RNA–Protein interactions for RNA: ENST00000539977.1

PABPC1P4-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 4, humanhuman

BASIC

Gene PABPC1P4, Length 1,875 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P4-201ENST00000539977 WASHC2AQ641Q2 1341 aa14.52□□□□□ -0.09
PABPC1P4-201ENST00000539977 NEURL4Q96JN8 1562 aa14.52□□□□□ -0.09
PABPC1P4-201ENST00000539977 MADDQ8WXG6 1647 aa14.51□□□□□ -0.09
PABPC1P4-201ENST00000539977 VGFO15240 615 aaPredicted RBP14.5□□□□□ -0.09
PABPC1P4-201ENST00000539977 POLR3GLQ9BT43 218 aa14.5□□□□□ -0.09
PABPC1P4-201ENST00000539977 GPRASP1Q5JY77 1395 aa14.5□□□□□ -0.09
PABPC1P4-201ENST00000539977 TRPM1Q7Z4N2 1603 aa14.5□□□□□ -0.09
PABPC1P4-201ENST00000539977 TMEM132EQ6IEE7 984 aa14.5□□□□□ -0.09
PABPC1P4-201ENST00000539977 MYOM2P54296 1465 aa14.5□□□□□ -0.09
PABPC1P4-201ENST00000539977 MIER1Q8N108 512 aa14.48□□□□□ -0.09
PABPC1P4-201ENST00000539977 TMEM131LA2VDJ0 1609 aa14.48□□□□□ -0.09
PABPC1P4-201ENST00000539977 A2ML1A8K2U0 1454 aa14.48□□□□□ -0.09
PABPC1P4-201ENST00000539977 NEXMIFQ5QGS0 1516 aa14.47□□□□□ -0.09
PABPC1P4-201ENST00000539977 NRXN1Q9ULB1 1477 aa14.47□□□□□ -0.09
PABPC1P4-201ENST00000539977 C14orf93Q9H972 538 aaKnown RBP14.46□□□□□ -0.09
PABPC1P4-201ENST00000539977 PIK3C2GO75747 1445 aa14.46□□□□□ -0.09
PABPC1P4-201ENST00000539977 KIF7Q2M1P5 1343 aa14.46□□□□□ -0.09
PABPC1P4-201ENST00000539977 CCDC7Q96M83 1385 aa14.45□□□□□ -0.1
PABPC1P4-201ENST00000539977 FER1L4A9Z1Z3 1794 aa14.45□□□□□ -0.1
PABPC1P4-201ENST00000539977 RIMS2Q9UQ26 1411 aa14.44□□□□□ -0.1
PABPC1P4-201ENST00000539977 TRAK1Q9UPV9 953 aa14.44□□□□□ -0.1
PABPC1P4-201ENST00000539977 IFT172Q9UG01 1749 aa14.43□□□□□ -0.1
PABPC1P4-201ENST00000539977 PPLO60437 1756 aa14.43□□□□□ -0.1
PABPC1P4-201ENST00000539977 C3P01024 1663 aa14.43□□□□□ -0.1
PABPC1P4-201ENST00000539977 MYO5BQ9ULV0 1848 aa14.42□□□□□ -0.1
PABPC1P4-201ENST00000539977 TESK2Q96S53 571 aa14.42□□□□□ -0.1
PABPC1P4-201ENST00000539977 STK26Q9P289 416 aa14.42□□□□□ -0.1
PABPC1P4-201ENST00000539977 SCAF11Q99590 1463 aaKnown RBP14.41□□□□□ -0.1
PABPC1P4-201ENST00000539977 RIMS1Q86UR5 1692 aaKnown RBP14.41□□□□□ -0.1
PABPC1P4-201ENST00000539977 BCANQ96GW7 911 aa14.4□□□□□ -0.1
PABPC1P4-201ENST00000539977 ZFYVE9O95405 1425 aa14.4□□□□□ -0.1
PABPC1P4-201ENST00000539977 LTKP29376 864 aa14.4□□□□□ -0.1
PABPC1P4-201ENST00000539977 TMEM2Q9UHN6 1383 aa14.4□□□□□ -0.1
PABPC1P4-201ENST00000539977 NLRP1Q9C000 1473 aa14.39□□□□□ -0.11
PABPC1P4-201ENST00000539977 DISP3Q9P2K9 1392 aa14.38□□□□□ -0.11
PABPC1P4-201ENST00000539977 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.38□□□□□ -0.11
PABPC1P4-201ENST00000539977 TXNDC2Q86VQ3 553 aa14.38□□□□□ -0.11
PABPC1P4-201ENST00000539977 ADAMTSL3P82987 1691 aa14.37□□□□□ -0.11
PABPC1P4-201ENST00000539977 SAFB2Q14151 953 aaKnown RBP eCLIP14.37□□□□□ -0.11
PABPC1P4-201ENST00000539977 LAMC1P11047 1609 aa14.37□□□□□ -0.11
PABPC1P4-201ENST00000539977 ADGRB1O14514 1584 aa14.36□□□□□ -0.11
PABPC1P4-201ENST00000539977 HDGFP51858 240 aaKnown RBP14.36□□□□□ -0.11
PABPC1P4-201ENST00000539977 CNGB1Q14028 1251 aaPredicted RBP14.36□□□□□ -0.11
PABPC1P4-201ENST00000539977 THEMISQ8N1K5 641 aaPredicted RBP14.36□□□□□ -0.11
PABPC1P4-201ENST00000539977 TMF1P82094 1093 aa14.35□□□□□ -0.11
PABPC1P4-201ENST00000539977 EIF3AQ14152 1382 aaKnown RBP14.35□□□□□ -0.11
PABPC1P4-201ENST00000539977 KIAA1210Q9ULL0 1709 aa14.34□□□□□ -0.11
PABPC1P4-201ENST00000539977 EID1Q9Y6B2 187 aa14.34□□□□□ -0.11
PABPC1P4-201ENST00000539977 CENPJQ9HC77 1338 aaPredicted RBP14.34□□□□□ -0.11
PABPC1P4-201ENST00000539977 UBR1Q8IWV7 1749 aa14.33□□□□□ -0.11
PABPC1P4-201ENST00000539977 SLC26A8Q96RN1 970 aa14.33□□□□□ -0.11
PABPC1P4-201ENST00000539977 IQGAP1P46940 1657 aa14.33□□□□□ -0.12
PABPC1P4-201ENST00000539977 PTPRMP28827 1452 aa14.33□□□□□ -0.12
PABPC1P4-201ENST00000539977 ASXL1Q8IXJ9 1541 aa14.33□□□□□ -0.12
PABPC1P4-201ENST00000539977 ALKQ9UM73 1620 aa14.33□□□□□ -0.12
PABPC1P4-201ENST00000539977 SETBP1Q9Y6X0 1596 aa14.32□□□□□ -0.12
PABPC1P4-201ENST00000539977 METP08581 1390 aa14.32□□□□□ -0.12
PABPC1P4-201ENST00000539977 ANP32CO43423 234 aa14.31□□□□□ -0.12
PABPC1P4-201ENST00000539977 PRAM1Q96QH2 718 aa14.31□□□□□ -0.12
PABPC1P4-201ENST00000539977 YTHDC2Q9H6S0 1430 aaKnown RBP14.3□□□□□ -0.12
PABPC1P4-201ENST00000539977 MYO3AQ8NEV4 1616 aa14.3□□□□□ -0.12
PABPC1P4-201ENST00000539977 KDM4FA0A1W2PPD8 638 aa14.29□□□□□ -0.12
PABPC1P4-201ENST00000539977 WAPLQ7Z5K2 1190 aa14.29□□□□□ -0.12
PABPC1P4-201ENST00000539977 POGKQ9P215 609 aa14.29□□□□□ -0.12
PABPC1P4-201ENST00000539977 CEP170BQ9Y4F5 1589 aaPredicted RBP14.28□□□□□ -0.12
PABPC1P4-201ENST00000539977 PLEKHG1Q9ULL1 1385 aa14.28□□□□□ -0.12
PABPC1P4-201ENST00000539977 ARHGAP23Q9P227 1491 aa14.27□□□□□ -0.12
PABPC1P4-201ENST00000539977 MINK1Q8N4C8 1332 aaPredicted RBP14.27□□□□□ -0.12
PABPC1P4-201ENST00000539977 ADAMTS13Q76LX8 1427 aa14.27□□□□□ -0.13
PABPC1P4-201ENST00000539977 SLIT1O75093 1534 aa14.26□□□□□ -0.13
PABPC1P4-201ENST00000539977 NRXN3Q9Y4C0 1643 aa14.26□□□□□ -0.13
PABPC1P4-201ENST00000539977 KDM5AP29375 1690 aaKnown RBP14.26□□□□□ -0.13
PABPC1P4-201ENST00000539977 ANKLE2Q86XL3 938 aa14.25□□□□□ -0.13
PABPC1P4-201ENST00000539977 YTHDC1Q96MU7 727 aaKnown RBP14.25□□□□□ -0.13
PABPC1P4-201ENST00000539977 PANK3Q9H999 370 aa14.25□□□□□ -0.13
PABPC1P4-201ENST00000539977 LRPPRCP42704 1394 aaKnown RBP14.25□□□□□ -0.13
PABPC1P4-201ENST00000539977 PLEKHH1Q9ULM0 1364 aa14.25□□□□□ -0.13
PABPC1P4-201ENST00000539977 CDCA8Q53HL2 280 aa14.25□□□□□ -0.13
PABPC1P4-201ENST00000539977 CABP2Q9NPB3 220 aa14.24□□□□□ -0.13
PABPC1P4-201ENST00000539977 ABCC11Q96J66 1382 aa14.23□□□□□ -0.13
PABPC1P4-201ENST00000539977 SBNO2Q9Y2G9 1366 aa14.23□□□□□ -0.13
PABPC1P4-201ENST00000539977 POLR1AO95602 1720 aaPredicted RBP14.22□□□□□ -0.13
PABPC1P4-201ENST00000539977 TMC1Q8TDI8 760 aa14.22□□□□□ -0.13
PABPC1P4-201ENST00000539977 PRKRIP1Q9H875 184 aaPredicted RBP14.22□□□□□ -0.13
PABPC1P4-201ENST00000539977 NCKAP5LQ9HCH0 1330 aa14.22□□□□□ -0.13
PABPC1P4-201ENST00000539977 EVC2Q86UK5 1308 aa14.21□□□□□ -0.13
PABPC1P4-201ENST00000539977 SLC24A1O60721 1099 aa14.21□□□□□ -0.13
PABPC1P4-201ENST00000539977 TBX22Q9Y458 520 aa14.21□□□□□ -0.13
PABPC1P4-201ENST00000539977 PER1O15534 1290 aaPredicted RBP14.21□□□□□ -0.14
PABPC1P4-201ENST00000539977 SRPK2P78362 688 aaKnown RBP14.21□□□□□ -0.14
PABPC1P4-201ENST00000539977 AMOTL2Q9Y2J4 779 aa14.21□□□□□ -0.14
PABPC1P4-201ENST00000539977 PTPRUQ92729 1446 aa14.2□□□□□ -0.14
PABPC1P4-201ENST00000539977 ROBO2Q9HCK4 1378 aa14.2□□□□□ -0.14
PABPC1P4-201ENST00000539977 SETD1AO15047 1707 aaKnown RBP14.2□□□□□ -0.14
PABPC1P4-201ENST00000539977 ARHGEF28Q8N1W1 1705 aaKnown RBP14.2□□□□□ -0.14
PABPC1P4-201ENST00000539977 HSPA2P54652 639 aa14.2□□□□□ -0.14
PABPC1P4-201ENST00000539977 SLC12A5Q9H2X9 1139 aa14.2□□□□□ -0.14
PABPC1P4-201ENST00000539977 MED14O60244 1454 aa14.2□□□□□ -0.14
PABPC1P4-201ENST00000539977 QRICH2Q9H0J4 1663 aa14.19□□□□□ -0.14
PABPC1P4-201ENST00000539977 CDK19Q9BWU1 502 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms