RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 ABCC10Q5T3U5 1492 aa8.7□□□□□ -1.02
TGFBR3-209ENST00000532540 TTC37Q6PGP7 1564 aa8.7□□□□□ -1.02
TGFBR3-209ENST00000532540 WAPLQ7Z5K2 1190 aa8.69□□□□□ -1.02
TGFBR3-209ENST00000532540 ZNF518AQ6AHZ1 1483 aa8.69□□□□□ -1.02
TGFBR3-209ENST00000532540 POGZQ7Z3K3 1410 aa8.69□□□□□ -1.02
TGFBR3-209ENST00000532540 WASHC2AQ641Q2 1341 aa8.69□□□□□ -1.02
TGFBR3-209ENST00000532540 KDM4FA0A1W2PPD8 638 aa8.69□□□□□ -1.02
TGFBR3-209ENST00000532540 SLC4A3P48751 1232 aa8.69□□□□□ -1.02
TGFBR3-209ENST00000532540 A2MP01023 1474 aa8.69□□□□□ -1.02
TGFBR3-209ENST00000532540 RBM10P98175 930 aaKnown RBP8.69□□□□□ -1.02
TGFBR3-209ENST00000532540 PROSER2Q86WR7 435 aaPredicted RBP8.68□□□□□ -1.02
TGFBR3-209ENST00000532540 ANKLE2Q86XL3 938 aa8.68□□□□□ -1.02
TGFBR3-209ENST00000532540 UHRF1BP1LA0JNW5 1464 aa8.68□□□□□ -1.02
TGFBR3-209ENST00000532540 NCKAP5LQ9HCH0 1330 aa8.68□□□□□ -1.02
TGFBR3-209ENST00000532540 ADGRF5Q8IZF2 1346 aa8.68□□□□□ -1.02
TGFBR3-209ENST00000532540 ARHGEF12Q9NZN5 1544 aa8.68□□□□□ -1.02
TGFBR3-209ENST00000532540 MS4A1P11836 297 aa8.68□□□□□ -1.02
TGFBR3-209ENST00000532540 CANXP27824 592 aaKnown RBP8.68□□□□□ -1.02
TGFBR3-209ENST00000532540 GZF1Q9H116 711 aaPredicted RBP8.68□□□□□ -1.02
TGFBR3-209ENST00000532540 CFAP65Q6ZU64 1925 aaKnown RBP8.68□□□□□ -1.02
TGFBR3-209ENST00000532540 PMFBP1Q8TBY8 1022 aa8.67□□□□□ -1.02
TGFBR3-209ENST00000532540 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.67□□□□□ -1.02
TGFBR3-209ENST00000532540 TPM2P07951 284 aa8.67□□□□□ -1.02
TGFBR3-209ENST00000532540 NGDNQ8NEJ9 315 aaKnown RBP8.67□□□□□ -1.02
TGFBR3-209ENST00000532540 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.67□□□□□ -1.02
TGFBR3-209ENST00000532540 MAP7D2Q96T17 732 aa8.67□□□□□ -1.02
TGFBR3-209ENST00000532540 CABP2Q9NPB3 220 aa8.67□□□□□ -1.02
TGFBR3-209ENST00000532540 NUDCQ9Y266 331 aa8.67□□□□□ -1.02
TGFBR3-209ENST00000532540 ZMYM3Q14202 1370 aa8.67□□□□□ -1.02
TGFBR3-209ENST00000532540 ILDR1Q86SU0 546 aaPredicted RBP8.66□□□□□ -1.02
TGFBR3-209ENST00000532540 DNTTIP2Q5QJE6 756 aaKnown RBP8.66□□□□□ -1.02
TGFBR3-209ENST00000532540 PRAM1Q96QH2 718 aa8.66□□□□□ -1.02
TGFBR3-209ENST00000532540 SLC52A1Q9NWF4 448 aa8.66□□□□□ -1.02
TGFBR3-209ENST00000532540 COL17A1Q9UMD9 1497 aaPredicted RBP8.66□□□□□ -1.02
TGFBR3-209ENST00000532540 RGS3P49796 1198 aa8.65□□□□□ -1.02
TGFBR3-209ENST00000532540 SLKQ9H2G2 1235 aaPredicted RBP8.65□□□□□ -1.02
TGFBR3-209ENST00000532540 MAP3K1Q13233 1512 aa8.65□□□□□ -1.02
TGFBR3-209ENST00000532540 TMF1P82094 1093 aa8.65□□□□□ -1.03
TGFBR3-209ENST00000532540 ZBED9Q6R2W3 1325 aa8.65□□□□□ -1.03
TGFBR3-209ENST00000532540 NEUROD2Q15784 382 aa8.64□□□□□ -1.03
TGFBR3-209ENST00000532540 FAM13BQ9NYF5 915 aa8.64□□□□□ -1.03
TGFBR3-209ENST00000532540 KNSTRNQ9Y448 316 aa8.64□□□□□ -1.03
TGFBR3-209ENST00000532540 ERBINQ96RT1 1412 aa8.64□□□□□ -1.03
TGFBR3-209ENST00000532540 KIAA1107Q9UPP5 1409 aa8.64□□□□□ -1.03
TGFBR3-209ENST00000532540 LTV1Q96GA3 475 aaPredicted RBP8.64□□□□□ -1.03
TGFBR3-209ENST00000532540 GOLGA6L22H0YM25 854 aa8.63□□□□□ -1.03
TGFBR3-209ENST00000532540 PDIA4P13667 645 aaKnown RBP8.63□□□□□ -1.03
TGFBR3-209ENST00000532540 MBD5Q9P267 1494 aa8.63□□□□□ -1.03
TGFBR3-209ENST00000532540 FRAT2O75474 233 aaPredicted RBP8.63□□□□□ -1.03
TGFBR3-209ENST00000532540 ROCK1Q13464 1354 aa8.63□□□□□ -1.03
TGFBR3-209ENST00000532540 PDCL3Q9H2J4 239 aa8.63□□□□□ -1.03
TGFBR3-209ENST00000532540 ESCO1Q5FWF5 840 aa8.62□□□□□ -1.03
TGFBR3-209ENST00000532540 TNRQ92752 1358 aa8.61□□□□□ -1.03
TGFBR3-209ENST00000532540 KIF13AQ9H1H9 1805 aa8.61□□□□□ -1.03
TGFBR3-209ENST00000532540 PTMAP06454 111 aaKnown RBP8.61□□□□□ -1.03
TGFBR3-209ENST00000532540 AMOTL2Q9Y2J4 779 aa8.61□□□□□ -1.03
TGFBR3-209ENST00000532540 ATP10AO60312 1499 aa8.61□□□□□ -1.03
TGFBR3-209ENST00000532540 ATF3P18847 181 aa8.61□□□□□ -1.03
TGFBR3-209ENST00000532540 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.61□□□□□ -1.03
TGFBR3-209ENST00000532540 MTERF4Q7Z6M4 381 aaKnown RBP8.6□□□□□ -1.03
TGFBR3-209ENST00000532540 CCDC9Q9Y3X0 531 aaKnown RBP8.6□□□□□ -1.03
TGFBR3-209ENST00000532540 U2SURPO15042 1029 aaKnown RBP8.6□□□□□ -1.03
TGFBR3-209ENST00000532540 LTKP29376 864 aa8.6□□□□□ -1.03
TGFBR3-209ENST00000532540 SAMD9LQ8IVG5 1584 aa8.59□□□□□ -1.03
TGFBR3-209ENST00000532540 BACH2Q9BYV9 841 aa8.59□□□□□ -1.03
TGFBR3-209ENST00000532540 SLC12A5Q9H2X9 1139 aa8.59□□□□□ -1.03
TGFBR3-209ENST00000532540 SHROOM2Q13796 1616 aa8.59□□□□□ -1.03
TGFBR3-209ENST00000532540 ANKRD30BQ9BXX2 1392 aa8.59□□□□□ -1.03
TGFBR3-209ENST00000532540 NUTM2BA6NNL0 878 aaPredicted RBP8.59□□□□□ -1.03
TGFBR3-209ENST00000532540 NUTM2EB1AL46 878 aaPredicted RBP8.59□□□□□ -1.03
TGFBR3-209ENST00000532540 NUTM2AQ8IVF1 878 aaPredicted RBP8.59□□□□□ -1.03
TGFBR3-209ENST00000532540 PPP6R1Q9UPN7 881 aa8.59□□□□□ -1.03
TGFBR3-209ENST00000532540 ATP7AQ04656 1500 aa8.59□□□□□ -1.03
TGFBR3-209ENST00000532540 KDM6BO15054 1643 aa8.59□□□□□ -1.03
TGFBR3-209ENST00000532540 NEO1Q92859 1461 aa8.59□□□□□ -1.03
TGFBR3-209ENST00000532540 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.59□□□□□ -1.04
TGFBR3-209ENST00000532540 BBXQ8WY36 941 aaPredicted RBP8.59□□□□□ -1.04
TGFBR3-209ENST00000532540 RCAN3Q9UKA8 241 aa8.59□□□□□ -1.04
TGFBR3-209ENST00000532540 USP47Q96K76 1375 aa8.58□□□□□ -1.04
TGFBR3-209ENST00000532540 CFAP43Q8NDM7 1665 aa8.58□□□□□ -1.04
TGFBR3-209ENST00000532540 PANK3Q9H999 370 aa8.58□□□□□ -1.04
TGFBR3-209ENST00000532540 NOS1P29475 1434 aa8.58□□□□□ -1.04
TGFBR3-209ENST00000532540 FOXO3O43524 673 aa8.58□□□□□ -1.04
TGFBR3-209ENST00000532540 PSME1Q06323 249 aa8.58□□□□□ -1.04
TGFBR3-209ENST00000532540 CENPJQ9HC77 1338 aaPredicted RBP8.58□□□□□ -1.04
TGFBR3-209ENST00000532540 EXOC6Q8TAG9 804 aa8.57□□□□□ -1.04
TGFBR3-209ENST00000532540 MRE11P49959 708 aa8.57□□□□□ -1.04
TGFBR3-209ENST00000532540 FGD1P98174 961 aa8.57□□□□□ -1.04
TGFBR3-209ENST00000532540 FAM161AQ3B820 660 aa8.57□□□□□ -1.04
TGFBR3-209ENST00000532540 CDCA8Q53HL2 280 aa8.57□□□□□ -1.04
TGFBR3-209ENST00000532540 MORC1Q86VD1 984 aa8.57□□□□□ -1.04
TGFBR3-209ENST00000532540 GGNBP2Q9H3C7 697 aa8.57□□□□□ -1.04
TGFBR3-209ENST00000532540 ESPNB1AK53 854 aa8.56□□□□□ -1.04
TGFBR3-209ENST00000532540 CABP1Q9NZU7 370 aa8.56□□□□□ -1.04
TGFBR3-209ENST00000532540 CSB-PGBD3P0DP91 1061 aa8.56□□□□□ -1.04
TGFBR3-209ENST00000532540 KCNA6P17658 529 aa8.56□□□□□ -1.04
TGFBR3-209ENST00000532540 FBLN1P23142 703 aa8.56□□□□□ -1.04
TGFBR3-209ENST00000532540 HDGFL2Q7Z4V5 671 aaPredicted RBP8.56□□□□□ -1.04
TGFBR3-209ENST00000532540 SPRYD3Q8NCJ5 442 aa8.56□□□□□ -1.04
TGFBR3-209ENST00000532540 ZFYVE16Q7Z3T8 1539 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms