RNA–Protein interactions for RNA: ENST00000533286.5

LINC00964-209, long intergenic non-protein coding RNA 964, humanhuman

TSL 3

Gene LINC00964, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00964-209ENST00000533286 KANK1Q14678 1352 aa12.55□□□□□ -0.4
LINC00964-209ENST00000533286 IQGAP1P46940 1657 aa12.54□□□□□ -0.4
LINC00964-209ENST00000533286 NPHP4O75161 1426 aaPredicted RBP12.54□□□□□ -0.4
LINC00964-209ENST00000533286 CCER1Q8TC90 406 aaPredicted RBP12.54□□□□□ -0.4
LINC00964-209ENST00000533286 CPS1P31327 1500 aa12.53□□□□□ -0.4
LINC00964-209ENST00000533286 ALKQ9UM73 1620 aa12.53□□□□□ -0.4
LINC00964-209ENST00000533286 ARHGAP31Q2M1Z3 1444 aa12.53□□□□□ -0.4
LINC00964-209ENST00000533286 SAMD1Q6SPF0 538 aaPredicted RBP12.52□□□□□ -0.41
LINC00964-209ENST00000533286 NUP155O75694 1391 aa12.52□□□□□ -0.41
LINC00964-209ENST00000533286 LTKP29376 864 aa12.5□□□□□ -0.41
LINC00964-209ENST00000533286 ARHGAP23Q9P227 1491 aa12.5□□□□□ -0.41
LINC00964-209ENST00000533286 PIK3C2BO00750 1634 aa12.5□□□□□ -0.41
LINC00964-209ENST00000533286 SLIT1O75093 1534 aa12.48□□□□□ -0.41
LINC00964-209ENST00000533286 LMTK2Q8IWU2 1503 aa12.48□□□□□ -0.41
LINC00964-209ENST00000533286 MPHOSPH9Q99550 1183 aa12.48□□□□□ -0.41
LINC00964-209ENST00000533286 LRRC7Q96NW7 1537 aa12.47□□□□□ -0.41
LINC00964-209ENST00000533286 XIRP1Q702N8 1843 aaKnown RBP12.47□□□□□ -0.41
LINC00964-209ENST00000533286 DSG3P32926 999 aa12.47□□□□□ -0.41
LINC00964-209ENST00000533286 HSPA1LP34931 641 aa12.47□□□□□ -0.41
LINC00964-209ENST00000533286 SYNMO15061 1565 aa12.47□□□□□ -0.41
LINC00964-209ENST00000533286 SCAF11Q99590 1463 aaKnown RBP12.46□□□□□ -0.41
LINC00964-209ENST00000533286 PIP4K2BP78356 416 aa12.46□□□□□ -0.41
LINC00964-209ENST00000533286 TOM1O60784 492 aa12.45□□□□□ -0.42
LINC00964-209ENST00000533286 IDI1Q13907 227 aa12.45□□□□□ -0.42
LINC00964-209ENST00000533286 TXNDC2Q86VQ3 553 aa12.45□□□□□ -0.42
LINC00964-209ENST00000533286 DHX57Q6P158 1386 aaKnown RBP12.44□□□□□ -0.42
LINC00964-209ENST00000533286 UNC13BO14795 1591 aa12.44□□□□□ -0.42
LINC00964-209ENST00000533286 KDM5AP29375 1690 aaKnown RBP12.44□□□□□ -0.42
LINC00964-209ENST00000533286 NOS1P29475 1434 aa12.44□□□□□ -0.42
LINC00964-209ENST00000533286 EFCAB6Q5THR3 1501 aa12.43□□□□□ -0.42
LINC00964-209ENST00000533286 SOCS7O14512 581 aa12.43□□□□□ -0.42
LINC00964-209ENST00000533286 TMEM2Q9UHN6 1383 aa12.43□□□□□ -0.42
LINC00964-209ENST00000533286 MYO5BQ9ULV0 1848 aa12.41□□□□□ -0.42
LINC00964-209ENST00000533286 CLSPNQ9HAW4 1339 aa12.41□□□□□ -0.42
LINC00964-209ENST00000533286 ZNF219Q9P2Y4 722 aaPredicted RBP12.41□□□□□ -0.42
LINC00964-209ENST00000533286 TET3O43151 1660 aa12.41□□□□□ -0.42
LINC00964-209ENST00000533286 IQGAP3Q86VI3 1631 aa12.4□□□□□ -0.42
LINC00964-209ENST00000533286 MED1Q15648 1581 aaPredicted RBP12.39□□□□□ -0.43
LINC00964-209ENST00000533286 ABCB7O75027 752 aa12.39□□□□□ -0.43
LINC00964-209ENST00000533286 ADGRB3O60242 1522 aa12.38□□□□□ -0.43
LINC00964-209ENST00000533286 EID1Q9Y6B2 187 aa12.38□□□□□ -0.43
LINC00964-209ENST00000533286 STAG3Q9UJ98 1225 aa12.37□□□□□ -0.43
LINC00964-209ENST00000533286 ATF5Q9Y2D1 282 aaPredicted RBP12.37□□□□□ -0.43
LINC00964-209ENST00000533286 E9PCH4 1651 aa12.36□□□□□ -0.43
LINC00964-209ENST00000533286 RPRD2Q5VT52 1461 aaKnown RBP12.36□□□□□ -0.43
LINC00964-209ENST00000533286 NEUROD1Q13562 356 aa12.36□□□□□ -0.43
LINC00964-209ENST00000533286 SLC26A8Q96RN1 970 aa12.36□□□□□ -0.43
LINC00964-209ENST00000533286 ZEB1P37275 1124 aaPredicted RBP12.35□□□□□ -0.43
LINC00964-209ENST00000533286 SLC52A1Q9NWF4 448 aa12.35□□□□□ -0.43
LINC00964-209ENST00000533286 TMEM131LA2VDJ0 1609 aa12.35□□□□□ -0.43
LINC00964-209ENST00000533286 ZFYVE9O95405 1425 aa12.35□□□□□ -0.43
LINC00964-209ENST00000533286 KCNA6P17658 529 aa12.34□□□□□ -0.43
LINC00964-209ENST00000533286 TMEM94Q12767 1356 aa12.33□□□□□ -0.44
LINC00964-209ENST00000533286 RBM33Q96EV2 1170 aaKnown RBP12.33□□□□□ -0.44
LINC00964-209ENST00000533286 NWD1Q149M9 1564 aa12.33□□□□□ -0.44
LINC00964-209ENST00000533286 CHD2O14647 1828 aaKnown RBP12.32□□□□□ -0.44
LINC00964-209ENST00000533286 ANKRD30BQ9BXX2 1392 aa12.31□□□□□ -0.44
LINC00964-209ENST00000533286 CCDC144AA2RUR9 1427 aa12.31□□□□□ -0.44
LINC00964-209ENST00000533286 SIN3AQ96ST3 1273 aa12.31□□□□□ -0.44
LINC00964-209ENST00000533286 RIMS2Q9UQ26 1411 aa12.3□□□□□ -0.44
LINC00964-209ENST00000533286 TONSLQ96HA7 1378 aa12.3□□□□□ -0.44
LINC00964-209ENST00000533286 PLEKHG1Q9ULL1 1385 aa12.3□□□□□ -0.44
LINC00964-209ENST00000533286 FAM135BQ49AJ0 1406 aa12.28□□□□□ -0.44
LINC00964-209ENST00000533286 CHGAP10645 457 aaKnown RBP12.28□□□□□ -0.44
LINC00964-209ENST00000533286 PROSER2Q86WR7 435 aaPredicted RBP12.28□□□□□ -0.44
LINC00964-209ENST00000533286 ROBO1Q9Y6N7 1651 aa12.28□□□□□ -0.44
LINC00964-209ENST00000533286 NKTRP30414 1462 aaKnown RBP12.27□□□□□ -0.44
LINC00964-209ENST00000533286 NUTM2DQ5VT03 806 aaPredicted RBP12.27□□□□□ -0.45
LINC00964-209ENST00000533286 TIMELESSQ9UNS1 1208 aa12.27□□□□□ -0.45
LINC00964-209ENST00000533286 ADAMTS13Q76LX8 1427 aa12.27□□□□□ -0.45
LINC00964-209ENST00000533286 BCANQ96GW7 911 aa12.26□□□□□ -0.45
LINC00964-209ENST00000533286 RGS17Q9UGC6 210 aaPredicted RBP12.26□□□□□ -0.45
LINC00964-209ENST00000533286 TRPM2O94759 1503 aa12.26□□□□□ -0.45
LINC00964-209ENST00000533286 SPHKAPQ2M3C7 1700 aa12.25□□□□□ -0.45
LINC00964-209ENST00000533286 TBX22Q9Y458 520 aa12.25□□□□□ -0.45
LINC00964-209ENST00000533286 RGL3Q3MIN7 710 aa12.24□□□□□ -0.45
LINC00964-209ENST00000533286 ZNF326Q5BKZ1 582 aaKnown RBP12.24□□□□□ -0.45
LINC00964-209ENST00000533286 NRXN3Q9Y4C0 1643 aa12.23□□□□□ -0.45
LINC00964-209ENST00000533286 PPP1R15AO75807 674 aaPredicted RBP12.23□□□□□ -0.45
LINC00964-209ENST00000533286 PTPRUQ92729 1446 aa12.22□□□□□ -0.45
LINC00964-209ENST00000533286 HDGFP51858 240 aaKnown RBP12.22□□□□□ -0.45
LINC00964-209ENST00000533286 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.22□□□□□ -0.45
LINC00964-209ENST00000533286 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.21□□□□□ -0.45
LINC00964-209ENST00000533286 SLAIN2Q9P270 581 aa12.21□□□□□ -0.45
LINC00964-209ENST00000533286 MSH6P52701 1360 aa12.2□□□□□ -0.46
LINC00964-209ENST00000533286 KDM2AQ9Y2K7 1162 aa12.2□□□□□ -0.46
LINC00964-209ENST00000533286 DIP2AQ14689 1571 aa12.2□□□□□ -0.46
LINC00964-209ENST00000533286 PHLPP1O60346 1717 aa12.2□□□□□ -0.46
LINC00964-209ENST00000533286 CLTCL1P53675 1640 aa12.19□□□□□ -0.46
LINC00964-209ENST00000533286 POLA2Q14181 598 aa12.19□□□□□ -0.46
LINC00964-209ENST00000533286 DCAF11Q8TEB1 546 aa12.19□□□□□ -0.46
LINC00964-209ENST00000533286 L3MBTL2Q969R5 705 aa12.19□□□□□ -0.46
LINC00964-209ENST00000533286 NCOA3Q9Y6Q9 1424 aa12.19□□□□□ -0.46
LINC00964-209ENST00000533286 PIK3R4Q99570 1358 aa12.18□□□□□ -0.46
LINC00964-209ENST00000533286 COL16A1Q07092 1604 aaPredicted RBP12.18□□□□□ -0.46
LINC00964-209ENST00000533286 XRN1Q8IZH2 1706 aaKnown RBP12.17□□□□□ -0.46
LINC00964-209ENST00000533286 RPGRIP1LQ68CZ1 1315 aa12.17□□□□□ -0.46
LINC00964-209ENST00000533286 KIF1BO60333 1816 aa12.17□□□□□ -0.46
LINC00964-209ENST00000533286 STAC3Q96MF2 364 aa12.17□□□□□ -0.46
LINC00964-209ENST00000533286 AMOTL2Q9Y2J4 779 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms