RNA–Protein interactions for RNA: ENST00000535043.1

GABRA3-204, Transcript of gamma-aminobutyric acid type A receptor alpha3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA3, Length 1,697 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA3-204ENST00000535043 NCOA1Q15788 1441 aa9.21□□□□□ -0.94
GABRA3-204ENST00000535043 ROCK1Q13464 1354 aa9.2□□□□□ -0.94
GABRA3-204ENST00000535043 BCL11BQ9C0K0 894 aaPredicted RBP9.2□□□□□ -0.94
GABRA3-204ENST00000535043 DUOX2Q9NRD8 1548 aa9.2□□□□□ -0.94
GABRA3-204ENST00000535043 ADAMTSL3P82987 1691 aa9.2□□□□□ -0.94
GABRA3-204ENST00000535043 KDM4FA0A1W2PPD8 638 aa9.2□□□□□ -0.94
GABRA3-204ENST00000535043 CHIC2Q9UKJ5 165 aa9.2□□□□□ -0.94
GABRA3-204ENST00000535043 PTPRKQ15262 1439 aa9.19□□□□□ -0.94
GABRA3-204ENST00000535043 KIF15Q9NS87 1388 aa9.19□□□□□ -0.94
GABRA3-204ENST00000535043 RRP7BPQ9NSQ0 103 aa9.18□□□□□ -0.94
GABRA3-204ENST00000535043 STK24Q9Y6E0 443 aa9.18□□□□□ -0.94
GABRA3-204ENST00000535043 EIF2AK4Q9P2K8 1649 aaKnown RBP9.18□□□□□ -0.94
GABRA3-204ENST00000535043 ERBINQ96RT1 1412 aa9.17□□□□□ -0.94
GABRA3-204ENST00000535043 KIF3BO15066 747 aa9.16□□□□□ -0.94
GABRA3-204ENST00000535043 ITGAEP38570 1179 aa9.16□□□□□ -0.94
GABRA3-204ENST00000535043 FAM135AQ9P2D6 1515 aa9.15□□□□□ -0.94
GABRA3-204ENST00000535043 MLECQ14165 292 aa9.15□□□□□ -0.94
GABRA3-204ENST00000535043 NBR1Q14596 966 aa9.15□□□□□ -0.94
GABRA3-204ENST00000535043 GGT6Q6P531 493 aa9.15□□□□□ -0.94
GABRA3-204ENST00000535043 CNTLNQ9NXG0 1405 aa9.15□□□□□ -0.95
GABRA3-204ENST00000535043 ANKRD50Q9ULJ7 1429 aa9.15□□□□□ -0.95
GABRA3-204ENST00000535043 MADDQ8WXG6 1647 aa9.14□□□□□ -0.95
GABRA3-204ENST00000535043 RNF17Q9BXT8 1623 aaKnown RBP9.14□□□□□ -0.95
GABRA3-204ENST00000535043 FER1L4A9Z1Z3 1794 aa9.14□□□□□ -0.95
GABRA3-204ENST00000535043 CHADLQ6NUI6 762 aa9.14□□□□□ -0.95
GABRA3-204ENST00000535043 ESF1Q9H501 851 aaKnown RBP9.13□□□□□ -0.95
GABRA3-204ENST00000535043 DEPDC5O75140 1603 aa9.13□□□□□ -0.95
GABRA3-204ENST00000535043 MROH2AA6NES4 1674 aa9.13□□□□□ -0.95
GABRA3-204ENST00000535043 RIMS1Q86UR5 1692 aaKnown RBP9.12□□□□□ -0.95
GABRA3-204ENST00000535043 PTPRMP28827 1452 aa9.12□□□□□ -0.95
GABRA3-204ENST00000535043 HFM1A2PYH4 1435 aa9.12□□□□□ -0.95
GABRA3-204ENST00000535043 CLSPNQ9HAW4 1339 aa9.12□□□□□ -0.95
GABRA3-204ENST00000535043 KDM5DQ9BY66 1539 aa9.11□□□□□ -0.95
GABRA3-204ENST00000535043 NAIPQ13075 1403 aa9.11□□□□□ -0.95
GABRA3-204ENST00000535043 YTHDC1Q96MU7 727 aaKnown RBP9.11□□□□□ -0.95
GABRA3-204ENST00000535043 ZC3H13Q5T200 1668 aaKnown RBP9.11□□□□□ -0.95
GABRA3-204ENST00000535043 GCC2Q8IWJ2 1684 aa9.11□□□□□ -0.95
GABRA3-204ENST00000535043 MROH1Q8NDA8 1641 aa9.11□□□□□ -0.95
GABRA3-204ENST00000535043 PRDM15P57071 1507 aaPredicted RBP9.11□□□□□ -0.95
GABRA3-204ENST00000535043 WASHC2CQ9Y4E1 1318 aa9.1□□□□□ -0.95
GABRA3-204ENST00000535043 ZMYM3Q14202 1370 aa9.1□□□□□ -0.95
GABRA3-204ENST00000535043 KANK1Q14678 1352 aa9.1□□□□□ -0.95
GABRA3-204ENST00000535043 CLTCQ00610 1675 aaKnown RBP9.1□□□□□ -0.95
GABRA3-204ENST00000535043 VWDEQ8N2E2 1590 aa9.09□□□□□ -0.95
GABRA3-204ENST00000535043 SETD1BQ9UPS6 1966 aaKnown RBP9.09□□□□□ -0.95
GABRA3-204ENST00000535043 C3P01024 1663 aa9.09□□□□□ -0.96
GABRA3-204ENST00000535043 UNC13BO14795 1591 aa9.08□□□□□ -0.96
GABRA3-204ENST00000535043 ABCC3O15438 1527 aa9.08□□□□□ -0.96
GABRA3-204ENST00000535043 LMTK2Q8IWU2 1503 aa9.08□□□□□ -0.96
GABRA3-204ENST00000535043 CADPS2Q86UW7 1296 aa9.08□□□□□ -0.96
GABRA3-204ENST00000535043 TSPYL2Q9H2G4 693 aaPredicted RBP9.08□□□□□ -0.96
GABRA3-204ENST00000535043 ARHGAP31Q2M1Z3 1444 aa9.07□□□□□ -0.96
GABRA3-204ENST00000535043 NPATQ14207 1427 aa9.07□□□□□ -0.96
GABRA3-204ENST00000535043 CEP152O94986 1710 aa9.06□□□□□ -0.96
GABRA3-204ENST00000535043 PZPP20742 1482 aa9.06□□□□□ -0.96
GABRA3-204ENST00000535043 CEBPAP49715 358 aaPredicted RBP9.06□□□□□ -0.96
GABRA3-204ENST00000535043 SETD5Q9C0A6 1442 aa9.06□□□□□ -0.96
GABRA3-204ENST00000535043 FARP1Q9Y4F1 1045 aaPredicted RBP9.06□□□□□ -0.96
GABRA3-204ENST00000535043 IQGAP3Q86VI3 1631 aa9.05□□□□□ -0.96
GABRA3-204ENST00000535043 PCDHB8Q9UN66 801 aa9.05□□□□□ -0.96
GABRA3-204ENST00000535043 PCDHB13Q9Y5F0 798 aa9.05□□□□□ -0.96
GABRA3-204ENST00000535043 NUP155O75694 1391 aa9.05□□□□□ -0.96
GABRA3-204ENST00000535043 CAMSAP1Q5T5Y3 1602 aa9.05□□□□□ -0.96
GABRA3-204ENST00000535043 TET3O43151 1660 aa9.04□□□□□ -0.96
GABRA3-204ENST00000535043 RYDENQ9NUL5 291 aaKnown RBP9.04□□□□□ -0.96
GABRA3-204ENST00000535043 CCDC61Q9Y6R9 512 aa9.04□□□□□ -0.96
GABRA3-204ENST00000535043 RPRD2Q5VT52 1461 aaKnown RBP9.03□□□□□ -0.96
GABRA3-204ENST00000535043 ZNF467Q7Z7K2 595 aaPredicted RBP9.03□□□□□ -0.96
GABRA3-204ENST00000535043 EFCAB6Q5THR3 1501 aa9.02□□□□□ -0.96
GABRA3-204ENST00000535043 PREX1Q8TCU6 1659 aa9.02□□□□□ -0.97
GABRA3-204ENST00000535043 SPATA31D1Q6ZQQ2 1576 aa9.02□□□□□ -0.97
GABRA3-204ENST00000535043 RAB3GAP2Q9H2M9 1393 aa9.01□□□□□ -0.97
GABRA3-204ENST00000535043 PDAP1Q13442 181 aaKnown RBP9.01□□□□□ -0.97
GABRA3-204ENST00000535043 FBXO31Q5XUX0 539 aaPredicted RBP9.01□□□□□ -0.97
GABRA3-204ENST00000535043 TRIM52Q96A61 297 aa9.01□□□□□ -0.97
GABRA3-204ENST00000535043 MFRPQ9BY79 579 aa9.01□□□□□ -0.97
GABRA3-204ENST00000535043 CFAP65Q6ZU64 1925 aaKnown RBP9.01□□□□□ -0.97
GABRA3-204ENST00000535043 ERVK-7P63135 1459 aa9.01□□□□□ -0.97
GABRA3-204ENST00000535043 DHX57Q6P158 1386 aaKnown RBP9.01□□□□□ -0.97
GABRA3-204ENST00000535043 TNRQ92752 1358 aa9.01□□□□□ -0.97
GABRA3-204ENST00000535043 UHRF1BP1Q6BDS2 1440 aa9□□□□□ -0.97
GABRA3-204ENST00000535043 E9PCH4 1651 aa9□□□□□ -0.97
GABRA3-204ENST00000535043 NOS1P29475 1434 aa9□□□□□ -0.97
GABRA3-204ENST00000535043 NLRP1Q9C000 1473 aa8.99□□□□□ -0.97
GABRA3-204ENST00000535043 KCNV2Q8TDN2 545 aa8.98□□□□□ -0.97
GABRA3-204ENST00000535043 MPHOSPH9Q99550 1183 aa8.98□□□□□ -0.97
GABRA3-204ENST00000535043 SLC52A1Q9NWF4 448 aa8.98□□□□□ -0.97
GABRA3-204ENST00000535043 LMTK3Q96Q04 1460 aa8.98□□□□□ -0.97
GABRA3-204ENST00000535043 MYO3AQ8NEV4 1616 aa8.98□□□□□ -0.97
GABRA3-204ENST00000535043 ZNF142P52746 1687 aaPredicted RBP8.98□□□□□ -0.97
GABRA3-204ENST00000535043 PSEN1P49768 467 aa8.97□□□□□ -0.97
GABRA3-204ENST00000535043 PTPRTO14522 1441 aa8.97□□□□□ -0.97
GABRA3-204ENST00000535043 A2ML1A8K2U0 1454 aa8.97□□□□□ -0.97
GABRA3-204ENST00000535043 PRKAR2AP13861 404 aaKnown RBP8.97□□□□□ -0.97
GABRA3-204ENST00000535043 ZNF579Q8NAF0 562 aaKnown RBP8.97□□□□□ -0.97
GABRA3-204ENST00000535043 CEP170BQ9Y4F5 1589 aaPredicted RBP8.96□□□□□ -0.98
GABRA3-204ENST00000535043 PPP1R37O75864 691 aa8.96□□□□□ -0.98
GABRA3-204ENST00000535043 FXR2P51116 673 aaKnown RBP eCLIP8.96□□□□□ -0.98
GABRA3-204ENST00000535043 KDM5AP29375 1690 aaKnown RBP8.96□□□□□ -0.98
GABRA3-204ENST00000535043 SYNMO15061 1565 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms