RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 CABP2Q9NPB3 220 aa12.05□□□□□ -0.48
GGA3-202ENST00000538886 NBPF8Q3BBV2 869 aa12.05□□□□□ -0.48
GGA3-202ENST00000538886 RIMS2Q9UQ26 1411 aa12.05□□□□□ -0.48
GGA3-202ENST00000538886 ANKRD30BQ9BXX2 1392 aa12.04□□□□□ -0.48
GGA3-202ENST00000538886 ABCA6Q8N139 1617 aa12.04□□□□□ -0.48
GGA3-202ENST00000538886 PSME1Q06323 249 aa12.04□□□□□ -0.48
GGA3-202ENST00000538886 ADGRL2O95490 1459 aa12.04□□□□□ -0.48
GGA3-202ENST00000538886 CCDC9Q9Y3X0 531 aaKnown RBP12.03□□□□□ -0.48
GGA3-202ENST00000538886 HSPA5P11021 654 aaKnown RBP12.03□□□□□ -0.48
GGA3-202ENST00000538886 LMTK3Q96Q04 1460 aa12.03□□□□□ -0.48
GGA3-202ENST00000538886 KIDINS220Q9ULH0 1771 aa12.03□□□□□ -0.48
GGA3-202ENST00000538886 UGGT1Q9NYU2 1555 aa12.02□□□□□ -0.48
GGA3-202ENST00000538886 FOXO3O43524 673 aa12.02□□□□□ -0.48
GGA3-202ENST00000538886 ARHGEF40Q8TER5 1519 aa12.02□□□□□ -0.48
GGA3-202ENST00000538886 TMF1P82094 1093 aa12.02□□□□□ -0.49
GGA3-202ENST00000538886 TMEM2Q9UHN6 1383 aa12.01□□□□□ -0.49
GGA3-202ENST00000538886 RPGRIP1LQ68CZ1 1315 aa12.01□□□□□ -0.49
GGA3-202ENST00000538886 TOM1O60784 492 aa12.01□□□□□ -0.49
GGA3-202ENST00000538886 MEX3CQ5U5Q3 659 aaKnown RBP12□□□□□ -0.49
GGA3-202ENST00000538886 CENPJQ9HC77 1338 aaPredicted RBP12□□□□□ -0.49
GGA3-202ENST00000538886 KDM5DQ9BY66 1539 aa12□□□□□ -0.49
GGA3-202ENST00000538886 SENP3-EIF4A1A0A087X0R7 540 aa11.99□□□□□ -0.49
GGA3-202ENST00000538886 RIMS1Q86UR5 1692 aaKnown RBP11.99□□□□□ -0.49
GGA3-202ENST00000538886 KDM5CP41229 1560 aa11.99□□□□□ -0.49
GGA3-202ENST00000538886 MADDQ8WXG6 1647 aa11.99□□□□□ -0.49
GGA3-202ENST00000538886 PZPP20742 1482 aa11.98□□□□□ -0.49
GGA3-202ENST00000538886 CLSPNQ9HAW4 1339 aa11.98□□□□□ -0.49
GGA3-202ENST00000538886 ABCC3O15438 1527 aa11.98□□□□□ -0.49
GGA3-202ENST00000538886 CC2D1BQ5T0F9 858 aaKnown RBP11.97□□□□□ -0.49
GGA3-202ENST00000538886 DDX17Q92841 729 aaKnown RBP11.97□□□□□ -0.49
GGA3-202ENST00000538886 PPRC1Q5VV67 1664 aaKnown RBP11.97□□□□□ -0.49
GGA3-202ENST00000538886 ERVK-7P63135 1459 aa11.97□□□□□ -0.49
GGA3-202ENST00000538886 CDCA8Q53HL2 280 aa11.96□□□□□ -0.49
GGA3-202ENST00000538886 RICTORQ6R327 1708 aa11.96□□□□□ -0.49
GGA3-202ENST00000538886 CDK19Q9BWU1 502 aa11.96□□□□□ -0.49
GGA3-202ENST00000538886 PRDM15P57071 1507 aaPredicted RBP11.96□□□□□ -0.5
GGA3-202ENST00000538886 FRMPD1Q5SYB0 1578 aa11.95□□□□□ -0.5
GGA3-202ENST00000538886 ZNF316A6NFI3 1004 aaPredicted RBP11.95□□□□□ -0.5
GGA3-202ENST00000538886 KNSTRNQ9Y448 316 aa11.95□□□□□ -0.5
GGA3-202ENST00000538886 TBX22Q9Y458 520 aa11.95□□□□□ -0.5
GGA3-202ENST00000538886 ADAMTS2O95450 1211 aa11.95□□□□□ -0.5
GGA3-202ENST00000538886 HDGFL2Q7Z4V5 671 aaPredicted RBP11.95□□□□□ -0.5
GGA3-202ENST00000538886 LTV1Q96GA3 475 aaPredicted RBP11.95□□□□□ -0.5
GGA3-202ENST00000538886 PHF23Q9BUL5 403 aaPredicted RBP11.95□□□□□ -0.5
GGA3-202ENST00000538886 EVC2Q86UK5 1308 aa11.95□□□□□ -0.5
GGA3-202ENST00000538886 CLTCQ00610 1675 aaKnown RBP11.94□□□□□ -0.5
GGA3-202ENST00000538886 C14orf93Q9H972 538 aaKnown RBP11.94□□□□□ -0.5
GGA3-202ENST00000538886 USP35Q9P2H5 1018 aa11.94□□□□□ -0.5
GGA3-202ENST00000538886 TIMELESSQ9UNS1 1208 aa11.94□□□□□ -0.5
GGA3-202ENST00000538886 CADPS2Q86UW7 1296 aa11.94□□□□□ -0.5
GGA3-202ENST00000538886 CABP1Q9NZU7 370 aa11.94□□□□□ -0.5
GGA3-202ENST00000538886 INO80Q9ULG1 1556 aaPredicted RBP11.94□□□□□ -0.5
GGA3-202ENST00000538886 ZMYM4Q5VZL5 1548 aa11.94□□□□□ -0.5
GGA3-202ENST00000538886 CSB-PGBD3P0DP91 1061 aa11.93□□□□□ -0.5
GGA3-202ENST00000538886 MSH6P52701 1360 aa11.93□□□□□ -0.5
GGA3-202ENST00000538886 NPHP4O75161 1426 aaPredicted RBP11.93□□□□□ -0.5
GGA3-202ENST00000538886 EIF3AQ14152 1382 aaKnown RBP11.93□□□□□ -0.5
GGA3-202ENST00000538886 SLC12A5Q9H2X9 1139 aa11.92□□□□□ -0.5
GGA3-202ENST00000538886 C19orf44Q9H6X5 657 aa11.92□□□□□ -0.5
GGA3-202ENST00000538886 MAST1Q9Y2H9 1570 aa11.92□□□□□ -0.5
GGA3-202ENST00000538886 ORAI2Q96SN7 254 aa11.92□□□□□ -0.5
GGA3-202ENST00000538886 USP47Q96K76 1375 aa11.92□□□□□ -0.5
GGA3-202ENST00000538886 ABTB2Q8N961 1025 aa11.91□□□□□ -0.5
GGA3-202ENST00000538886 STAC3Q96MF2 364 aa11.91□□□□□ -0.5
GGA3-202ENST00000538886 ADGBQ8N7X0 1667 aa11.91□□□□□ -0.5
GGA3-202ENST00000538886 TMEM94Q12767 1356 aa11.91□□□□□ -0.5
GGA3-202ENST00000538886 AGLP35573 1532 aa11.9□□□□□ -0.5
GGA3-202ENST00000538886 NLRP6P59044 892 aa11.9□□□□□ -0.5
GGA3-202ENST00000538886 NUDT16Q96DE0 195 aaKnown RBP11.9□□□□□ -0.5
GGA3-202ENST00000538886 SALL2Q9Y467 1007 aaPredicted RBP11.9□□□□□ -0.5
GGA3-202ENST00000538886 METP08581 1390 aa11.9□□□□□ -0.5
GGA3-202ENST00000538886 TERF2IPQ9NYB0 399 aa11.9□□□□□ -0.51
GGA3-202ENST00000538886 SLAIN2Q9P270 581 aa11.9□□□□□ -0.51
GGA3-202ENST00000538886 CERKQ8TCT0 537 aa11.89□□□□□ -0.51
GGA3-202ENST00000538886 ANP32CO43423 234 aa11.89□□□□□ -0.51
GGA3-202ENST00000538886 EFCAB6Q5THR3 1501 aa11.89□□□□□ -0.51
GGA3-202ENST00000538886 PLXNC1O60486 1568 aa11.89□□□□□ -0.51
GGA3-202ENST00000538886 SCAF11Q99590 1463 aaKnown RBP11.89□□□□□ -0.51
GGA3-202ENST00000538886 NLRP1Q9C000 1473 aa11.88□□□□□ -0.51
GGA3-202ENST00000538886 ZC3H6P61129 1189 aaKnown RBP11.88□□□□□ -0.51
GGA3-202ENST00000538886 CABLES1Q8TDN4 633 aa11.87□□□□□ -0.51
GGA3-202ENST00000538886 PHF8Q9UPP1 1060 aa11.87□□□□□ -0.51
GGA3-202ENST00000538886 A2ML1A8K2U0 1454 aa11.87□□□□□ -0.51
GGA3-202ENST00000538886 SETD1BQ9UPS6 1966 aaKnown RBP11.87□□□□□ -0.51
GGA3-202ENST00000538886 EVA1CP58658 441 aa11.87□□□□□ -0.51
GGA3-202ENST00000538886 CEP152O94986 1710 aa11.87□□□□□ -0.51
GGA3-202ENST00000538886 PLA2R1Q13018 1463 aa11.87□□□□□ -0.51
GGA3-202ENST00000538886 GGNBP2Q9H3C7 697 aa11.87□□□□□ -0.51
GGA3-202ENST00000538886 STRN4Q9NRL3 753 aa11.87□□□□□ -0.51
GGA3-202ENST00000538886 WASLO00401 505 aaPredicted RBP11.86□□□□□ -0.51
GGA3-202ENST00000538886 PANK3Q9H999 370 aa11.86□□□□□ -0.51
GGA3-202ENST00000538886 CCDC61Q9Y6R9 512 aa11.86□□□□□ -0.51
GGA3-202ENST00000538886 FER1L4A9Z1Z3 1794 aa11.86□□□□□ -0.51
GGA3-202ENST00000538886 RPRD2Q5VT52 1461 aaKnown RBP11.85□□□□□ -0.51
GGA3-202ENST00000538886 ARHGAP31Q2M1Z3 1444 aa11.85□□□□□ -0.51
GGA3-202ENST00000538886 MORC1Q86VD1 984 aa11.85□□□□□ -0.51
GGA3-202ENST00000538886 ANO8Q9HCE9 1232 aaPredicted RBP11.85□□□□□ -0.51
GGA3-202ENST00000538886 GPRASP1Q5JY77 1395 aa11.85□□□□□ -0.51
GGA3-202ENST00000538886 CAMSAP1Q5T5Y3 1602 aa11.85□□□□□ -0.51
GGA3-202ENST00000538886 KRT28Q7Z3Y7 464 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms