RNA–Protein interactions for RNA: ENST00000539935.6

CACNB4-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene CACNB4, Length 8,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-210ENST00000539935 NEXNQ0ZGT2 675 aa15.61■□□□□ 0.09
CACNB4-210ENST00000539935 NAP1L1P55209 391 aaKnown RBP15.61■□□□□ 0.09
CACNB4-210ENST00000539935 ACBD3Q9H3P7 528 aa15.61■□□□□ 0.09
CACNB4-210ENST00000539935 ZKSCAN1P17029 563 aaPredicted RBP15.6■□□□□ 0.09
CACNB4-210ENST00000539935 TSHZ2Q9NRE2 1034 aa15.6■□□□□ 0.09
CACNB4-210ENST00000539935 CARMIL2Q6F5E8 1435 aa15.6■□□□□ 0.09
CACNB4-210ENST00000539935 KIF15Q9NS87 1388 aa15.59■□□□□ 0.09
CACNB4-210ENST00000539935 HSP90B2PQ58FF3 399 aa15.59■□□□□ 0.09
CACNB4-210ENST00000539935 PAF1Q8N7H5 531 aa15.59■□□□□ 0.09
CACNB4-210ENST00000539935 LTV1Q96GA3 475 aaPredicted RBP15.59■□□□□ 0.09
CACNB4-210ENST00000539935 CTDP1Q9Y5B0 961 aaPredicted RBP15.59■□□□□ 0.09
CACNB4-210ENST00000539935 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.58■□□□□ 0.09
CACNB4-210ENST00000539935 HSP90AB2PQ58FF8 381 aa15.58■□□□□ 0.08
CACNB4-210ENST00000539935 ZFYVE27Q5T4F4 411 aa15.58■□□□□ 0.08
CACNB4-210ENST00000539935 CPLX1O14810 134 aa15.58■□□□□ 0.08
CACNB4-210ENST00000539935 CWC15Q9P013 229 aaKnown RBP15.57■□□□□ 0.08
CACNB4-210ENST00000539935 C1orf141Q5JVX7 400 aa15.57■□□□□ 0.08
CACNB4-210ENST00000539935 RAB3GAP2Q9H2M9 1393 aa15.57■□□□□ 0.08
CACNB4-210ENST00000539935 VPS8Q8N3P4 1428 aa15.56■□□□□ 0.08
CACNB4-210ENST00000539935 SOGA1O94964 1423 aa15.56■□□□□ 0.08
CACNB4-210ENST00000539935 ARGLU1Q9NWB6 273 aaPredicted RBP15.55■□□□□ 0.08
CACNB4-210ENST00000539935 RAD21O60216 631 aa15.55■□□□□ 0.08
CACNB4-210ENST00000539935 TRDNQ13061 729 aa15.55■□□□□ 0.08
CACNB4-210ENST00000539935 DYDC1Q8WWB3 177 aa15.55■□□□□ 0.08
CACNB4-210ENST00000539935 FAM13BQ9NYF5 915 aa15.55■□□□□ 0.08
CACNB4-210ENST00000539935 FMN1Q68DA7 1419 aa15.55■□□□□ 0.08
CACNB4-210ENST00000539935 RNF20Q5VTR2 975 aa15.55■□□□□ 0.08
CACNB4-210ENST00000539935 ZKSCAN2Q63HK3 967 aa15.55■□□□□ 0.08
CACNB4-210ENST00000539935 BICD2Q8TD16 824 aa15.55■□□□□ 0.08
CACNB4-210ENST00000539935 C9orf78Q9NZ63 289 aaPredicted RBP15.55■□□□□ 0.08
CACNB4-210ENST00000539935 CCDC173Q0VFZ6 552 aa15.55■□□□□ 0.08
CACNB4-210ENST00000539935 CCDC43Q96MW1 224 aaKnown RBP15.55■□□□□ 0.08
CACNB4-210ENST00000539935 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.54■□□□□ 0.08
CACNB4-210ENST00000539935 EFCAB2Q5VUJ9 269 aa15.54■□□□□ 0.08
CACNB4-210ENST00000539935 PDE4AP27815 886 aa15.54■□□□□ 0.08
CACNB4-210ENST00000539935 MYBBP1AQ9BQG0 1328 aaKnown RBP15.53■□□□□ 0.08
CACNB4-210ENST00000539935 E9PSI1 815 aa15.53■□□□□ 0.08
CACNB4-210ENST00000539935 SASS6Q6UVJ0 657 aa15.53■□□□□ 0.08
CACNB4-210ENST00000539935 VPS37DQ86XT2 251 aa15.52■□□□□ 0.08
CACNB4-210ENST00000539935 ANO2Q9NQ90 1003 aa15.52■□□□□ 0.08
CACNB4-210ENST00000539935 CGNL1Q0VF96 1302 aa15.52■□□□□ 0.07
CACNB4-210ENST00000539935 MYO6Q9UM54 1294 aa15.52■□□□□ 0.07
CACNB4-210ENST00000539935 RRP7AQ9Y3A4 280 aaKnown RBP15.52■□□□□ 0.07
CACNB4-210ENST00000539935 ROCK1Q13464 1354 aa15.52■□□□□ 0.07
CACNB4-210ENST00000539935 ERICH2A1L162 156 aa15.52■□□□□ 0.07
CACNB4-210ENST00000539935 NEFHP12036 1026 aa15.52■□□□□ 0.07
CACNB4-210ENST00000539935 SKIDA1Q1XH10 827 aa15.51■□□□□ 0.07
CACNB4-210ENST00000539935 DHX16O60231 1041 aaKnown RBP15.51■□□□□ 0.07
CACNB4-210ENST00000539935 R3HCC1Q9Y3T6 440 aaKnown RBP15.51■□□□□ 0.07
CACNB4-210ENST00000539935 TEFQ10587 303 aa15.51■□□□□ 0.07
CACNB4-210ENST00000539935 TSPYL1Q9H0U9 437 aa15.5■□□□□ 0.07
CACNB4-210ENST00000539935 IFIT2P09913 472 aaKnown RBP15.5■□□□□ 0.07
CACNB4-210ENST00000539935 KIF3BO15066 747 aa15.5■□□□□ 0.07
CACNB4-210ENST00000539935 MNS1Q8NEH6 495 aa15.5■□□□□ 0.07
CACNB4-210ENST00000539935 CWC22Q9HCG8 908 aaKnown RBP15.5■□□□□ 0.07
CACNB4-210ENST00000539935 TTC5Q8N0Z6 440 aa15.5■□□□□ 0.07
CACNB4-210ENST00000539935 BCL2L13Q9BXK5 485 aa15.49■□□□□ 0.07
CACNB4-210ENST00000539935 NFXL1Q6ZNB6 911 aa15.49■□□□□ 0.07
CACNB4-210ENST00000539935 SAFBQ15424 915 aaKnown RBP eCLIP15.49■□□□□ 0.07
CACNB4-210ENST00000539935 WASHC2CQ9Y4E1 1318 aa15.49■□□□□ 0.07
CACNB4-210ENST00000539935 EPS15P42566 896 aa15.49■□□□□ 0.07
CACNB4-210ENST00000539935 DDX19BQ9UMR2 479 aa15.49■□□□□ 0.07
CACNB4-210ENST00000539935 NAT10Q9H0A0 1025 aaKnown RBP15.48■□□□□ 0.07
CACNB4-210ENST00000539935 IFT57Q9NWB7 429 aa15.48■□□□□ 0.07
CACNB4-210ENST00000539935 CADPSQ9ULU8 1353 aa15.48■□□□□ 0.07
CACNB4-210ENST00000539935 COG3Q96JB2 828 aa15.48■□□□□ 0.07
CACNB4-210ENST00000539935 ATAD2BQ9ULI0 1458 aa15.48■□□□□ 0.07
CACNB4-210ENST00000539935 ANKRD62A6NC57 917 aa15.48■□□□□ 0.07
CACNB4-210ENST00000539935 EVA1CP58658 441 aa15.48■□□□□ 0.07
CACNB4-210ENST00000539935 UACAQ9BZF9 1416 aa15.48■□□□□ 0.07
CACNB4-210ENST00000539935 ELL2O00472 640 aaPredicted RBP15.48■□□□□ 0.07
CACNB4-210ENST00000539935 SLC4A3P48751 1232 aa15.48■□□□□ 0.07
CACNB4-210ENST00000539935 SEPT11Q9NVA2 429 aaKnown RBP15.47■□□□□ 0.07
CACNB4-210ENST00000539935 FAM43AQ8N2R8 423 aa15.47■□□□□ 0.07
CACNB4-210ENST00000539935 BCCIPQ9P287 314 aaKnown RBP eCLIP15.47■□□□□ 0.07
CACNB4-210ENST00000539935 NUCB2P80303 420 aa15.47■□□□□ 0.07
CACNB4-210ENST00000539935 CCDC73Q6ZRK6 1079 aa15.47■□□□□ 0.07
CACNB4-210ENST00000539935 CAGE1Q8TC20 777 aa15.47■□□□□ 0.07
CACNB4-210ENST00000539935 SMC3Q9UQE7 1217 aa15.46■□□□□ 0.07
CACNB4-210ENST00000539935 RRP1P56182 461 aaKnown RBP15.46■□□□□ 0.07
CACNB4-210ENST00000539935 INCENPQ9NQS7 918 aa15.46■□□□□ 0.07
CACNB4-210ENST00000539935 CHMP5Q9NZZ3 219 aa15.46■□□□□ 0.07
CACNB4-210ENST00000539935 CLASRPQ8N2M8 674 aaKnown RBP15.46■□□□□ 0.07
CACNB4-210ENST00000539935 NUTM2FA1L443 756 aa15.46■□□□□ 0.07
CACNB4-210ENST00000539935 L3MBTL2Q969R5 705 aa15.46■□□□□ 0.07
CACNB4-210ENST00000539935 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.46■□□□□ 0.06
CACNB4-210ENST00000539935 DDX58O95786 925 aaKnown RBP15.46■□□□□ 0.06
CACNB4-210ENST00000539935 VPS37CA5D8V6 355 aaPredicted RBP15.45■□□□□ 0.06
CACNB4-210ENST00000539935 CCDC97Q96F63 343 aaPredicted RBP15.45■□□□□ 0.06
CACNB4-210ENST00000539935 SEPT7Q16181 437 aaKnown RBP15.45■□□□□ 0.06
CACNB4-210ENST00000539935 RSPH4AQ5TD94 716 aa15.45■□□□□ 0.06
CACNB4-210ENST00000539935 CCDC18Q5T9S5 1454 aa15.45■□□□□ 0.06
CACNB4-210ENST00000539935 BCL11BQ9C0K0 894 aaPredicted RBP15.45■□□□□ 0.06
CACNB4-210ENST00000539935 OFD1O75665 1012 aa15.44■□□□□ 0.06
CACNB4-210ENST00000539935 OLFM4Q6UX06 510 aa15.44■□□□□ 0.06
CACNB4-210ENST00000539935 NUTM2DQ5VT03 806 aaPredicted RBP15.44■□□□□ 0.06
CACNB4-210ENST00000539935 TRAK1Q9UPV9 953 aa15.44■□□□□ 0.06
CACNB4-210ENST00000539935 INTS3Q68E01 1043 aaKnown RBP15.44■□□□□ 0.06
CACNB4-210ENST00000539935 NGEFQ8N5V2 710 aa15.44■□□□□ 0.06
CACNB4-210ENST00000539935 G3BP1Q13283 466 aaKnown RBP eCLIP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms