ15653 356 aa11.28□□□□□ -0.6
DDB1-217ENST00000540166 TMEM132EQ6IEE7 984 aa11.28□□□□□ -0.6
DDB1-217ENST00000540166 FAM43AQ8N2R8 423 aa11.28□□□□□ -0.6
DDB1-217ENST00000540166 PODXL2Q9NZ53 605 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms