RNA–Protein interactions for RNA: ENST00000534189.1

CCDC180-213, Transcript of coiled-coil domain containing 180, humanhuman

TSL 3

Gene CCDC180, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180-213ENST00000534189 NOS1P29475 1434 aa24.68■■□□□ 1.54
CCDC180-213ENST00000534189 UNC13BO14795 1591 aa24.67■■□□□ 1.54
CCDC180-213ENST00000534189 SRCAPQ6ZRS2 3230 aa24.67■■□□□ 1.54
CCDC180-213ENST00000534189 PROSER2Q86WR7 435 aaPredicted RBP24.64■■□□□ 1.54
CCDC180-213ENST00000534189 TET3O43151 1660 aa24.64■■□□□ 1.53
CCDC180-213ENST00000534189 TMEM2Q9UHN6 1383 aa24.64■■□□□ 1.53
CCDC180-213ENST00000534189 PIK3C2BO00750 1634 aa24.64■■□□□ 1.53
CCDC180-213ENST00000534189 ZNF772Q68DY9 489 aaPredicted RBP24.63■■□□□ 1.53
CCDC180-213ENST00000534189 RBM33Q96EV2 1170 aaKnown RBP24.63■■□□□ 1.53
CCDC180-213ENST00000534189 NUP155O75694 1391 aa24.63■■□□□ 1.53
CCDC180-213ENST00000534189 PHLPP1O60346 1717 aa24.63■■□□□ 1.53
CCDC180-213ENST00000534189 SLAIN2Q9P270 581 aa24.62■■□□□ 1.53
CCDC180-213ENST00000534189 LRP6O75581 1613 aa24.61■■□□□ 1.53
CCDC180-213ENST00000534189 TRIM52Q96A61 297 aa24.61■■□□□ 1.53
CCDC180-213ENST00000534189 KDM5AP29375 1690 aaKnown RBP24.59■■□□□ 1.53
CCDC180-213ENST00000534189 GCC2Q8IWJ2 1684 aa24.59■■□□□ 1.53
CCDC180-213ENST00000534189 SPATA31A6Q5VVP1 1343 aa24.59■■□□□ 1.53
CCDC180-213ENST00000534189 NKTRP30414 1462 aaKnown RBP24.58■■□□□ 1.52
CCDC180-213ENST00000534189 COL16A1Q07092 1604 aaPredicted RBP24.57■■□□□ 1.52
CCDC180-213ENST00000534189 IQGAP3Q86VI3 1631 aa24.57■■□□□ 1.52
CCDC180-213ENST00000534189 MSH6P52701 1360 aa24.56■■□□□ 1.52
CCDC180-213ENST00000534189 NWD1Q149M9 1564 aa24.55■■□□□ 1.52
CCDC180-213ENST00000534189 SLC26A8Q96RN1 970 aa24.55■■□□□ 1.52
CCDC180-213ENST00000534189 CDK12Q9NYV4 1490 aaPredicted RBP24.54■■□□□ 1.52
CCDC180-213ENST00000534189 ADGRB3O60242 1522 aa24.54■■□□□ 1.52
CCDC180-213ENST00000534189 RXRBP28702 533 aa24.53■■□□□ 1.52
CCDC180-213ENST00000534189 HDGFP51858 240 aaKnown RBP24.52■■□□□ 1.52
CCDC180-213ENST00000534189 NAIPQ13075 1403 aa24.52■■□□□ 1.52
CCDC180-213ENST00000534189 E9PCH4 1651 aa24.51■■□□□ 1.51
CCDC180-213ENST00000534189 CHGAP10645 457 aaKnown RBP24.5■■□□□ 1.51
CCDC180-213ENST00000534189 MEX3CQ5U5Q3 659 aaKnown RBP24.5■■□□□ 1.51
CCDC180-213ENST00000534189 BCANQ96GW7 911 aa24.46■■□□□ 1.51
CCDC180-213ENST00000534189 HFM1A2PYH4 1435 aa24.45■■□□□ 1.51
CCDC180-213ENST00000534189 PPP1R15AO75807 674 aaPredicted RBP24.44■■□□□ 1.5
CCDC180-213ENST00000534189 SHPRHQ149N8 1683 aa24.43■■□□□ 1.5
CCDC180-213ENST00000534189 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.43■■□□□ 1.5
CCDC180-213ENST00000534189 TMEM131LA2VDJ0 1609 aa24.43■■□□□ 1.5
CCDC180-213ENST00000534189 RIMS2Q9UQ26 1411 aa24.42■■□□□ 1.5
CCDC180-213ENST00000534189 AHDC1Q5TGY3 1603 aaPredicted RBP24.42■■□□□ 1.5
CCDC180-213ENST00000534189 NCOA3Q9Y6Q9 1424 aa24.41■■□□□ 1.5
CCDC180-213ENST00000534189 ZFYVE9O95405 1425 aa24.4■■□□□ 1.5
CCDC180-213ENST00000534189 MYO5BQ9ULV0 1848 aa24.38■■□□□ 1.49
CCDC180-213ENST00000534189 PLEKHG1Q9ULL1 1385 aa24.38■■□□□ 1.49
CCDC180-213ENST00000534189 CHD2O14647 1828 aaKnown RBP24.37■■□□□ 1.49
CCDC180-213ENST00000534189 DIP2AQ14689 1571 aa24.35■■□□□ 1.49
CCDC180-213ENST00000534189 SPHKAPQ2M3C7 1700 aa24.35■■□□□ 1.49
CCDC180-213ENST00000534189 AFF2P51816 1311 aa24.35■■□□□ 1.49
CCDC180-213ENST00000534189 SLC4A1APQ9BWU0 796 aaKnown RBP24.34■■□□□ 1.49
CCDC180-213ENST00000534189 RGS12O14924 1447 aa24.34■■□□□ 1.49
CCDC180-213ENST00000534189 NUTM2DQ5VT03 806 aaPredicted RBP24.32■■□□□ 1.48
CCDC180-213ENST00000534189 CADPS2Q86UW7 1296 aa24.32■■□□□ 1.48
CCDC180-213ENST00000534189 ZNF326Q5BKZ1 582 aaKnown RBP24.31■■□□□ 1.48
CCDC180-213ENST00000534189 TBX22Q9Y458 520 aa24.31■■□□□ 1.48
CCDC180-213ENST00000534189 NUTM2BA6NNL0 878 aaPredicted RBP24.3■■□□□ 1.48
CCDC180-213ENST00000534189 NUTM2EB1AL46 878 aaPredicted RBP24.3■■□□□ 1.48
CCDC180-213ENST00000534189 NUTM2AQ8IVF1 878 aaPredicted RBP24.3■■□□□ 1.48
CCDC180-213ENST00000534189 C19orf44Q9H6X5 657 aa24.3■■□□□ 1.48
CCDC180-213ENST00000534189 RBM6P78332 1123 aaKnown RBP24.29■■□□□ 1.48
CCDC180-213ENST00000534189 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.27■■□□□ 1.48
CCDC180-213ENST00000534189 TRPM2O94759 1503 aa24.27■■□□□ 1.48
CCDC180-213ENST00000534189 BRINP3Q76B58 766 aa24.27■■□□□ 1.48
CCDC180-213ENST00000534189 ACIN1Q9UKV3 1341 aaKnown RBP24.27■■□□□ 1.48
CCDC180-213ENST00000534189 QTRT2Q9H974 415 aaKnown RBP24.26■■□□□ 1.47
CCDC180-213ENST00000534189 ATF3P18847 181 aa24.25■■□□□ 1.47
CCDC180-213ENST00000534189 SETD5Q9C0A6 1442 aa24.25■■□□□ 1.47
CCDC180-213ENST00000534189 C14orf37Q86TY3 774 aa24.24■■□□□ 1.47
CCDC180-213ENST00000534189 CLTCL1P53675 1640 aa24.23■■□□□ 1.47
CCDC180-213ENST00000534189 ADAMTS13Q76LX8 1427 aa24.22■■□□□ 1.47
CCDC180-213ENST00000534189 PIK3R4Q99570 1358 aa24.21■■□□□ 1.47
CCDC180-213ENST00000534189 ZRANB1Q9UGI0 708 aa24.21■■□□□ 1.47
CCDC180-213ENST00000534189 MPHOSPH9Q99550 1183 aa24.19■■□□□ 1.46
CCDC180-213ENST00000534189 ATAD2Q6PL18 1390 aa24.18■■□□□ 1.46
CCDC180-213ENST00000534189 SETBP1Q9Y6X0 1596 aa24.18■■□□□ 1.46
CCDC180-213ENST00000534189 FOXD1Q16676 465 aa24.18■■□□□ 1.46
CCDC180-213ENST00000534189 C8orf37Q96NL8 207 aa24.18■■□□□ 1.46
CCDC180-213ENST00000534189 KIF1BO60333 1816 aa24.18■■□□□ 1.46
CCDC180-213ENST00000534189 LRRC59Q96AG4 307 aaKnown RBP24.16■■□□□ 1.46
CCDC180-213ENST00000534189 ASXL1Q8IXJ9 1541 aa24.15■■□□□ 1.46
CCDC180-213ENST00000534189 NGLY1Q96IV0 654 aa24.15■■□□□ 1.46
CCDC180-213ENST00000534189 RPGRIP1LQ68CZ1 1315 aa24.14■■□□□ 1.46
CCDC180-213ENST00000534189 VGFO15240 615 aaPredicted RBP24.14■■□□□ 1.45
CCDC180-213ENST00000534189 DCCP43146 1447 aa24.14■■□□□ 1.45
CCDC180-213ENST00000534189 AMOTL2Q9Y2J4 779 aa24.14■■□□□ 1.45
CCDC180-213ENST00000534189 NHSL1Q5SYE7 1610 aa24.13■■□□□ 1.45
CCDC180-213ENST00000534189 NEXMIFQ5QGS0 1516 aa24.12■■□□□ 1.45
CCDC180-213ENST00000534189 PNPLA6Q8IY17 1366 aa24.12■■□□□ 1.45
CCDC180-213ENST00000534189 CCDC144AA2RUR9 1427 aa24.1■■□□□ 1.45
CCDC180-213ENST00000534189 MST1RQ04912 1400 aa24.09■■□□□ 1.45
CCDC180-213ENST00000534189 EP400Q96L91 3159 aa24.08■■□□□ 1.45
CCDC180-213ENST00000534189 PTPRUQ92729 1446 aa24.08■■□□□ 1.44
CCDC180-213ENST00000534189 RAB3GAP2Q9H2M9 1393 aa24.07■■□□□ 1.44
CCDC180-213ENST00000534189 NRXN3Q9Y4C0 1643 aa24.07■■□□□ 1.44
CCDC180-213ENST00000534189 CCDC125Q86Z20 511 aa24.06■■□□□ 1.44
CCDC180-213ENST00000534189 METP08581 1390 aa24.04■■□□□ 1.44
CCDC180-213ENST00000534189 RGL3Q3MIN7 710 aa24.03■■□□□ 1.44
CCDC180-213ENST00000534189 DDX17Q92841 729 aaKnown RBP24.03■■□□□ 1.44
CCDC180-213ENST00000534189 TRPC5Q9UL62 973 aaPredicted RBP24.02■■□□□ 1.44
CCDC180-213ENST00000534189 ADAMTS2O95450 1211 aa24.01■■□□□ 1.43
CCDC180-213ENST00000534189 FNBP4Q8N3X1 1017 aaPredicted RBP24.01■■□□□ 1.43
CCDC180-213ENST00000534189 USP21Q9UK80 565 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms