RNA–Protein interactions for RNA: ENST00000530861.5

BDNF-215, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,918 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-215ENST00000530861 SYCP2Q9BX26 1530 aa16.28■□□□□ 0.2
BDNF-215ENST00000530861 CABP1Q9NZU7 370 aa16.28■□□□□ 0.2
BDNF-215ENST00000530861 ITPRIPQ8IWB1 547 aa16.28■□□□□ 0.2
BDNF-215ENST00000530861 TCP11L2Q8N4U5 519 aa16.27■□□□□ 0.2
BDNF-215ENST00000530861 THUMPD2Q9BTF0 503 aaKnown RBP16.27■□□□□ 0.2
BDNF-215ENST00000530861 HDGFL2Q7Z4V5 671 aaPredicted RBP16.27■□□□□ 0.19
BDNF-215ENST00000530861 PMFBP1Q8TBY8 1022 aa16.27■□□□□ 0.19
BDNF-215ENST00000530861 SMC4Q9NTJ3 1288 aa16.27■□□□□ 0.19
BDNF-215ENST00000530861 MSH5O43196 834 aa16.26■□□□□ 0.19
BDNF-215ENST00000530861 TESK2Q96S53 571 aa16.26■□□□□ 0.19
BDNF-215ENST00000530861 ERBINQ96RT1 1412 aa16.25■□□□□ 0.19
BDNF-215ENST00000530861 SLKQ9H2G2 1235 aaPredicted RBP16.25■□□□□ 0.19
BDNF-215ENST00000530861 CFAP65Q6ZU64 1925 aaKnown RBP16.25■□□□□ 0.19
BDNF-215ENST00000530861 NCKAP5LQ9HCH0 1330 aa16.24■□□□□ 0.19
BDNF-215ENST00000530861 PDE4AP27815 886 aa16.24■□□□□ 0.19
BDNF-215ENST00000530861 SAMD9Q5K651 1589 aa16.24■□□□□ 0.19
BDNF-215ENST00000530861 HSP90AA1P07900 732 aaKnown RBP16.24■□□□□ 0.19
BDNF-215ENST00000530861 ERCC6L2Q5T890 1561 aa16.23■□□□□ 0.19
BDNF-215ENST00000530861 PBRM1Q86U86 1689 aa16.22■□□□□ 0.19
BDNF-215ENST00000530861 EVC2Q86UK5 1308 aa16.22■□□□□ 0.19
BDNF-215ENST00000530861 RRS1Q15050 365 aaKnown RBP16.21■□□□□ 0.19
BDNF-215ENST00000530861 NGDNQ8NEJ9 315 aaKnown RBP16.21■□□□□ 0.19
BDNF-215ENST00000530861 EIF3AQ14152 1382 aaKnown RBP16.21■□□□□ 0.19
BDNF-215ENST00000530861 TERF2IPQ9NYB0 399 aa16.21■□□□□ 0.18
BDNF-215ENST00000530861 DENND4BO75064 1496 aaPredicted RBP16.2■□□□□ 0.18
BDNF-215ENST00000530861 CD109Q6YHK3 1445 aa16.2■□□□□ 0.18
BDNF-215ENST00000530861 RIPK4P57078 832 aa16.2■□□□□ 0.18
BDNF-215ENST00000530861 CGNL1Q0VF96 1302 aa16.2■□□□□ 0.18
BDNF-215ENST00000530861 SPINK5Q9NQ38 1064 aaPredicted RBP16.2■□□□□ 0.18
BDNF-215ENST00000530861 TCOF1Q13428 1488 aaKnown RBP16.2■□□□□ 0.18
BDNF-215ENST00000530861 CARD14Q9BXL6 1004 aa16.19■□□□□ 0.18
BDNF-215ENST00000530861 TNNQ9UQP3 1299 aa16.19■□□□□ 0.18
BDNF-215ENST00000530861 ADGRL1O94910 1474 aa16.19■□□□□ 0.18
BDNF-215ENST00000530861 NUP160Q12769 1436 aa16.19■□□□□ 0.18
BDNF-215ENST00000530861 BRD4O60885 1362 aaPredicted RBP16.18■□□□□ 0.18
BDNF-215ENST00000530861 PER1O15534 1290 aaPredicted RBP16.18■□□□□ 0.18
BDNF-215ENST00000530861 FANCAO15360 1455 aa16.18■□□□□ 0.18
BDNF-215ENST00000530861 UPF2Q9HAU5 1272 aaKnown RBP16.18■□□□□ 0.18
BDNF-215ENST00000530861 DMRT2Q9Y5R5 561 aa16.18■□□□□ 0.18
BDNF-215ENST00000530861 SLC4A10Q6U841 1118 aa16.18■□□□□ 0.18
BDNF-215ENST00000530861 CDK19Q9BWU1 502 aa16.17■□□□□ 0.18
BDNF-215ENST00000530861 FOXD4L1Q9NU39 408 aa16.17■□□□□ 0.18
BDNF-215ENST00000530861 ZRANB1Q9UGI0 708 aa16.17■□□□□ 0.18
BDNF-215ENST00000530861 DCTN1Q14203 1278 aa16.17■□□□□ 0.18
BDNF-215ENST00000530861 DHX29Q7Z478 1369 aaKnown RBP16.16■□□□□ 0.18
BDNF-215ENST00000530861 XPCQ01831 940 aaPredicted RBP16.15■□□□□ 0.18
BDNF-215ENST00000530861 PDE3BQ13370 1112 aa16.15■□□□□ 0.18
BDNF-215ENST00000530861 C1orf115Q9H7X2 142 aa16.15■□□□□ 0.18
BDNF-215ENST00000530861 NOS1P29475 1434 aa16.15■□□□□ 0.18
BDNF-215ENST00000530861 ASXL2Q76L83 1435 aa16.13■□□□□ 0.17
BDNF-215ENST00000530861 TEX14Q8IWB6 1497 aa16.13■□□□□ 0.17
BDNF-215ENST00000530861 EXOSC9Q06265 439 aaKnown RBP16.13■□□□□ 0.17
BDNF-215ENST00000530861 MFAP1P55081 439 aaKnown RBP16.13■□□□□ 0.17
BDNF-215ENST00000530861 MIS18AQ9NYP9 233 aa16.13■□□□□ 0.17
BDNF-215ENST00000530861 AMER1Q5JTC6 1135 aaPredicted RBP16.13■□□□□ 0.17
BDNF-215ENST00000530861 TAOK2Q9UL54 1235 aa16.12■□□□□ 0.17
BDNF-215ENST00000530861 PRKAR2BP31323 418 aa16.12■□□□□ 0.17
BDNF-215ENST00000530861 DEKP35659 375 aaKnown RBP16.12■□□□□ 0.17
BDNF-215ENST00000530861 PLCH2O75038 1416 aa16.12■□□□□ 0.17
BDNF-215ENST00000530861 DIAPH1O60610 1272 aaKnown RBP16.12■□□□□ 0.17
BDNF-215ENST00000530861 FAM135AQ9P2D6 1515 aa16.11■□□□□ 0.17
BDNF-215ENST00000530861 IPO9Q96P70 1041 aaKnown RBP16.11■□□□□ 0.17
BDNF-215ENST00000530861 E9PSI1 815 aa16.1■□□□□ 0.17
BDNF-215ENST00000530861 NSD3Q9BZ95 1437 aa16.1■□□□□ 0.17
BDNF-215ENST00000530861 AMPHP49418 695 aa16.1■□□□□ 0.17
BDNF-215ENST00000530861 NME9Q86XW9 330 aa16.09■□□□□ 0.17
BDNF-215ENST00000530861 RUNDC1Q96C34 613 aa16.09■□□□□ 0.17
BDNF-215ENST00000530861 EMILIN1Q9Y6C2 1016 aa16.09■□□□□ 0.17
BDNF-215ENST00000530861 PRAG1Q86YV5 1406 aa16.09■□□□□ 0.17
BDNF-215ENST00000530861 WWC1Q8IX03 1113 aa16.08■□□□□ 0.17
BDNF-215ENST00000530861 GZF1Q9H116 711 aaPredicted RBP16.08■□□□□ 0.16
BDNF-215ENST00000530861 ERICH6BQ5W0A0 696 aa16.08■□□□□ 0.16
BDNF-215ENST00000530861 COG3Q96JB2 828 aa16.08■□□□□ 0.16
BDNF-215ENST00000530861 MYH16Q9H6N6 1097 aa16.08■□□□□ 0.16
BDNF-215ENST00000530861 MBD5Q9P267 1494 aa16.06■□□□□ 0.16
BDNF-215ENST00000530861 LNPKQ9C0E8 428 aa16.06■□□□□ 0.16
BDNF-215ENST00000530861 LRRIQ1Q96JM4 1722 aa16.06■□□□□ 0.16
BDNF-215ENST00000530861 HAP1P54257 671 aaPredicted RBP16.06■□□□□ 0.16
BDNF-215ENST00000530861 DUSP27Q5VZP5 1158 aa16.05■□□□□ 0.16
BDNF-215ENST00000530861 DNMT1P26358 1616 aaKnown RBP16.05■□□□□ 0.16
BDNF-215ENST00000530861 A2MP01023 1474 aa16.04■□□□□ 0.16
BDNF-215ENST00000530861 FAM83GA6ND36 823 aa16.04■□□□□ 0.16
BDNF-215ENST00000530861 EID1Q9Y6B2 187 aa16.04■□□□□ 0.16
BDNF-215ENST00000530861 SPATA31E1Q6ZUB1 1445 aa16.04■□□□□ 0.16
BDNF-215ENST00000530861 ZNF330Q9Y3S2 320 aaPredicted RBP16.04■□□□□ 0.16
BDNF-215ENST00000530861 RTF1Q92541 710 aaKnown RBP16.03■□□□□ 0.16
BDNF-215ENST00000530861 SMG6Q86US8 1419 aaKnown RBP16.03■□□□□ 0.16
BDNF-215ENST00000530861 NGEFQ8N5V2 710 aa16.03■□□□□ 0.16
BDNF-215ENST00000530861 SLFN5Q08AF3 891 aa16.03■□□□□ 0.16
BDNF-215ENST00000530861 PLEKHH1Q9ULM0 1364 aa16.02■□□□□ 0.16
BDNF-215ENST00000530861 EIF2S2P20042 333 aaKnown RBP16.02■□□□□ 0.16
BDNF-215ENST00000530861 ANKRD45Q5TZF3 282 aa16.02■□□□□ 0.16
BDNF-215ENST00000530861 NOL8Q76FK4 1167 aaKnown RBP16.02■□□□□ 0.16
BDNF-215ENST00000530861 SULT6B1Q6IMI4 303 aa16.02■□□□□ 0.15
BDNF-215ENST00000530861 UGGT1Q9NYU2 1555 aa16.02■□□□□ 0.15
BDNF-215ENST00000530861 ARHGEF12Q9NZN5 1544 aa16.02■□□□□ 0.15
BDNF-215ENST00000530861 NLRP6P59044 892 aa16.01■□□□□ 0.15
BDNF-215ENST00000530861 CCDC9Q9Y3X0 531 aaKnown RBP16.01■□□□□ 0.15
BDNF-215ENST00000530861 ABCC10Q5T3U5 1492 aa16.01■□□□□ 0.15
BDNF-215ENST00000530861 HDGFP51858 240 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms