RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 ASXL1Q8IXJ9 1541 aa21.86■■□□□ 1.09
CTSB-228ENST00000533455 DDRGK1Q96HY6 314 aa21.84■■□□□ 1.09
CTSB-228ENST00000533455 NPC1L1Q9UHC9 1359 aa21.84■■□□□ 1.09
CTSB-228ENST00000533455 DEPDC5O75140 1603 aa21.84■■□□□ 1.09
CTSB-228ENST00000533455 AMER1Q5JTC6 1135 aaPredicted RBP21.84■■□□□ 1.09
CTSB-228ENST00000533455 DUSP27Q5VZP5 1158 aa21.84■■□□□ 1.09
CTSB-228ENST00000533455 STAC3Q96MF2 364 aa21.84■■□□□ 1.09
CTSB-228ENST00000533455 PPM1GO15355 546 aaPredicted RBP21.83■■□□□ 1.09
CTSB-228ENST00000533455 KNSTRNQ9Y448 316 aa21.83■■□□□ 1.09
CTSB-228ENST00000533455 CDCA8Q53HL2 280 aa21.82■■□□□ 1.08
CTSB-228ENST00000533455 CLTCL1P53675 1640 aa21.82■■□□□ 1.08
CTSB-228ENST00000533455 PTPRTO14522 1441 aa21.82■■□□□ 1.08
CTSB-228ENST00000533455 ZCCHC11Q5TAX3 1644 aaKnown RBP21.81■■□□□ 1.08
CTSB-228ENST00000533455 WDR43Q15061 677 aaKnown RBP eCLIP21.81■■□□□ 1.08
CTSB-228ENST00000533455 KDM5AP29375 1690 aaKnown RBP21.81■■□□□ 1.08
CTSB-228ENST00000533455 NEURL4Q96JN8 1562 aa21.81■■□□□ 1.08
CTSB-228ENST00000533455 C20orf194Q5TEA3 1177 aa21.8■■□□□ 1.08
CTSB-228ENST00000533455 CENPQQ7L2Z9 268 aaPredicted RBP21.8■■□□□ 1.08
CTSB-228ENST00000533455 TET3O43151 1660 aa21.8■■□□□ 1.08
CTSB-228ENST00000533455 ERCC6L2Q5T890 1561 aa21.79■■□□□ 1.08
CTSB-228ENST00000533455 RTEL1-TNFRSF6BF6WH68 1400 aa21.78■■□□□ 1.08
CTSB-228ENST00000533455 TRAPPC8Q9Y2L5 1435 aa21.78■■□□□ 1.08
CTSB-228ENST00000533455 GOLGA2Q08379 1002 aa21.77■■□□□ 1.08
CTSB-228ENST00000533455 LAS1LQ9Y4W2 734 aaKnown RBP21.77■■□□□ 1.08
CTSB-228ENST00000533455 ZFYVE16Q7Z3T8 1539 aa21.77■■□□□ 1.08
CTSB-228ENST00000533455 ARAP3Q8WWN8 1544 aa21.77■■□□□ 1.08
CTSB-228ENST00000533455 NEFMP07197 916 aa21.77■■□□□ 1.07
CTSB-228ENST00000533455 EFCAB2Q5VUJ9 269 aa21.77■■□□□ 1.07
CTSB-228ENST00000533455 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.76■■□□□ 1.07
CTSB-228ENST00000533455 UHRF1BP1LA0JNW5 1464 aa21.75■■□□□ 1.07
CTSB-228ENST00000533455 EIF3AQ14152 1382 aaKnown RBP21.75■■□□□ 1.07
CTSB-228ENST00000533455 SKAP1Q86WV1 359 aa21.75■■□□□ 1.07
CTSB-228ENST00000533455 VWDEQ8N2E2 1590 aa21.74■■□□□ 1.07
CTSB-228ENST00000533455 TRMT2AQ8IZ69 625 aaKnown RBP21.74■■□□□ 1.07
CTSB-228ENST00000533455 SLFN5Q08AF3 891 aa21.73■■□□□ 1.07
CTSB-228ENST00000533455 VIRMAQ69YN4 1812 aaKnown RBP21.71■■□□□ 1.07
CTSB-228ENST00000533455 FAM161AQ3B820 660 aa21.7■■□□□ 1.06
CTSB-228ENST00000533455 NKTRP30414 1462 aaKnown RBP21.69■■□□□ 1.06
CTSB-228ENST00000533455 MAP3K4Q9Y6R4 1608 aa21.69■■□□□ 1.06
CTSB-228ENST00000533455 MYOM2P54296 1465 aa21.68■■□□□ 1.06
CTSB-228ENST00000533455 INO80Q9ULG1 1556 aaPredicted RBP21.68■■□□□ 1.06
CTSB-228ENST00000533455 SPAG9O60271 1321 aaKnown RBP21.68■■□□□ 1.06
CTSB-228ENST00000533455 ABCA6Q8N139 1617 aa21.68■■□□□ 1.06
CTSB-228ENST00000533455 IFT172Q9UG01 1749 aa21.67■■□□□ 1.06
CTSB-228ENST00000533455 C8orf34Q49A92 452 aa21.67■■□□□ 1.06
CTSB-228ENST00000533455 MYO3AQ8NEV4 1616 aa21.67■■□□□ 1.06
CTSB-228ENST00000533455 ERVK-7P63135 1459 aa21.66■■□□□ 1.06
CTSB-228ENST00000533455 SLC24A1O60721 1099 aa21.65■■□□□ 1.06
CTSB-228ENST00000533455 NGEFQ8N5V2 710 aa21.65■■□□□ 1.06
CTSB-228ENST00000533455 KIF1BO60333 1816 aa21.63■■□□□ 1.05
CTSB-228ENST00000533455 ATP7AQ04656 1500 aa21.63■■□□□ 1.05
CTSB-228ENST00000533455 E9PSI1 815 aa21.62■■□□□ 1.05
CTSB-228ENST00000533455 KANK1Q14678 1352 aa21.61■■□□□ 1.05
CTSB-228ENST00000533455 ABCA9Q8IUA7 1624 aa21.61■■□□□ 1.05
CTSB-228ENST00000533455 MROH1Q8NDA8 1641 aa21.61■■□□□ 1.05
CTSB-228ENST00000533455 CCDC146Q8IYE0 955 aa21.6■■□□□ 1.05
CTSB-228ENST00000533455 NINLQ9Y2I6 1382 aa21.6■■□□□ 1.05
CTSB-228ENST00000533455 APAF1O14727 1248 aa21.59■■□□□ 1.05
CTSB-228ENST00000533455 SPINK5Q9NQ38 1064 aaPredicted RBP21.59■■□□□ 1.05
CTSB-228ENST00000533455 SBNO2Q9Y2G9 1366 aa21.58■■□□□ 1.04
CTSB-228ENST00000533455 NFKBIBQ15653 356 aa21.58■■□□□ 1.04
CTSB-228ENST00000533455 NRXN1Q9ULB1 1477 aa21.57■■□□□ 1.04
CTSB-228ENST00000533455 MROH2AA6NES4 1674 aa21.57■■□□□ 1.04
CTSB-228ENST00000533455 SHPRHQ149N8 1683 aa21.57■■□□□ 1.04
CTSB-228ENST00000533455 POLR3AO14802 1390 aaPredicted RBP21.57■■□□□ 1.04
CTSB-228ENST00000533455 AFAP1Q8N556 730 aa21.56■■□□□ 1.04
CTSB-228ENST00000533455 DAXXQ9UER7 740 aaPredicted RBP21.56■■□□□ 1.04
CTSB-228ENST00000533455 EFCAB6Q5THR3 1501 aa21.55■■□□□ 1.04
CTSB-228ENST00000533455 SETBP1Q9Y6X0 1596 aa21.55■■□□□ 1.04
CTSB-228ENST00000533455 ZC3H13Q5T200 1668 aaKnown RBP21.54■■□□□ 1.04
CTSB-228ENST00000533455 PDE3AQ14432 1141 aa21.54■■□□□ 1.04
CTSB-228ENST00000533455 CGNL1Q0VF96 1302 aa21.54■■□□□ 1.04
CTSB-228ENST00000533455 UGGT1Q9NYU2 1555 aa21.53■■□□□ 1.04
CTSB-228ENST00000533455 BCAR3O75815 825 aa21.53■■□□□ 1.04
CTSB-228ENST00000533455 CARD14Q9BXL6 1004 aa21.53■■□□□ 1.04
CTSB-228ENST00000533455 SLC4A3P48751 1232 aa21.52■■□□□ 1.04
CTSB-228ENST00000533455 RGS3P49796 1198 aa21.52■■□□□ 1.04
CTSB-228ENST00000533455 GSE1Q14687 1217 aa21.52■■□□□ 1.04
CTSB-228ENST00000533455 IL27Q8NEV9 243 aa21.52■■□□□ 1.04
CTSB-228ENST00000533455 CFAP70Q5T0N1 1121 aa21.51■■□□□ 1.03
CTSB-228ENST00000533455 USP32Q8NFA0 1604 aa21.5■■□□□ 1.03
CTSB-228ENST00000533455 PPRC1Q5VV67 1664 aaKnown RBP21.5■■□□□ 1.03
CTSB-228ENST00000533455 FANCAO15360 1455 aa21.5■■□□□ 1.03
CTSB-228ENST00000533455 ADGRF5Q8IZF2 1346 aa21.5■■□□□ 1.03
CTSB-228ENST00000533455 DMRT2Q9Y5R5 561 aa21.5■■□□□ 1.03
CTSB-228ENST00000533455 LMTK2Q8IWU2 1503 aa21.49■■□□□ 1.03
CTSB-228ENST00000533455 IQSEC2Q5JU85 1478 aa21.49■■□□□ 1.03
CTSB-228ENST00000533455 CENPJQ9HC77 1338 aaPredicted RBP21.48■■□□□ 1.03
CTSB-228ENST00000533455 ADGRB3O60242 1522 aa21.48■■□□□ 1.03
CTSB-228ENST00000533455 MAPK8IP3Q9UPT6 1336 aa21.47■■□□□ 1.03
CTSB-228ENST00000533455 IGHDP01880 384 aa21.46■■□□□ 1.03
CTSB-228ENST00000533455 WWC1Q8IX03 1113 aa21.46■■□□□ 1.03
CTSB-228ENST00000533455 QRICH2Q9H0J4 1663 aa21.46■■□□□ 1.03
CTSB-228ENST00000533455 KIF3BO15066 747 aa21.46■■□□□ 1.03
CTSB-228ENST00000533455 CLUAP1Q96AJ1 413 aa21.45■■□□□ 1.02
CTSB-228ENST00000533455 PPLO60437 1756 aa21.45■■□□□ 1.02
CTSB-228ENST00000533455 ADGRL1O94910 1474 aa21.44■■□□□ 1.02
CTSB-228ENST00000533455 USP19O94966 1318 aa21.44■■□□□ 1.02
CTSB-228ENST00000533455 AAMPQ13685 434 aa21.44■■□□□ 1.02
CTSB-228ENST00000533455 KIDINS220Q9ULH0 1771 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms