RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 GLI2P10070 1586 aa7.91□□□□□ -1.14
PTPRD-214ENST00000540109 ZMYM4Q5VZL5 1548 aa7.91□□□□□ -1.14
PTPRD-214ENST00000540109 POGZQ7Z3K3 1410 aa7.91□□□□□ -1.14
PTPRD-214ENST00000540109 PNNQ9H307 717 aaKnown RBP7.91□□□□□ -1.14
PTPRD-214ENST00000540109 HECW2Q9P2P5 1572 aa7.91□□□□□ -1.14
PTPRD-214ENST00000540109 RALBP1Q15311 655 aa7.9□□□□□ -1.14
PTPRD-214ENST00000540109 L1TD1Q5T7N2 865 aaKnown RBP7.9□□□□□ -1.14
PTPRD-214ENST00000540109 A2MP01023 1474 aa7.9□□□□□ -1.14
PTPRD-214ENST00000540109 MYOM2P54296 1465 aa7.9□□□□□ -1.14
PTPRD-214ENST00000540109 PRKRIP1Q9H875 184 aaPredicted RBP7.9□□□□□ -1.14
PTPRD-214ENST00000540109 PLA2R1Q13018 1463 aa7.9□□□□□ -1.14
PTPRD-214ENST00000540109 E9PCH4 1651 aa7.9□□□□□ -1.15
PTPRD-214ENST00000540109 EFCAB6Q5THR3 1501 aa7.9□□□□□ -1.15
PTPRD-214ENST00000540109 DCAF11Q8TEB1 546 aa7.89□□□□□ -1.15
PTPRD-214ENST00000540109 PTMSP20962 102 aa7.89□□□□□ -1.15
PTPRD-214ENST00000540109 CD109Q6YHK3 1445 aa7.89□□□□□ -1.15
PTPRD-214ENST00000540109 ZC3H13Q5T200 1668 aaKnown RBP7.89□□□□□ -1.15
PTPRD-214ENST00000540109 FAM9BQ8IZU0 186 aa7.89□□□□□ -1.15
PTPRD-214ENST00000540109 COL17A1Q9UMD9 1497 aaPredicted RBP7.88□□□□□ -1.15
PTPRD-214ENST00000540109 MADDQ8WXG6 1647 aa7.88□□□□□ -1.15
PTPRD-214ENST00000540109 BRD4O60885 1362 aaPredicted RBP7.87□□□□□ -1.15
PTPRD-214ENST00000540109 BECN1Q14457 450 aa7.87□□□□□ -1.15
PTPRD-214ENST00000540109 DNTTIP2Q5QJE6 756 aaKnown RBP7.87□□□□□ -1.15
PTPRD-214ENST00000540109 KIDINS220Q9ULH0 1771 aa7.87□□□□□ -1.15
PTPRD-214ENST00000540109 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.87□□□□□ -1.15
PTPRD-214ENST00000540109 RPGRIP1LQ68CZ1 1315 aa7.86□□□□□ -1.15
PTPRD-214ENST00000540109 PDIA4P13667 645 aaKnown RBP7.86□□□□□ -1.15
PTPRD-214ENST00000540109 ZBED9Q6R2W3 1325 aa7.86□□□□□ -1.15
PTPRD-214ENST00000540109 TMF1P82094 1093 aa7.86□□□□□ -1.15
PTPRD-214ENST00000540109 B4GALNT3Q6L9W6 998 aa7.86□□□□□ -1.15
PTPRD-214ENST00000540109 HIRIP3Q9BW71 556 aaPredicted RBP7.86□□□□□ -1.15
PTPRD-214ENST00000540109 SCAF11Q99590 1463 aaKnown RBP7.86□□□□□ -1.15
PTPRD-214ENST00000540109 MROH1Q8NDA8 1641 aa7.86□□□□□ -1.15
PTPRD-214ENST00000540109 KIF1BO60333 1816 aa7.86□□□□□ -1.15
PTPRD-214ENST00000540109 IQGAP1P46940 1657 aa7.85□□□□□ -1.15
PTPRD-214ENST00000540109 MRS2Q9HD23 443 aa7.85□□□□□ -1.15
PTPRD-214ENST00000540109 PAXIP1Q6ZW49 1069 aaPredicted RBP7.85□□□□□ -1.15
PTPRD-214ENST00000540109 CLTCL1P53675 1640 aa7.85□□□□□ -1.15
PTPRD-214ENST00000540109 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.84□□□□□ -1.15
PTPRD-214ENST00000540109 SETBP1Q9Y6X0 1596 aa7.84□□□□□ -1.15
PTPRD-214ENST00000540109 MAP3K4Q9Y6R4 1608 aa7.84□□□□□ -1.15
PTPRD-214ENST00000540109 MYBBP1AQ9BQG0 1328 aaKnown RBP7.84□□□□□ -1.15
PTPRD-214ENST00000540109 ARHGAP31Q2M1Z3 1444 aa7.84□□□□□ -1.15
PTPRD-214ENST00000540109 PPP6R1Q9UPN7 881 aa7.84□□□□□ -1.15
PTPRD-214ENST00000540109 REREQ9P2R6 1566 aa7.84□□□□□ -1.16
PTPRD-214ENST00000540109 APPP05067 770 aa7.83□□□□□ -1.16
PTPRD-214ENST00000540109 PPP4R2Q9NY27 417 aa7.83□□□□□ -1.16
PTPRD-214ENST00000540109 SYNMO15061 1565 aa7.83□□□□□ -1.16
PTPRD-214ENST00000540109 AFAP1Q8N556 730 aa7.83□□□□□ -1.16
PTPRD-214ENST00000540109 ADGRB3O60242 1522 aa7.83□□□□□ -1.16
PTPRD-214ENST00000540109 SBNO2Q9Y2G9 1366 aa7.83□□□□□ -1.16
PTPRD-214ENST00000540109 NRXN1Q9ULB1 1477 aa7.83□□□□□ -1.16
PTPRD-214ENST00000540109 KIF3BO15066 747 aa7.83□□□□□ -1.16
PTPRD-214ENST00000540109 KDM2AQ9Y2K7 1162 aa7.82□□□□□ -1.16
PTPRD-214ENST00000540109 NPC1L1Q9UHC9 1359 aa7.82□□□□□ -1.16
PTPRD-214ENST00000540109 AEBP2Q6ZN18 517 aaPredicted RBP7.82□□□□□ -1.16
PTPRD-214ENST00000540109 ST20-MTHFSA0A0A6YYL1 179 aa7.82□□□□□ -1.16
PTPRD-214ENST00000540109 CANXP27824 592 aaKnown RBP7.82□□□□□ -1.16
PTPRD-214ENST00000540109 MAPK8IP2Q13387 824 aaPredicted RBP7.82□□□□□ -1.16
PTPRD-214ENST00000540109 IFT172Q9UG01 1749 aa7.82□□□□□ -1.16
PTPRD-214ENST00000540109 ZBTB7CA1YPR0 619 aa7.82□□□□□ -1.16
PTPRD-214ENST00000540109 PPRC1Q5VV67 1664 aaKnown RBP7.82□□□□□ -1.16
PTPRD-214ENST00000540109 MYO3AQ8NEV4 1616 aa7.81□□□□□ -1.16
PTPRD-214ENST00000540109 C11orf95C9JLR9 678 aaPredicted RBP7.81□□□□□ -1.16
PTPRD-214ENST00000540109 NLRP13Q86W25 1043 aa7.81□□□□□ -1.16
PTPRD-214ENST00000540109 ABCC3O15438 1527 aa7.81□□□□□ -1.16
PTPRD-214ENST00000540109 FANCIQ9NVI1 1328 aa7.81□□□□□ -1.16
PTPRD-214ENST00000540109 PARD3Q8TEW0 1356 aa7.81□□□□□ -1.16
PTPRD-214ENST00000540109 TNNT3P45378 269 aaPredicted RBP7.8□□□□□ -1.16
PTPRD-214ENST00000540109 GOLGA6L22H0YM25 854 aa7.8□□□□□ -1.16
PTPRD-214ENST00000540109 CAMSAP1Q5T5Y3 1602 aa7.8□□□□□ -1.16
PTPRD-214ENST00000540109 ABCA6Q8N139 1617 aa7.8□□□□□ -1.16
PTPRD-214ENST00000540109 PUS7Q96PZ0 661 aaKnown RBP7.8□□□□□ -1.16
PTPRD-214ENST00000540109 BCL11BQ9C0K0 894 aaPredicted RBP7.8□□□□□ -1.16
PTPRD-214ENST00000540109 DIP2CQ9Y2E4 1556 aa7.8□□□□□ -1.16
PTPRD-214ENST00000540109 FRMPD1Q5SYB0 1578 aa7.8□□□□□ -1.16
PTPRD-214ENST00000540109 PTMAP06454 111 aaKnown RBP7.8□□□□□ -1.16
PTPRD-214ENST00000540109 PDE3BQ13370 1112 aa7.8□□□□□ -1.16
PTPRD-214ENST00000540109 MTERF4Q7Z6M4 381 aaKnown RBP7.8□□□□□ -1.16
PTPRD-214ENST00000540109 C14orf37Q86TY3 774 aa7.8□□□□□ -1.16
PTPRD-214ENST00000540109 SMG6Q86US8 1419 aaKnown RBP7.79□□□□□ -1.16
PTPRD-214ENST00000540109 KDM5AP29375 1690 aaKnown RBP7.79□□□□□ -1.16
PTPRD-214ENST00000540109 MAP7D2Q96T17 732 aa7.79□□□□□ -1.16
PTPRD-214ENST00000540109 ZMYND15Q9H091 742 aa7.79□□□□□ -1.16
PTPRD-214ENST00000540109 AGLP35573 1532 aa7.79□□□□□ -1.16
PTPRD-214ENST00000540109 RICTORQ6R327 1708 aa7.79□□□□□ -1.16
PTPRD-214ENST00000540109 TMC1Q8TDI8 760 aa7.79□□□□□ -1.16
PTPRD-214ENST00000540109 ZFYVE9O95405 1425 aa7.79□□□□□ -1.16
PTPRD-214ENST00000540109 NGEFQ8N5V2 710 aa7.79□□□□□ -1.16
PTPRD-214ENST00000540109 IPO9Q96P70 1041 aaKnown RBP7.79□□□□□ -1.16
PTPRD-214ENST00000540109 RGL3Q3MIN7 710 aa7.78□□□□□ -1.16
PTPRD-214ENST00000540109 LRPPRCP42704 1394 aaKnown RBP7.78□□□□□ -1.16
PTPRD-214ENST00000540109 NOS1P29475 1434 aa7.78□□□□□ -1.16
PTPRD-214ENST00000540109 MSNP26038 577 aaKnown RBP7.78□□□□□ -1.16
PTPRD-214ENST00000540109 CFAP44Q96MT7 982 aa7.78□□□□□ -1.16
PTPRD-214ENST00000540109 PIK3C2BO00750 1634 aa7.77□□□□□ -1.17
PTPRD-214ENST00000540109 SENP3-EIF4A1A0A087X0R7 540 aa7.77□□□□□ -1.17
PTPRD-214ENST00000540109 BRPF3Q9ULD4 1205 aa7.77□□□□□ -1.17
PTPRD-214ENST00000540109 TESK2Q96S53 571 aa7.77□□□□□ -1.17
PTPRD-214ENST00000540109 ZNF526Q8TF50 670 aaPredicted RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms