RNA–Protein interactions for RNA: ENST00000533333.5

PAX6-228, Transcript of paired box 6, humanhuman

TSL 2

Gene PAX6, Length 6,173 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-228ENST00000533333 FOSBP53539 338 aa21.53■■□□□ 1.04
PAX6-228ENST00000533333 KIF3BO15066 747 aa21.53■■□□□ 1.04
PAX6-228ENST00000533333 OFD1O75665 1012 aa21.52■■□□□ 1.04
PAX6-228ENST00000533333 FYB1O15117 783 aa21.52■■□□□ 1.04
PAX6-228ENST00000533333 CCDC173Q0VFZ6 552 aa21.52■■□□□ 1.04
PAX6-228ENST00000533333 RDXP35241 583 aaKnown RBP21.52■■□□□ 1.03
PAX6-228ENST00000533333 MAP7D2Q96T17 732 aa21.51■■□□□ 1.03
PAX6-228ENST00000533333 SAFBQ15424 915 aaKnown RBP eCLIP21.5■■□□□ 1.03
PAX6-228ENST00000533333 NUP155O75694 1391 aa21.5■■□□□ 1.03
PAX6-228ENST00000533333 FHAD1B1AJZ9 1412 aa21.5■■□□□ 1.03
PAX6-228ENST00000533333 ACBD3Q9H3P7 528 aa21.5■■□□□ 1.03
PAX6-228ENST00000533333 AEBP2Q6ZN18 517 aaPredicted RBP21.5■■□□□ 1.03
PAX6-228ENST00000533333 WRNQ14191 1432 aaPredicted RBP eCLIP21.49■■□□□ 1.03
PAX6-228ENST00000533333 IKQ13123 557 aaPredicted RBP21.49■■□□□ 1.03
PAX6-228ENST00000533333 COG3Q96JB2 828 aa21.49■■□□□ 1.03
PAX6-228ENST00000533333 WASHC2CQ9Y4E1 1318 aa21.49■■□□□ 1.03
PAX6-228ENST00000533333 NECTIN2Q92692 538 aa21.49■■□□□ 1.03
PAX6-228ENST00000533333 TIMELESSQ9UNS1 1208 aa21.49■■□□□ 1.03
PAX6-228ENST00000533333 EFCAB2Q5VUJ9 269 aa21.48■■□□□ 1.03
PAX6-228ENST00000533333 CCAR1Q8IX12 1150 aaKnown RBP21.48■■□□□ 1.03
PAX6-228ENST00000533333 CEP164Q9UPV0 1460 aa21.48■■□□□ 1.03
PAX6-228ENST00000533333 MTMR7Q9Y216 660 aa21.48■■□□□ 1.03
PAX6-228ENST00000533333 RNF20Q5VTR2 975 aa21.48■■□□□ 1.03
PAX6-228ENST00000533333 BCL2L13Q9BXK5 485 aa21.48■■□□□ 1.03
PAX6-228ENST00000533333 CCDC27Q2M243 656 aa21.47■■□□□ 1.03
PAX6-228ENST00000533333 SASS6Q6UVJ0 657 aa21.47■■□□□ 1.03
PAX6-228ENST00000533333 MNS1Q8NEH6 495 aa21.47■■□□□ 1.03
PAX6-228ENST00000533333 CCDC191Q8NCU4 936 aa21.47■■□□□ 1.03
PAX6-228ENST00000533333 TRAK1Q9UPV9 953 aa21.46■■□□□ 1.03
PAX6-228ENST00000533333 G3BP1Q13283 466 aaKnown RBP eCLIP21.46■■□□□ 1.03
PAX6-228ENST00000533333 CAGE1Q8TC20 777 aa21.45■■□□□ 1.02
PAX6-228ENST00000533333 DCTN1Q14203 1278 aa21.45■■□□□ 1.02
PAX6-228ENST00000533333 VPS37CA5D8V6 355 aaPredicted RBP21.45■■□□□ 1.02
PAX6-228ENST00000533333 DDX58O95786 925 aaKnown RBP21.45■■□□□ 1.02
PAX6-228ENST00000533333 SKIDA1Q1XH10 827 aa21.45■■□□□ 1.02
PAX6-228ENST00000533333 NOM1Q5C9Z4 860 aaKnown RBP21.44■■□□□ 1.02
PAX6-228ENST00000533333 BRMS1Q9HCU9 246 aa21.44■■□□□ 1.02
PAX6-228ENST00000533333 HSP90B2PQ58FF3 399 aa21.44■■□□□ 1.02
PAX6-228ENST00000533333 ARGLU1Q9NWB6 273 aaPredicted RBP21.44■■□□□ 1.02
PAX6-228ENST00000533333 REC8O95072 547 aa21.43■■□□□ 1.02
PAX6-228ENST00000533333 SLC4A3P48751 1232 aa21.42■■□□□ 1.02
PAX6-228ENST00000533333 SETD5Q9C0A6 1442 aa21.42■■□□□ 1.02
PAX6-228ENST00000533333 ZKSCAN2Q63HK3 967 aa21.42■■□□□ 1.02
PAX6-228ENST00000533333 PDILTQ8N807 584 aa21.42■■□□□ 1.02
PAX6-228ENST00000533333 MYO6Q9UM54 1294 aa21.42■■□□□ 1.02
PAX6-228ENST00000533333 CCDC73Q6ZRK6 1079 aa21.41■■□□□ 1.02
PAX6-228ENST00000533333 VSIG10Q8N0Z9 540 aa21.41■■□□□ 1.02
PAX6-228ENST00000533333 RSPH6AQ9H0K4 717 aa21.41■■□□□ 1.02
PAX6-228ENST00000533333 BCL11BQ9C0K0 894 aaPredicted RBP21.41■■□□□ 1.02
PAX6-228ENST00000533333 TNIKQ9UKE5 1360 aa21.4■■□□□ 1.02
PAX6-228ENST00000533333 OLFM4Q6UX06 510 aa21.4■■□□□ 1.02
PAX6-228ENST00000533333 MPHOSPH9Q99550 1183 aa21.4■■□□□ 1.02
PAX6-228ENST00000533333 RALYLQ86SE5 291 aaKnown RBP21.4■■□□□ 1.02
PAX6-228ENST00000533333 IFT57Q9NWB7 429 aa21.4■■□□□ 1.02
PAX6-228ENST00000533333 SMC3Q9UQE7 1217 aa21.4■■□□□ 1.02
PAX6-228ENST00000533333 TTLL5Q6EMB2 1281 aa21.39■■□□□ 1.02
PAX6-228ENST00000533333 ARHGAP35Q9NRY4 1499 aa21.39■■□□□ 1.02
PAX6-228ENST00000533333 KDM4AO75164 1064 aa21.39■■□□□ 1.01
PAX6-228ENST00000533333 PDE3BQ13370 1112 aa21.39■■□□□ 1.01
PAX6-228ENST00000533333 WASHC4Q2M389 1173 aa21.39■■□□□ 1.01
PAX6-228ENST00000533333 NLRP13Q86W25 1043 aa21.38■■□□□ 1.01
PAX6-228ENST00000533333 BAZ1BQ9UIG0 1483 aaKnown RBP21.38■■□□□ 1.01
PAX6-228ENST00000533333 H0YHG0 523 aa21.37■■□□□ 1.01
PAX6-228ENST00000533333 ANKRD30AQ9BXX3 1397 aa21.37■■□□□ 1.01
PAX6-228ENST00000533333 NEFHP12036 1026 aa21.37■■□□□ 1.01
PAX6-228ENST00000533333 ZRSR2Q15696 482 aaKnown RBP21.37■■□□□ 1.01
PAX6-228ENST00000533333 NEUROD6Q96NK8 337 aa21.37■■□□□ 1.01
PAX6-228ENST00000533333 FAM13BQ9NYF5 915 aa21.37■■□□□ 1.01
PAX6-228ENST00000533333 CARMIL2Q6F5E8 1435 aa21.37■■□□□ 1.01
PAX6-228ENST00000533333 PLCD4Q9BRC7 762 aa21.36■■□□□ 1.01
PAX6-228ENST00000533333 XBP1P17861 261 aa21.36■■□□□ 1.01
PAX6-228ENST00000533333 SYCP1Q15431 976 aa21.36■■□□□ 1.01
PAX6-228ENST00000533333 FAM161AQ3B820 660 aa21.36■■□□□ 1.01
PAX6-228ENST00000533333 CENPQQ7L2Z9 268 aaPredicted RBP21.36■■□□□ 1.01
PAX6-228ENST00000533333 CGNL1Q0VF96 1302 aa21.36■■□□□ 1.01
PAX6-228ENST00000533333 PSME1Q06323 249 aa21.34■■□□□ 1.01
PAX6-228ENST00000533333 ANKRD62A6NC57 917 aa21.34■■□□□ 1.01
PAX6-228ENST00000533333 PLIN1O60240 522 aa21.34■■□□□ 1.01
PAX6-228ENST00000533333 FKBP5Q13451 457 aaPredicted RBP21.33■■□□□ 1
PAX6-228ENST00000533333 CDK5RAP3Q96JB5 506 aa21.33■■□□□ 1
PAX6-228ENST00000533333 PHLDB1Q86UU1 1377 aa21.32■■□□□ 1
PAX6-228ENST00000533333 MYO15BQ96JP2 1530 aa21.31■■□□□ 1
PAX6-228ENST00000533333 ERCC4Q92889 916 aaPredicted RBP21.31■■□□□ 1
PAX6-228ENST00000533333 HNRNPMP52272 730 aaKnown RBP eCLIP21.31■■□□□ 1
PAX6-228ENST00000533333 NAT10Q9H0A0 1025 aaKnown RBP21.3■■□□□ 1
PAX6-228ENST00000533333 KRT18P05783 430 aaKnown RBP21.3■■□□□ 1
PAX6-228ENST00000533333 PPP1R1BQ9UD71 204 aaPredicted RBP21.3■■□□□ 1
PAX6-228ENST00000533333 ERC2O15083 957 aa21.3■■□□□ 1
PAX6-228ENST00000533333 CARMIL1Q5VZK9 1371 aa21.3■■□□□ 1
PAX6-228ENST00000533333 RIC3Q7Z5B4 369 aa21.3■■□□□ 1
PAX6-228ENST00000533333 COG6Q9Y2V7 657 aa21.3■■□□□ 1
PAX6-228ENST00000533333 CCDC97Q96F63 343 aaPredicted RBP21.29■■□□□ 1
PAX6-228ENST00000533333 WASHC2AQ641Q2 1341 aa21.29■■□□□ 1
PAX6-228ENST00000533333 GSE1Q14687 1217 aa21.29■■□□□ 1
PAX6-228ENST00000533333 E9PSI1 815 aa21.28■■□□□ 1
PAX6-228ENST00000533333 AIMP1Q12904 312 aaKnown RBP21.28■■□□□ 1
PAX6-228ENST00000533333 MAGEC2Q9UBF1 373 aaPredicted RBP21.28■■□□□ 1
PAX6-228ENST00000533333 PDCL3Q9H2J4 239 aa21.28■■□□□ 1
PAX6-228ENST00000533333 SEPT7Q16181 437 aaKnown RBP21.27■■□□□ 1
PAX6-228ENST00000533333 HSP90AB4PQ58FF6 505 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms