RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 FBLN1P23142 703 aa10.98□□□□□ -0.65
ABCA4-207ENST00000536513 ABCC1P33527 1531 aa10.97□□□□□ -0.65
ABCA4-207ENST00000536513 POGZQ7Z3K3 1410 aa10.96□□□□□ -0.65
ABCA4-207ENST00000536513 U2SURPO15042 1029 aaKnown RBP10.96□□□□□ -0.65
ABCA4-207ENST00000536513 SHANK2Q9UPX8 1470 aa10.96□□□□□ -0.65
ABCA4-207ENST00000536513 NUTM2GQ5VZR2 741 aa10.96□□□□□ -0.65
ABCA4-207ENST00000536513 CENPJQ9HC77 1338 aaPredicted RBP10.96□□□□□ -0.66
ABCA4-207ENST00000536513 GCC2Q8IWJ2 1684 aa10.96□□□□□ -0.66
ABCA4-207ENST00000536513 ZBTB22O15209 634 aa10.95□□□□□ -0.66
ABCA4-207ENST00000536513 TMEM132AQ24JP5 1023 aa10.95□□□□□ -0.66
ABCA4-207ENST00000536513 PLA2R1Q13018 1463 aa10.95□□□□□ -0.66
ABCA4-207ENST00000536513 DISP3Q9P2K9 1392 aa10.95□□□□□ -0.66
ABCA4-207ENST00000536513 PAK3O75914 559 aaPredicted RBP10.95□□□□□ -0.66
ABCA4-207ENST00000536513 MORC1Q86VD1 984 aa10.95□□□□□ -0.66
ABCA4-207ENST00000536513 GGNBP2Q9H3C7 697 aa10.95□□□□□ -0.66
ABCA4-207ENST00000536513 NCKAP5LQ9HCH0 1330 aa10.95□□□□□ -0.66
ABCA4-207ENST00000536513 DEKP35659 375 aaKnown RBP10.95□□□□□ -0.66
ABCA4-207ENST00000536513 RRP7AQ9Y3A4 280 aaKnown RBP10.94□□□□□ -0.66
ABCA4-207ENST00000536513 CDCA8Q53HL2 280 aa10.94□□□□□ -0.66
ABCA4-207ENST00000536513 EID1Q9Y6B2 187 aa10.94□□□□□ -0.66
ABCA4-207ENST00000536513 TEX14Q8IWB6 1497 aa10.94□□□□□ -0.66
ABCA4-207ENST00000536513 PMFBP1Q8TBY8 1022 aa10.93□□□□□ -0.66
ABCA4-207ENST00000536513 SLC52A1Q9NWF4 448 aa10.92□□□□□ -0.66
ABCA4-207ENST00000536513 NPATQ14207 1427 aa10.92□□□□□ -0.66
ABCA4-207ENST00000536513 KTN1Q86UP2 1357 aaKnown RBP10.91□□□□□ -0.66
ABCA4-207ENST00000536513 ARHGEF5Q12774 1597 aa10.91□□□□□ -0.66
ABCA4-207ENST00000536513 COL17A1Q9UMD9 1497 aaPredicted RBP10.91□□□□□ -0.66
ABCA4-207ENST00000536513 CNTLNQ9NXG0 1405 aa10.91□□□□□ -0.66
ABCA4-207ENST00000536513 ADGBQ8N7X0 1667 aa10.9□□□□□ -0.66
ABCA4-207ENST00000536513 CCER2I3L3R5 266 aa10.9□□□□□ -0.66
ABCA4-207ENST00000536513 HSPA2P54652 639 aa10.9□□□□□ -0.66
ABCA4-207ENST00000536513 CABP1Q9NZU7 370 aa10.9□□□□□ -0.66
ABCA4-207ENST00000536513 ZFYVE16Q7Z3T8 1539 aa10.9□□□□□ -0.66
ABCA4-207ENST00000536513 RTEL1-TNFRSF6BF6WH68 1400 aa10.9□□□□□ -0.67
ABCA4-207ENST00000536513 XPCQ01831 940 aaPredicted RBP10.89□□□□□ -0.67
ABCA4-207ENST00000536513 TESK2Q96S53 571 aa10.89□□□□□ -0.67
ABCA4-207ENST00000536513 PRAG1Q86YV5 1406 aa10.89□□□□□ -0.67
ABCA4-207ENST00000536513 CCDC136Q96JN2 1154 aa10.89□□□□□ -0.67
ABCA4-207ENST00000536513 LAS1LQ9Y4W2 734 aaKnown RBP10.88□□□□□ -0.67
ABCA4-207ENST00000536513 ZMYM3Q14202 1370 aa10.88□□□□□ -0.67
ABCA4-207ENST00000536513 ATP10AO60312 1499 aa10.88□□□□□ -0.67
ABCA4-207ENST00000536513 LTV1Q96GA3 475 aaPredicted RBP10.87□□□□□ -0.67
ABCA4-207ENST00000536513 HDGFP51858 240 aaKnown RBP10.87□□□□□ -0.67
ABCA4-207ENST00000536513 CDK19Q9BWU1 502 aa10.87□□□□□ -0.67
ABCA4-207ENST00000536513 EIF3AQ14152 1382 aaKnown RBP10.87□□□□□ -0.67
ABCA4-207ENST00000536513 U2AF1L5P0DN76 240 aaPredicted RBP10.87□□□□□ -0.67
ABCA4-207ENST00000536513 ANP32AP39687 249 aaKnown RBP10.87□□□□□ -0.67
ABCA4-207ENST00000536513 U2AF1Q01081 240 aaKnown RBP eCLIP10.87□□□□□ -0.67
ABCA4-207ENST00000536513 DNAJC5Q9H3Z4 198 aa10.87□□□□□ -0.67
ABCA4-207ENST00000536513 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.87□□□□□ -0.67
ABCA4-207ENST00000536513 NGDNQ8NEJ9 315 aaKnown RBP10.86□□□□□ -0.67
ABCA4-207ENST00000536513 EVC2Q86UK5 1308 aa10.86□□□□□ -0.67
ABCA4-207ENST00000536513 ABCA9Q8IUA7 1624 aa10.85□□□□□ -0.67
ABCA4-207ENST00000536513 NLRP13Q86W25 1043 aa10.85□□□□□ -0.67
ABCA4-207ENST00000536513 CDCA7LQ96GN5 454 aa10.85□□□□□ -0.67
ABCA4-207ENST00000536513 C14orf93Q9H972 538 aaKnown RBP10.85□□□□□ -0.67
ABCA4-207ENST00000536513 ADAMTS8Q9UP79 889 aa10.85□□□□□ -0.67
ABCA4-207ENST00000536513 PRDM15P57071 1507 aaPredicted RBP10.85□□□□□ -0.67
ABCA4-207ENST00000536513 MAST1Q9Y2H9 1570 aa10.85□□□□□ -0.67
ABCA4-207ENST00000536513 LTKP29376 864 aa10.84□□□□□ -0.67
ABCA4-207ENST00000536513 CANXP27824 592 aaKnown RBP10.84□□□□□ -0.67
ABCA4-207ENST00000536513 HDGFL2Q7Z4V5 671 aaPredicted RBP10.84□□□□□ -0.67
ABCA4-207ENST00000536513 NEO1Q92859 1461 aa10.83□□□□□ -0.67
ABCA4-207ENST00000536513 CROCC2H7BZ55 1655 aa10.83□□□□□ -0.68
ABCA4-207ENST00000536513 ADRA2BP18089 450 aa10.83□□□□□ -0.68
ABCA4-207ENST00000536513 MYBBP1AQ9BQG0 1328 aaKnown RBP10.83□□□□□ -0.68
ABCA4-207ENST00000536513 PLIN1O60240 522 aa10.83□□□□□ -0.68
ABCA4-207ENST00000536513 B4GALNT3Q6L9W6 998 aa10.83□□□□□ -0.68
ABCA4-207ENST00000536513 ANO8Q9HCE9 1232 aaPredicted RBP10.83□□□□□ -0.68
ABCA4-207ENST00000536513 ZRANB1Q9UGI0 708 aa10.83□□□□□ -0.68
ABCA4-207ENST00000536513 APAF1O14727 1248 aa10.83□□□□□ -0.68
ABCA4-207ENST00000536513 MTHFSP49914 203 aa10.83□□□□□ -0.68
ABCA4-207ENST00000536513 RALBP1Q15311 655 aa10.82□□□□□ -0.68
ABCA4-207ENST00000536513 HMOX1P09601 288 aa10.81□□□□□ -0.68
ABCA4-207ENST00000536513 CARD14Q9BXL6 1004 aa10.81□□□□□ -0.68
ABCA4-207ENST00000536513 ZBTB47Q9UFB7 747 aaPredicted RBP10.81□□□□□ -0.68
ABCA4-207ENST00000536513 AMOTL2Q9Y2J4 779 aa10.81□□□□□ -0.68
ABCA4-207ENST00000536513 A0A0G2JS52 829 aa10.81□□□□□ -0.68
ABCA4-207ENST00000536513 PPP2R1AP30153 589 aa10.81□□□□□ -0.68
ABCA4-207ENST00000536513 RRS1Q15050 365 aaKnown RBP10.81□□□□□ -0.68
ABCA4-207ENST00000536513 MLH3Q9UHC1 1453 aa10.81□□□□□ -0.68
ABCA4-207ENST00000536513 THEMISQ8N1K5 641 aaPredicted RBP10.8□□□□□ -0.68
ABCA4-207ENST00000536513 TERF2IPQ9NYB0 399 aa10.8□□□□□ -0.68
ABCA4-207ENST00000536513 NEFMP07197 916 aa10.8□□□□□ -0.68
ABCA4-207ENST00000536513 VSIG10Q8N0Z9 540 aa10.8□□□□□ -0.68
ABCA4-207ENST00000536513 BCL2L13Q9BXK5 485 aa10.8□□□□□ -0.68
ABCA4-207ENST00000536513 TNRQ92752 1358 aa10.8□□□□□ -0.68
ABCA4-207ENST00000536513 KIDINS220Q9ULH0 1771 aa10.8□□□□□ -0.68
ABCA4-207ENST00000536513 RALGAPBQ86X10 1494 aa10.79□□□□□ -0.68
ABCA4-207ENST00000536513 HECW2Q9P2P5 1572 aa10.79□□□□□ -0.68
ABCA4-207ENST00000536513 FRAT1Q92837 279 aaPredicted RBP10.79□□□□□ -0.68
ABCA4-207ENST00000536513 PNISRQ8TF01 805 aaKnown RBP10.79□□□□□ -0.68
ABCA4-207ENST00000536513 CFAP53Q96M91 514 aa10.79□□□□□ -0.68
ABCA4-207ENST00000536513 SPATA31E1Q6ZUB1 1445 aa10.79□□□□□ -0.68
ABCA4-207ENST00000536513 UHRF1BP1Q6BDS2 1440 aa10.78□□□□□ -0.68
ABCA4-207ENST00000536513 ELL2O00472 640 aaPredicted RBP10.78□□□□□ -0.68
ABCA4-207ENST00000536513 FBXO3Q9UK99 471 aa10.78□□□□□ -0.68
ABCA4-207ENST00000536513 PLEKHH1Q9ULM0 1364 aa10.78□□□□□ -0.68
ABCA4-207ENST00000536513 TCERG1O14776 1098 aaKnown RBP10.78□□□□□ -0.68
ABCA4-207ENST00000536513 NME9Q86XW9 330 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms