RNA–Protein interactions for RNA: ENST00000532781.1

ARID1A-208, Transcript of AT-rich interaction domain 1A, humanhuman

TSL 1 (best)

Gene ARID1A, Length 2,583 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1A-208ENST00000532781 IFT172Q9UG01 1749 aa19.23■□□□□ 0.67
ARID1A-208ENST00000532781 FBXO31Q5XUX0 539 aaPredicted RBP19.22■□□□□ 0.67
ARID1A-208ENST00000532781 SYNMO15061 1565 aa19.21■□□□□ 0.67
ARID1A-208ENST00000532781 ARID4BQ4LE39 1312 aaPredicted RBP19.21■□□□□ 0.67
ARID1A-208ENST00000532781 ADGRB3O60242 1522 aa19.2■□□□□ 0.66
ARID1A-208ENST00000532781 TMEM132EQ6IEE7 984 aa19.19■□□□□ 0.66
ARID1A-208ENST00000532781 MYO5BQ9ULV0 1848 aa19.18■□□□□ 0.66
ARID1A-208ENST00000532781 CC2D1BQ5T0F9 858 aaKnown RBP19.18■□□□□ 0.66
ARID1A-208ENST00000532781 PANK3Q9H999 370 aa19.18■□□□□ 0.66
ARID1A-208ENST00000532781 TMF1P82094 1093 aa19.17■□□□□ 0.66
ARID1A-208ENST00000532781 IDI1Q13907 227 aa19.17■□□□□ 0.66
ARID1A-208ENST00000532781 SUPT16HQ9Y5B9 1047 aaKnown RBP19.17■□□□□ 0.66
ARID1A-208ENST00000532781 BCANQ96GW7 911 aa19.16■□□□□ 0.66
ARID1A-208ENST00000532781 PPLO60437 1756 aa19.16■□□□□ 0.66
ARID1A-208ENST00000532781 SCAF11Q99590 1463 aaKnown RBP19.16■□□□□ 0.66
ARID1A-208ENST00000532781 ZMYM4Q5VZL5 1548 aa19.15■□□□□ 0.66
ARID1A-208ENST00000532781 PER1O15534 1290 aaPredicted RBP19.14■□□□□ 0.65
ARID1A-208ENST00000532781 TRAK1Q9UPV9 953 aa19.14■□□□□ 0.65
ARID1A-208ENST00000532781 MYOM2P54296 1465 aa19.13■□□□□ 0.65
ARID1A-208ENST00000532781 PREX1Q8TCU6 1659 aa19.11■□□□□ 0.65
ARID1A-208ENST00000532781 PIK3C2BO00750 1634 aa19.1■□□□□ 0.65
ARID1A-208ENST00000532781 CLTCQ00610 1675 aaKnown RBP19.1■□□□□ 0.65
ARID1A-208ENST00000532781 KIAA1210Q9ULL0 1709 aa19.1■□□□□ 0.65
ARID1A-208ENST00000532781 FKBP8Q14318 412 aa19.09■□□□□ 0.65
ARID1A-208ENST00000532781 TMC1Q8TDI8 760 aa19.09■□□□□ 0.65
ARID1A-208ENST00000532781 NEURL4Q96JN8 1562 aa19.09■□□□□ 0.65
ARID1A-208ENST00000532781 ZC3H13Q5T200 1668 aaKnown RBP19.08■□□□□ 0.65
ARID1A-208ENST00000532781 NRXN1Q9ULB1 1477 aa19.08■□□□□ 0.65
ARID1A-208ENST00000532781 IRX6P78412 446 aaPredicted RBP19.08■□□□□ 0.64
ARID1A-208ENST00000532781 PIK3C2GO75747 1445 aa19.08■□□□□ 0.64
ARID1A-208ENST00000532781 SAFB2Q14151 953 aaKnown RBP eCLIP19.07■□□□□ 0.64
ARID1A-208ENST00000532781 MYOM1P52179 1685 aa19.06■□□□□ 0.64
ARID1A-208ENST00000532781 NEXMIFQ5QGS0 1516 aa19.06■□□□□ 0.64
ARID1A-208ENST00000532781 KTN1Q86UP2 1357 aaKnown RBP19.05■□□□□ 0.64
ARID1A-208ENST00000532781 MYBBP1AQ9BQG0 1328 aaKnown RBP19.04■□□□□ 0.64
ARID1A-208ENST00000532781 PNISRQ8TF01 805 aaKnown RBP19.04■□□□□ 0.64
ARID1A-208ENST00000532781 STAC3Q96MF2 364 aa19.04■□□□□ 0.64
ARID1A-208ENST00000532781 ARHGAP31Q2M1Z3 1444 aa19.04■□□□□ 0.64
ARID1A-208ENST00000532781 ERVK-7P63135 1459 aa19.03■□□□□ 0.64
ARID1A-208ENST00000532781 C14orf93Q9H972 538 aaKnown RBP19.03■□□□□ 0.64
ARID1A-208ENST00000532781 STK26Q9P289 416 aa19.03■□□□□ 0.64
ARID1A-208ENST00000532781 SALL2Q9Y467 1007 aaPredicted RBP19.03■□□□□ 0.64
ARID1A-208ENST00000532781 EIF3AQ14152 1382 aaKnown RBP19.02■□□□□ 0.64
ARID1A-208ENST00000532781 PARD3Q8TEW0 1356 aa19.02■□□□□ 0.64
ARID1A-208ENST00000532781 ADGRB1O14514 1584 aa19.02■□□□□ 0.64
ARID1A-208ENST00000532781 PLPPR3Q6T4P5 718 aa19.01■□□□□ 0.63
ARID1A-208ENST00000532781 TMEM131LA2VDJ0 1609 aa19.01■□□□□ 0.63
ARID1A-208ENST00000532781 RALBP1Q15311 655 aa19■□□□□ 0.63
ARID1A-208ENST00000532781 KDM5AP29375 1690 aaKnown RBP19■□□□□ 0.63
ARID1A-208ENST00000532781 STAG3Q9UJ98 1225 aa18.99■□□□□ 0.63
ARID1A-208ENST00000532781 ARHGEF40Q8TER5 1519 aa18.99■□□□□ 0.63
ARID1A-208ENST00000532781 CENPJQ9HC77 1338 aaPredicted RBP18.99■□□□□ 0.63
ARID1A-208ENST00000532781 QRICH2Q9H0J4 1663 aa18.99■□□□□ 0.63
ARID1A-208ENST00000532781 SLC52A1Q9NWF4 448 aa18.97■□□□□ 0.63
ARID1A-208ENST00000532781 KNSTRNQ9Y448 316 aa18.97■□□□□ 0.63
ARID1A-208ENST00000532781 ZBED9Q6R2W3 1325 aa18.97■□□□□ 0.63
ARID1A-208ENST00000532781 VGFO15240 615 aaPredicted RBP18.96■□□□□ 0.63
ARID1A-208ENST00000532781 RPGRIP1LQ68CZ1 1315 aa18.96■□□□□ 0.63
ARID1A-208ENST00000532781 SETBP1Q9Y6X0 1596 aa18.96■□□□□ 0.63
ARID1A-208ENST00000532781 AMER1Q5JTC6 1135 aaPredicted RBP18.95■□□□□ 0.62
ARID1A-208ENST00000532781 NLRP13Q86W25 1043 aa18.95■□□□□ 0.62
ARID1A-208ENST00000532781 CARD14Q9BXL6 1004 aa18.95■□□□□ 0.62
ARID1A-208ENST00000532781 BRD4O60885 1362 aaPredicted RBP18.95■□□□□ 0.62
ARID1A-208ENST00000532781 ASXL1Q8IXJ9 1541 aa18.95■□□□□ 0.62
ARID1A-208ENST00000532781 TRHP20396 242 aaPredicted RBP18.94■□□□□ 0.62
ARID1A-208ENST00000532781 AGLP35573 1532 aa18.94■□□□□ 0.62
ARID1A-208ENST00000532781 REREQ9P2R6 1566 aa18.94■□□□□ 0.62
ARID1A-208ENST00000532781 MYO3AQ8NEV4 1616 aa18.94■□□□□ 0.62
ARID1A-208ENST00000532781 ARHGEF28Q8N1W1 1705 aaKnown RBP18.93■□□□□ 0.62
ARID1A-208ENST00000532781 SLC12A5Q9H2X9 1139 aa18.93■□□□□ 0.62
ARID1A-208ENST00000532781 CDCA8Q53HL2 280 aa18.92■□□□□ 0.62
ARID1A-208ENST00000532781 NEFLP07196 543 aa18.9■□□□□ 0.62
ARID1A-208ENST00000532781 CEBPAP49715 358 aaPredicted RBP18.9■□□□□ 0.62
ARID1A-208ENST00000532781 ESF1Q9H501 851 aaKnown RBP18.9■□□□□ 0.62
ARID1A-208ENST00000532781 LRPPRCP42704 1394 aaKnown RBP18.9■□□□□ 0.62
ARID1A-208ENST00000532781 CABP2Q9NPB3 220 aa18.9■□□□□ 0.62
ARID1A-208ENST00000532781 ZMYM3Q14202 1370 aa18.89■□□□□ 0.62
ARID1A-208ENST00000532781 PPP2R1AP30153 589 aa18.88■□□□□ 0.61
ARID1A-208ENST00000532781 TNNT2P45379 298 aaPredicted RBP18.88■□□□□ 0.61
ARID1A-208ENST00000532781 MINK1Q8N4C8 1332 aaPredicted RBP18.87■□□□□ 0.61
ARID1A-208ENST00000532781 TULP4Q9NRJ4 1543 aa18.86■□□□□ 0.61
ARID1A-208ENST00000532781 SPATA31D1Q6ZQQ2 1576 aa18.86■□□□□ 0.61
ARID1A-208ENST00000532781 A2ML1A8K2U0 1454 aa18.86■□□□□ 0.61
ARID1A-208ENST00000532781 PRAM1Q96QH2 718 aa18.86■□□□□ 0.61
ARID1A-208ENST00000532781 ALKQ9UM73 1620 aa18.83■□□□□ 0.61
ARID1A-208ENST00000532781 SBNO2Q9Y2G9 1366 aa18.83■□□□□ 0.6
ARID1A-208ENST00000532781 ADAMTS8Q9UP79 889 aa18.83■□□□□ 0.6
ARID1A-208ENST00000532781 NSD3Q9BZ95 1437 aa18.82■□□□□ 0.6
ARID1A-208ENST00000532781 WAPLQ7Z5K2 1190 aa18.82■□□□□ 0.6
ARID1A-208ENST00000532781 RIMS2Q9UQ26 1411 aa18.82■□□□□ 0.6
ARID1A-208ENST00000532781 ZFYVE9O95405 1425 aa18.81■□□□□ 0.6
ARID1A-208ENST00000532781 YTHDC2Q9H6S0 1430 aaKnown RBP18.81■□□□□ 0.6
ARID1A-208ENST00000532781 PTPRMP28827 1452 aa18.81■□□□□ 0.6
ARID1A-208ENST00000532781 SRPK2P78362 688 aaKnown RBP18.8■□□□□ 0.6
ARID1A-208ENST00000532781 CDCA7LQ96GN5 454 aa18.8■□□□□ 0.6
ARID1A-208ENST00000532781 POGKQ9P215 609 aa18.8■□□□□ 0.6
ARID1A-208ENST00000532781 PPP6R1Q9UPN7 881 aa18.8■□□□□ 0.6
ARID1A-208ENST00000532781 PLEKHH1Q9ULM0 1364 aa18.79■□□□□ 0.6
ARID1A-208ENST00000532781 EVC2Q86UK5 1308 aa18.78■□□□□ 0.6
ARID1A-208ENST00000532781 CCDC146Q8IYE0 955 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms