RNA–Protein interactions for RNA: ENST00000530866.5

LTBP3-218, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 3,756 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-218ENST00000530866 DNMT1P26358 1616 aaKnown RBP16.33■□□□□ 0.21
LTBP3-218ENST00000530866 COG6Q9Y2V7 657 aa16.33■□□□□ 0.2
LTBP3-218ENST00000530866 CD109Q6YHK3 1445 aa16.33■□□□□ 0.2
LTBP3-218ENST00000530866 ZBTB7CA1YPR0 619 aa16.33■□□□□ 0.2
LTBP3-218ENST00000530866 PPP2R1AP30153 589 aa16.32■□□□□ 0.2
LTBP3-218ENST00000530866 TCERG1O14776 1098 aaKnown RBP16.32■□□□□ 0.2
LTBP3-218ENST00000530866 FTSJ3Q8IY81 847 aaKnown RBP16.31■□□□□ 0.2
LTBP3-218ENST00000530866 ASXL2Q76L83 1435 aa16.31■□□□□ 0.2
LTBP3-218ENST00000530866 ERCC6L2Q5T890 1561 aa16.31■□□□□ 0.2
LTBP3-218ENST00000530866 CFAP53Q96M91 514 aa16.3■□□□□ 0.2
LTBP3-218ENST00000530866 UPF2Q9HAU5 1272 aaKnown RBP16.3■□□□□ 0.2
LTBP3-218ENST00000530866 C14orf37Q86TY3 774 aa16.3■□□□□ 0.2
LTBP3-218ENST00000530866 GGNBP2Q9H3C7 697 aa16.3■□□□□ 0.2
LTBP3-218ENST00000530866 PNNQ9H307 717 aaKnown RBP16.29■□□□□ 0.2
LTBP3-218ENST00000530866 CHD1O14646 1710 aa16.29■□□□□ 0.2
LTBP3-218ENST00000530866 ABCC2Q92887 1545 aa16.28■□□□□ 0.2
LTBP3-218ENST00000530866 FANCAO15360 1455 aa16.28■□□□□ 0.2
LTBP3-218ENST00000530866 ADGRL1O94910 1474 aa16.28■□□□□ 0.2
LTBP3-218ENST00000530866 BCAR3O75815 825 aa16.28■□□□□ 0.2
LTBP3-218ENST00000530866 PLCH2O75038 1416 aa16.28■□□□□ 0.2
LTBP3-218ENST00000530866 CFAP65Q6ZU64 1925 aaKnown RBP16.28■□□□□ 0.2
LTBP3-218ENST00000530866 ERBINQ96RT1 1412 aa16.28■□□□□ 0.2
LTBP3-218ENST00000530866 DHX29Q7Z478 1369 aaKnown RBP16.27■□□□□ 0.2
LTBP3-218ENST00000530866 PANK1Q8TE04 598 aa16.27■□□□□ 0.2
LTBP3-218ENST00000530866 CENPJQ9HC77 1338 aaPredicted RBP16.27■□□□□ 0.19
LTBP3-218ENST00000530866 ELL2O00472 640 aaPredicted RBP16.27■□□□□ 0.19
LTBP3-218ENST00000530866 TESK2Q96S53 571 aa16.27■□□□□ 0.19
LTBP3-218ENST00000530866 BRD4O60885 1362 aaPredicted RBP16.26■□□□□ 0.19
LTBP3-218ENST00000530866 GSE1Q14687 1217 aa16.26■□□□□ 0.19
LTBP3-218ENST00000530866 DDRGK1Q96HY6 314 aa16.25■□□□□ 0.19
LTBP3-218ENST00000530866 FAM135AQ9P2D6 1515 aa16.25■□□□□ 0.19
LTBP3-218ENST00000530866 MAPK8IP3Q9UPT6 1336 aa16.24■□□□□ 0.19
LTBP3-218ENST00000530866 FBLN1P23142 703 aa16.24■□□□□ 0.19
LTBP3-218ENST00000530866 ABCA8O94911 1581 aa16.24■□□□□ 0.19
LTBP3-218ENST00000530866 MTHFSP49914 203 aa16.24■□□□□ 0.19
LTBP3-218ENST00000530866 PDE3BQ13370 1112 aa16.24■□□□□ 0.19
LTBP3-218ENST00000530866 FBXO31Q5XUX0 539 aaPredicted RBP16.24■□□□□ 0.19
LTBP3-218ENST00000530866 EIF3AQ14152 1382 aaKnown RBP16.23■□□□□ 0.19
LTBP3-218ENST00000530866 WDR7Q9Y4E6 1490 aa16.23■□□□□ 0.19
LTBP3-218ENST00000530866 APBB1O00213 710 aa16.22■□□□□ 0.19
LTBP3-218ENST00000530866 SPATA31E1Q6ZUB1 1445 aa16.22■□□□□ 0.19
LTBP3-218ENST00000530866 GCC2Q8IWJ2 1684 aa16.22■□□□□ 0.19
LTBP3-218ENST00000530866 SMG6Q86US8 1419 aaKnown RBP16.22■□□□□ 0.19
LTBP3-218ENST00000530866 GZF1Q9H116 711 aaPredicted RBP16.22■□□□□ 0.19
LTBP3-218ENST00000530866 ITSN2Q9NZM3 1697 aa16.22■□□□□ 0.19
LTBP3-218ENST00000530866 TPRNQ4KMQ1 711 aa16.22■□□□□ 0.19
LTBP3-218ENST00000530866 PRAG1Q86YV5 1406 aa16.2■□□□□ 0.18
LTBP3-218ENST00000530866 MBD5Q9P267 1494 aa16.2■□□□□ 0.18
LTBP3-218ENST00000530866 PER1O15534 1290 aaPredicted RBP16.2■□□□□ 0.18
LTBP3-218ENST00000530866 KDM5BQ9UGL1 1544 aa16.19■□□□□ 0.18
LTBP3-218ENST00000530866 ABCC10Q5T3U5 1492 aa16.19■□□□□ 0.18
LTBP3-218ENST00000530866 VGFO15240 615 aaPredicted RBP16.19■□□□□ 0.18
LTBP3-218ENST00000530866 ITPRIPQ8IWB1 547 aa16.17■□□□□ 0.18
LTBP3-218ENST00000530866 PRAM1Q96QH2 718 aa16.17■□□□□ 0.18
LTBP3-218ENST00000530866 HMOX1P09601 288 aa16.16■□□□□ 0.18
LTBP3-218ENST00000530866 IDI1Q13907 227 aa16.16■□□□□ 0.18
LTBP3-218ENST00000530866 PDE4CQ08493 712 aa16.16■□□□□ 0.18
LTBP3-218ENST00000530866 RALGAPBQ86X10 1494 aa16.16■□□□□ 0.18
LTBP3-218ENST00000530866 LMOD2Q6P5Q4 547 aa16.15■□□□□ 0.18
LTBP3-218ENST00000530866 TCP11L2Q8N4U5 519 aa16.15■□□□□ 0.18
LTBP3-218ENST00000530866 FOXD4L1Q9NU39 408 aa16.15■□□□□ 0.18
LTBP3-218ENST00000530866 TRIM44Q96DX7 344 aaPredicted RBP16.15■□□□□ 0.18
LTBP3-218ENST00000530866 A2MP01023 1474 aa16.15■□□□□ 0.18
LTBP3-218ENST00000530866 MFAP1P55081 439 aaKnown RBP16.15■□□□□ 0.18
LTBP3-218ENST00000530866 SMC4Q9NTJ3 1288 aa16.14■□□□□ 0.18
LTBP3-218ENST00000530866 TSR2Q969E8 191 aaKnown RBP16.14■□□□□ 0.17
LTBP3-218ENST00000530866 BACH2Q9BYV9 841 aa16.14■□□□□ 0.17
LTBP3-218ENST00000530866 WAPLQ7Z5K2 1190 aa16.13■□□□□ 0.17
LTBP3-218ENST00000530866 EVC2Q86UK5 1308 aa16.13■□□□□ 0.17
LTBP3-218ENST00000530866 ADGRL2O95490 1459 aa16.13■□□□□ 0.17
LTBP3-218ENST00000530866 CGNL1Q0VF96 1302 aa16.13■□□□□ 0.17
LTBP3-218ENST00000530866 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.12■□□□□ 0.172e-10■■■■□ 23.7
LTBP3-218ENST00000530866 HDGFL2Q7Z4V5 671 aaPredicted RBP16.12■□□□□ 0.17
LTBP3-218ENST00000530866 NOS1P29475 1434 aa16.12■□□□□ 0.17
LTBP3-218ENST00000530866 BECN1Q14457 450 aa16.12■□□□□ 0.17
LTBP3-218ENST00000530866 TTC37Q6PGP7 1564 aa16.11■□□□□ 0.17
LTBP3-218ENST00000530866 CARD14Q9BXL6 1004 aa16.11■□□□□ 0.17
LTBP3-218ENST00000530866 CENPQQ7L2Z9 268 aaPredicted RBP16.11■□□□□ 0.17
LTBP3-218ENST00000530866 SPINK5Q9NQ38 1064 aaPredicted RBP16.11■□□□□ 0.17
LTBP3-218ENST00000530866 SAMD9LQ8IVG5 1584 aa16.11■□□□□ 0.17
LTBP3-218ENST00000530866 FAM161AQ3B820 660 aa16.1■□□□□ 0.17
LTBP3-218ENST00000530866 ARHGEF12Q9NZN5 1544 aa16.1■□□□□ 0.17
LTBP3-218ENST00000530866 TXNDC2Q86VQ3 553 aa16.1■□□□□ 0.17
LTBP3-218ENST00000530866 CABP1Q9NZU7 370 aa16.1■□□□□ 0.17
LTBP3-218ENST00000530866 TERF2IPQ9NYB0 399 aa16.08■□□□□ 0.17
LTBP3-218ENST00000530866 HDGFP51858 240 aaKnown RBP16.08■□□□□ 0.16
LTBP3-218ENST00000530866 CDC42BPAQ5VT25 1732 aa16.08■□□□□ 0.16
LTBP3-218ENST00000530866 DMRT2Q9Y5R5 561 aa16.08■□□□□ 0.16
LTBP3-218ENST00000530866 PLA2R1Q13018 1463 aa16.07■□□□□ 0.16
LTBP3-218ENST00000530866 USP35Q9P2H5 1018 aa16.07■□□□□ 0.16
LTBP3-218ENST00000530866 NSD3Q9BZ95 1437 aa16.06■□□□□ 0.16
LTBP3-218ENST00000530866 E9PSI1 815 aa16.06■□□□□ 0.16
LTBP3-218ENST00000530866 NUTM2GQ5VZR2 741 aa16.06■□□□□ 0.16
LTBP3-218ENST00000530866 LTV1Q96GA3 475 aaPredicted RBP16.06■□□□□ 0.16
LTBP3-218ENST00000530866 SHANK2Q9UPX8 1470 aa16.06■□□□□ 0.16
LTBP3-218ENST00000530866 BCORL1Q5H9F3 1711 aa16.06■□□□□ 0.16
LTBP3-218ENST00000530866 FRAT2O75474 233 aaPredicted RBP16.06■□□□□ 0.16
LTBP3-218ENST00000530866 NFKBIBQ15653 356 aa16.06■□□□□ 0.16
LTBP3-218ENST00000530866 THUMPD2Q9BTF0 503 aaKnown RBP16.06■□□□□ 0.16
LTBP3-218ENST00000530866 TNNQ9UQP3 1299 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms