RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 CFAP65Q6ZU64 1925 aaKnown RBP13.35□□□□□ -0.27
RTN4IP1-204ENST00000539449 TNRQ92752 1358 aa13.33□□□□□ -0.27
RTN4IP1-204ENST00000539449 XIRP1Q702N8 1843 aaKnown RBP13.33□□□□□ -0.28
RTN4IP1-204ENST00000539449 KANK1Q14678 1352 aa13.32□□□□□ -0.28
RTN4IP1-204ENST00000539449 THEMISQ8N1K5 641 aaPredicted RBP13.32□□□□□ -0.28
RTN4IP1-204ENST00000539449 FAM135BQ49AJ0 1406 aa13.31□□□□□ -0.28
RTN4IP1-204ENST00000539449 ABCC3O15438 1527 aa13.31□□□□□ -0.28
RTN4IP1-204ENST00000539449 LMTK2Q8IWU2 1503 aa13.31□□□□□ -0.28
RTN4IP1-204ENST00000539449 FBXO31Q5XUX0 539 aaPredicted RBP13.31□□□□□ -0.28
RTN4IP1-204ENST00000539449 SPHKAPQ2M3C7 1700 aa13.3□□□□□ -0.28
RTN4IP1-204ENST00000539449 RPRD2Q5VT52 1461 aaKnown RBP13.29□□□□□ -0.28
RTN4IP1-204ENST00000539449 EFCAB6Q5THR3 1501 aa13.29□□□□□ -0.28
RTN4IP1-204ENST00000539449 UGGT1Q9NYU2 1555 aa13.29□□□□□ -0.28
RTN4IP1-204ENST00000539449 ZC3H13Q5T200 1668 aaKnown RBP13.28□□□□□ -0.28
RTN4IP1-204ENST00000539449 WASHC2CQ9Y4E1 1318 aa13.27□□□□□ -0.29
RTN4IP1-204ENST00000539449 ROBO1Q9Y6N7 1651 aa13.27□□□□□ -0.29
RTN4IP1-204ENST00000539449 PPP1R15AO75807 674 aaPredicted RBP13.26□□□□□ -0.29
RTN4IP1-204ENST00000539449 L3MBTL2Q969R5 705 aa13.26□□□□□ -0.29
RTN4IP1-204ENST00000539449 TONSLQ96HA7 1378 aa13.26□□□□□ -0.29
RTN4IP1-204ENST00000539449 CLTCL1P53675 1640 aa13.25□□□□□ -0.29
RTN4IP1-204ENST00000539449 NLRP1Q9C000 1473 aa13.25□□□□□ -0.29
RTN4IP1-204ENST00000539449 TIMELESSQ9UNS1 1208 aa13.24□□□□□ -0.29
RTN4IP1-204ENST00000539449 TRPM2O94759 1503 aa13.23□□□□□ -0.29
RTN4IP1-204ENST00000539449 CCDC144AA2RUR9 1427 aa13.22□□□□□ -0.29
RTN4IP1-204ENST00000539449 PHLPP1O60346 1717 aa13.21□□□□□ -0.3
RTN4IP1-204ENST00000539449 ARHGAP31Q2M1Z3 1444 aa13.21□□□□□ -0.3
RTN4IP1-204ENST00000539449 ZNF772Q68DY9 489 aaPredicted RBP13.2□□□□□ -0.3
RTN4IP1-204ENST00000539449 JCADQ9P266 1359 aa13.2□□□□□ -0.3
RTN4IP1-204ENST00000539449 NBPF8Q3BBV2 869 aa13.19□□□□□ -0.3
RTN4IP1-204ENST00000539449 NOS1P29475 1434 aa13.19□□□□□ -0.3
RTN4IP1-204ENST00000539449 KIF1BO60333 1816 aa13.18□□□□□ -0.3
RTN4IP1-204ENST00000539449 RGL3Q3MIN7 710 aa13.18□□□□□ -0.3
RTN4IP1-204ENST00000539449 SPATA31E1Q6ZUB1 1445 aa13.18□□□□□ -0.3
RTN4IP1-204ENST00000539449 LRP6O75581 1613 aa13.17□□□□□ -0.3
RTN4IP1-204ENST00000539449 RXRBP28702 533 aa13.17□□□□□ -0.3
RTN4IP1-204ENST00000539449 PIK3C2BO00750 1634 aa13.17□□□□□ -0.3
RTN4IP1-204ENST00000539449 CDK12Q9NYV4 1490 aaPredicted RBP13.16□□□□□ -0.3
RTN4IP1-204ENST00000539449 MYO5BQ9ULV0 1848 aa13.16□□□□□ -0.3
RTN4IP1-204ENST00000539449 MEX3CQ5U5Q3 659 aaKnown RBP13.15□□□□□ -0.3
RTN4IP1-204ENST00000539449 TMEM94Q12767 1356 aa13.15□□□□□ -0.3
RTN4IP1-204ENST00000539449 ERVK-7P63135 1459 aa13.15□□□□□ -0.3
RTN4IP1-204ENST00000539449 SCAF11Q99590 1463 aaKnown RBP13.15□□□□□ -0.3
RTN4IP1-204ENST00000539449 KDM2AQ9Y2K7 1162 aa13.14□□□□□ -0.31
RTN4IP1-204ENST00000539449 UBR1Q8IWV7 1749 aa13.13□□□□□ -0.31
RTN4IP1-204ENST00000539449 DCAF11Q8TEB1 546 aa13.13□□□□□ -0.31
RTN4IP1-204ENST00000539449 COL16A1Q07092 1604 aaPredicted RBP13.13□□□□□ -0.31
RTN4IP1-204ENST00000539449 IDI1Q13907 227 aa13.12□□□□□ -0.31
RTN4IP1-204ENST00000539449 IFT172Q9UG01 1749 aa13.12□□□□□ -0.31
RTN4IP1-204ENST00000539449 ADGRB3O60242 1522 aa13.12□□□□□ -0.31
RTN4IP1-204ENST00000539449 SPATA31A6Q5VVP1 1343 aa13.12□□□□□ -0.31
RTN4IP1-204ENST00000539449 LTKP29376 864 aa13.11□□□□□ -0.31
RTN4IP1-204ENST00000539449 CHGAP10645 457 aaKnown RBP13.1□□□□□ -0.31
RTN4IP1-204ENST00000539449 ZNF326Q5BKZ1 582 aaKnown RBP13.1□□□□□ -0.31
RTN4IP1-204ENST00000539449 SETBP1Q9Y6X0 1596 aa13.1□□□□□ -0.31
RTN4IP1-204ENST00000539449 PPLO60437 1756 aa13.09□□□□□ -0.31
RTN4IP1-204ENST00000539449 TXNDC2Q86VQ3 553 aa13.09□□□□□ -0.31
RTN4IP1-204ENST00000539449 RBM33Q96EV2 1170 aaKnown RBP13.09□□□□□ -0.31
RTN4IP1-204ENST00000539449 ZRANB1Q9UGI0 708 aa13.09□□□□□ -0.31
RTN4IP1-204ENST00000539449 TMEM131LA2VDJ0 1609 aa13.09□□□□□ -0.31
RTN4IP1-204ENST00000539449 ARHGAP23Q9P227 1491 aa13.09□□□□□ -0.31
RTN4IP1-204ENST00000539449 SLIT1O75093 1534 aa13.08□□□□□ -0.31
RTN4IP1-204ENST00000539449 ZNF316A6NFI3 1004 aaPredicted RBP13.08□□□□□ -0.32
RTN4IP1-204ENST00000539449 SLAIN2Q9P270 581 aa13.08□□□□□ -0.32
RTN4IP1-204ENST00000539449 SHPRHQ149N8 1683 aa13.08□□□□□ -0.32
RTN4IP1-204ENST00000539449 RGS12O14924 1447 aa13.07□□□□□ -0.32
RTN4IP1-204ENST00000539449 PRAG1Q86YV5 1406 aa13.07□□□□□ -0.32
RTN4IP1-204ENST00000539449 TRPM1Q7Z4N2 1603 aa13.07□□□□□ -0.32
RTN4IP1-204ENST00000539449 PROSER2Q86WR7 435 aaPredicted RBP13.07□□□□□ -0.32
RTN4IP1-204ENST00000539449 HIRIP3Q9BW71 556 aaPredicted RBP13.07□□□□□ -0.32
RTN4IP1-204ENST00000539449 KCNA6P17658 529 aa13.06□□□□□ -0.32
RTN4IP1-204ENST00000539449 SLC52A1Q9NWF4 448 aa13.06□□□□□ -0.32
RTN4IP1-204ENST00000539449 ADGRF5Q8IZF2 1346 aa13.05□□□□□ -0.32
RTN4IP1-204ENST00000539449 MSH6P52701 1360 aa13.05□□□□□ -0.32
RTN4IP1-204ENST00000539449 RALGAPBQ86X10 1494 aa13.04□□□□□ -0.32
RTN4IP1-204ENST00000539449 NEXMIFQ5QGS0 1516 aa13.04□□□□□ -0.32
RTN4IP1-204ENST00000539449 NUTM2BA6NNL0 878 aaPredicted RBP13.04□□□□□ -0.32
RTN4IP1-204ENST00000539449 NUTM2EB1AL46 878 aaPredicted RBP13.04□□□□□ -0.32
RTN4IP1-204ENST00000539449 NBPF1Q3BBV0 1214 aa13.04□□□□□ -0.32
RTN4IP1-204ENST00000539449 NUTM2DQ5VT03 806 aaPredicted RBP13.04□□□□□ -0.32
RTN4IP1-204ENST00000539449 NUTM2AQ8IVF1 878 aaPredicted RBP13.04□□□□□ -0.32
RTN4IP1-204ENST00000539449 PPP4R3CPQ6ZMV5 832 aa13.03□□□□□ -0.32
RTN4IP1-204ENST00000539449 EID1Q9Y6B2 187 aa13.03□□□□□ -0.32
RTN4IP1-204ENST00000539449 AFF2P51816 1311 aa13.03□□□□□ -0.32
RTN4IP1-204ENST00000539449 HSPA5P11021 654 aaKnown RBP13.02□□□□□ -0.33
RTN4IP1-204ENST00000539449 MYOM2P54296 1465 aa13.02□□□□□ -0.33
RTN4IP1-204ENST00000539449 NKTRP30414 1462 aaKnown RBP13.01□□□□□ -0.33
RTN4IP1-204ENST00000539449 AHDC1Q5TGY3 1603 aaPredicted RBP13□□□□□ -0.33
RTN4IP1-204ENST00000539449 NWD1Q149M9 1564 aa13□□□□□ -0.33
RTN4IP1-204ENST00000539449 NRXN1Q9ULB1 1477 aa13□□□□□ -0.33
RTN4IP1-204ENST00000539449 ATAD2Q6PL18 1390 aa13□□□□□ -0.33
RTN4IP1-204ENST00000539449 RPGRIP1LQ68CZ1 1315 aa13□□□□□ -0.33
RTN4IP1-204ENST00000539449 RBM6P78332 1123 aaKnown RBP13□□□□□ -0.33
RTN4IP1-204ENST00000539449 KDM5AP29375 1690 aaKnown RBP12.99□□□□□ -0.33
RTN4IP1-204ENST00000539449 KIAA1210Q9ULL0 1709 aa12.99□□□□□ -0.33
RTN4IP1-204ENST00000539449 CFAP70Q5T0N1 1121 aa12.98□□□□□ -0.33
RTN4IP1-204ENST00000539449 SLC26A8Q96RN1 970 aa12.98□□□□□ -0.33
RTN4IP1-204ENST00000539449 STAG3Q9UJ98 1225 aa12.98□□□□□ -0.33
RTN4IP1-204ENST00000539449 TMEM2Q9UHN6 1383 aa12.97□□□□□ -0.33
RTN4IP1-204ENST00000539449 STAC3Q96MF2 364 aa12.97□□□□□ -0.33
RTN4IP1-204ENST00000539449 CARD11Q9BXL7 1154 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms