RNA–Protein interactions for RNA: ENST00000534839.1

TNC-209, Transcript of tenascin C, humanhuman

TSL 3

Gene TNC, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-209ENST00000534839 CDK11AQ9UQ88 783 aaPredicted RBP17.06■□□□□ 0.32
TNC-209ENST00000534839 CD44P16070 742 aaKnown RBP17.05■□□□□ 0.32
TNC-209ENST00000534839 ATP1B4Q9UN42 357 aaPredicted RBP17.05■□□□□ 0.32
TNC-209ENST00000534839 PZPP20742 1482 aa17.05■□□□□ 0.32
TNC-209ENST00000534839 MIA2Q96PC5 1412 aa17.04■□□□□ 0.32
TNC-209ENST00000534839 TMEM94Q12767 1356 aa17.04■□□□□ 0.32
TNC-209ENST00000534839 COL16A1Q07092 1604 aaPredicted RBP17.04■□□□□ 0.32
TNC-209ENST00000534839 LRRC9Q6ZRR7 1453 aa17.04■□□□□ 0.32
TNC-209ENST00000534839 ATP7AQ04656 1500 aa17.03■□□□□ 0.32
TNC-209ENST00000534839 TSPYL2Q9H2G4 693 aaPredicted RBP17.01■□□□□ 0.31
TNC-209ENST00000534839 CLIP1P30622 1438 aa17.01■□□□□ 0.31
TNC-209ENST00000534839 MAP3K1Q13233 1512 aa17.01■□□□□ 0.31
TNC-209ENST00000534839 AFF2P51816 1311 aa16.99■□□□□ 0.31
TNC-209ENST00000534839 FGD6Q6ZV73 1430 aa16.99■□□□□ 0.31
TNC-209ENST00000534839 ATAD2Q6PL18 1390 aa16.99■□□□□ 0.31
TNC-209ENST00000534839 INO80Q9ULG1 1556 aaPredicted RBP16.98■□□□□ 0.31
TNC-209ENST00000534839 HNRNPMP52272 730 aaKnown RBP eCLIP16.98■□□□□ 0.31
TNC-209ENST00000534839 SYCP2Q9BX26 1530 aa16.97■□□□□ 0.31
TNC-209ENST00000534839 LRP5O75197 1615 aa16.97■□□□□ 0.31
TNC-209ENST00000534839 RBM6P78332 1123 aaKnown RBP16.96■□□□□ 0.31
TNC-209ENST00000534839 SLAIN2Q9P270 581 aa16.96■□□□□ 0.31
TNC-209ENST00000534839 ZNF777Q9ULD5 760 aaPredicted RBP16.95■□□□□ 0.3
TNC-209ENST00000534839 SCAF11Q99590 1463 aaKnown RBP16.94■□□□□ 0.3
TNC-209ENST00000534839 LTKP29376 864 aa16.94■□□□□ 0.3
TNC-209ENST00000534839 DCAF8Q5TAQ9 597 aa16.94■□□□□ 0.3
TNC-209ENST00000534839 QTRT2Q9H974 415 aaKnown RBP16.94■□□□□ 0.3
TNC-209ENST00000534839 SHPRHQ149N8 1683 aa16.94■□□□□ 0.3
TNC-209ENST00000534839 PROSER2Q86WR7 435 aaPredicted RBP16.92■□□□□ 0.3
TNC-209ENST00000534839 CDC42BPAQ5VT25 1732 aa16.91■□□□□ 0.3
TNC-209ENST00000534839 ADGBQ8N7X0 1667 aa16.91■□□□□ 0.3
TNC-209ENST00000534839 FAM212AQ96EL1 285 aa16.9■□□□□ 0.3
TNC-209ENST00000534839 YY1P25490 414 aa16.89■□□□□ 0.29
TNC-209ENST00000534839 TXNDC2Q86VQ3 553 aa16.89■□□□□ 0.29
TNC-209ENST00000534839 CIZ1Q9ULV3 898 aaPredicted RBP16.88■□□□□ 0.29
TNC-209ENST00000534839 CCDC61Q9Y6R9 512 aa16.88■□□□□ 0.29
TNC-209ENST00000534839 WASHC2CQ9Y4E1 1318 aa16.88■□□□□ 0.29
TNC-209ENST00000534839 MSH6P52701 1360 aa16.88■□□□□ 0.29
TNC-209ENST00000534839 PAK3O75914 559 aaPredicted RBP16.87■□□□□ 0.29
TNC-209ENST00000534839 KCNA6P17658 529 aa16.87■□□□□ 0.29
TNC-209ENST00000534839 PRDM15P57071 1507 aaPredicted RBP16.86■□□□□ 0.29
TNC-209ENST00000534839 TIAM1Q13009 1591 aa16.86■□□□□ 0.29
TNC-209ENST00000534839 PHF12Q96QT6 1004 aa16.86■□□□□ 0.29
TNC-209ENST00000534839 UBR1Q8IWV7 1749 aa16.85■□□□□ 0.29
TNC-209ENST00000534839 KIF3BO15066 747 aa16.85■□□□□ 0.29
TNC-209ENST00000534839 CCDC125Q86Z20 511 aa16.85■□□□□ 0.29
TNC-209ENST00000534839 ARHGAP23Q9P227 1491 aa16.85■□□□□ 0.29
TNC-209ENST00000534839 LRRIQ1Q96JM4 1722 aa16.84■□□□□ 0.29
TNC-209ENST00000534839 DHX29Q7Z478 1369 aaKnown RBP16.84■□□□□ 0.29
TNC-209ENST00000534839 NCOA2Q15596 1464 aa16.84■□□□□ 0.29
TNC-209ENST00000534839 AHDC1Q5TGY3 1603 aaPredicted RBP16.83■□□□□ 0.28
TNC-209ENST00000534839 NGLY1Q96IV0 654 aa16.83■□□□□ 0.28
TNC-209ENST00000534839 DIP2AQ14689 1571 aa16.82■□□□□ 0.28
TNC-209ENST00000534839 SLIT1O75093 1534 aa16.82■□□□□ 0.28
TNC-209ENST00000534839 FMN1Q68DA7 1419 aa16.82■□□□□ 0.28
TNC-209ENST00000534839 GSE1Q14687 1217 aa16.82■□□□□ 0.28
TNC-209ENST00000534839 C8orf37Q96NL8 207 aa16.82■□□□□ 0.28
TNC-209ENST00000534839 KIAA1107Q9UPP5 1409 aa16.81■□□□□ 0.28
TNC-209ENST00000534839 ZNF579Q8NAF0 562 aaKnown RBP16.81■□□□□ 0.28
TNC-209ENST00000534839 EP400Q96L91 3159 aa16.81■□□□□ 0.28
TNC-209ENST00000534839 NWD1Q149M9 1564 aa16.79■□□□□ 0.28
TNC-209ENST00000534839 ABCC3O15438 1527 aa16.79■□□□□ 0.28
TNC-209ENST00000534839 EID1Q9Y6B2 187 aa16.78■□□□□ 0.28
TNC-209ENST00000534839 GPATCH8Q9UKJ3 1502 aaKnown RBP16.77■□□□□ 0.28
TNC-209ENST00000534839 PYGBP11216 843 aa16.77■□□□□ 0.28
TNC-209ENST00000534839 NKTRP30414 1462 aaKnown RBP16.77■□□□□ 0.28
TNC-209ENST00000534839 ERVK-7P63135 1459 aa16.77■□□□□ 0.28
TNC-209ENST00000534839 NHSL1Q5SYE7 1610 aa16.77■□□□□ 0.27
TNC-209ENST00000534839 KDM5AP29375 1690 aaKnown RBP16.76■□□□□ 0.27
TNC-209ENST00000534839 SLC26A8Q96RN1 970 aa16.76■□□□□ 0.27
TNC-209ENST00000534839 PLEKHH2Q8IVE3 1493 aa16.75■□□□□ 0.27
TNC-209ENST00000534839 DEFB132Q7Z7B7 95 aa16.74■□□□□ 0.27
TNC-209ENST00000534839 PSDA5PKW4 1024 aaPredicted RBP16.73■□□□□ 0.27
TNC-209ENST00000534839 HRCP23327 699 aa16.73■□□□□ 0.27
TNC-209ENST00000534839 KIF12Q96FN5 646 aa16.73■□□□□ 0.27
TNC-209ENST00000534839 RTN4Q9NQC3 1192 aaKnown RBP16.73■□□□□ 0.27
TNC-209ENST00000534839 SENP3-EIF4A1A0A087X0R7 540 aa16.72■□□□□ 0.27
TNC-209ENST00000534839 SP7Q8TDD2 431 aaPredicted RBP16.71■□□□□ 0.27
TNC-209ENST00000534839 TET3O43151 1660 aa16.71■□□□□ 0.27
TNC-209ENST00000534839 RTEL1-TNFRSF6BF6WH68 1400 aa16.7■□□□□ 0.26
TNC-209ENST00000534839 MAST1Q9Y2H9 1570 aa16.69■□□□□ 0.26
TNC-209ENST00000534839 MAP3K13O43283 966 aa16.69■□□□□ 0.26
TNC-209ENST00000534839 CFDP1Q9UEE9 299 aaPredicted RBP16.69■□□□□ 0.26
TNC-209ENST00000534839 TMEM2Q9UHN6 1383 aa16.68■□□□□ 0.26
TNC-209ENST00000534839 BLMP54132 1417 aaPredicted RBP16.68■□□□□ 0.26
TNC-209ENST00000534839 BCL9LQ86UU0 1499 aa16.67■□□□□ 0.26
TNC-209ENST00000534839 TRPC5Q9UL62 973 aaPredicted RBP16.67■□□□□ 0.26
TNC-209ENST00000534839 SETD5Q9C0A6 1442 aa16.67■□□□□ 0.26
TNC-209ENST00000534839 BRINP3Q76B58 766 aa16.66■□□□□ 0.26
TNC-209ENST00000534839 USP21Q9UK80 565 aa16.66■□□□□ 0.26
TNC-209ENST00000534839 ARHGAP35Q9NRY4 1499 aa16.66■□□□□ 0.26
TNC-209ENST00000534839 GABBR2O75899 941 aa16.65■□□□□ 0.26
TNC-209ENST00000534839 ADAMTS2O95450 1211 aa16.65■□□□□ 0.26
TNC-209ENST00000534839 CHRM1P11229 460 aaPredicted RBP16.65■□□□□ 0.26
TNC-209ENST00000534839 MBD5Q9P267 1494 aa16.65■□□□□ 0.26
TNC-209ENST00000534839 ZNF644Q9H582 1327 aaPredicted RBP16.65■□□□□ 0.26
TNC-209ENST00000534839 ATRNO75882 1429 aa16.62■□□□□ 0.25
TNC-209ENST00000534839 GALR2O43603 387 aaPredicted RBP16.62■□□□□ 0.25
TNC-209ENST00000534839 ECM2O94769 699 aaPredicted RBP16.62■□□□□ 0.25
TNC-209ENST00000534839 AMER1Q5JTC6 1135 aaPredicted RBP16.62■□□□□ 0.25
TNC-209ENST00000534839 CADPS2Q86UW7 1296 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms