RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 SMG6Q86US8 1419 aaKnown RBP15.66■□□□□ 0.1
SCN3B-206ENST00000530277 DISP3Q9P2K9 1392 aa15.65■□□□□ 0.1
SCN3B-206ENST00000530277 VGFO15240 615 aaPredicted RBP15.65■□□□□ 0.1
SCN3B-206ENST00000530277 FOXD4L5Q5VV16 416 aaPredicted RBP15.64■□□□□ 0.09
SCN3B-206ENST00000530277 FOXD4L4Q8WXT5 416 aaPredicted RBP15.64■□□□□ 0.09
SCN3B-206ENST00000530277 LNPKQ9C0E8 428 aa15.64■□□□□ 0.09
SCN3B-206ENST00000530277 MAGI1Q96QZ7 1491 aaPredicted RBP15.64■□□□□ 0.09
SCN3B-206ENST00000530277 EVC2Q86UK5 1308 aa15.64■□□□□ 0.09
SCN3B-206ENST00000530277 LAMC3Q9Y6N6 1575 aa15.64■□□□□ 0.09
SCN3B-206ENST00000530277 GPATCH8Q9UKJ3 1502 aaKnown RBP15.64■□□□□ 0.09
SCN3B-206ENST00000530277 FBLN1P23142 703 aa15.64■□□□□ 0.09
SCN3B-206ENST00000530277 ANKRD45Q5TZF3 282 aa15.64■□□□□ 0.09
SCN3B-206ENST00000530277 ERBINQ96RT1 1412 aa15.63■□□□□ 0.09
SCN3B-206ENST00000530277 ADGRF5Q8IZF2 1346 aa15.63■□□□□ 0.09
SCN3B-206ENST00000530277 NUP153P49790 1475 aaKnown RBP15.63■□□□□ 0.09
SCN3B-206ENST00000530277 PLEKHH2Q8IVE3 1493 aa15.63■□□□□ 0.09
SCN3B-206ENST00000530277 PMFBP1Q8TBY8 1022 aa15.63■□□□□ 0.09
SCN3B-206ENST00000530277 IPO8O15397 1037 aaKnown RBP15.62■□□□□ 0.09
SCN3B-206ENST00000530277 BACH2Q9BYV9 841 aa15.62■□□□□ 0.09
SCN3B-206ENST00000530277 UGGT2Q9NYU1 1516 aa15.62■□□□□ 0.09
SCN3B-206ENST00000530277 ZKSCAN2Q63HK3 967 aa15.62■□□□□ 0.09
SCN3B-206ENST00000530277 TRIM44Q96DX7 344 aaPredicted RBP15.62■□□□□ 0.09
SCN3B-206ENST00000530277 C1orf115Q9H7X2 142 aa15.61■□□□□ 0.09
SCN3B-206ENST00000530277 MS4A1P11836 297 aa15.61■□□□□ 0.09
SCN3B-206ENST00000530277 ZNF428Q96B54 188 aa15.61■□□□□ 0.09
SCN3B-206ENST00000530277 RUNDC1Q96C34 613 aa15.61■□□□□ 0.09
SCN3B-206ENST00000530277 NUTM2GQ5VZR2 741 aa15.61■□□□□ 0.09
SCN3B-206ENST00000530277 FOXD4L6Q3SYB3 417 aaPredicted RBP15.6■□□□□ 0.09
SCN3B-206ENST00000530277 FOXD4L3Q6VB84 417 aaPredicted RBP15.6■□□□□ 0.09
SCN3B-206ENST00000530277 OSCARQ8IYS5 282 aa15.6■□□□□ 0.09
SCN3B-206ENST00000530277 PLCB2Q00722 1185 aa15.6■□□□□ 0.09
SCN3B-206ENST00000530277 EXOSC9Q06265 439 aaKnown RBP15.6■□□□□ 0.09
SCN3B-206ENST00000530277 NFKBIBQ15653 356 aa15.6■□□□□ 0.09
SCN3B-206ENST00000530277 RTF1Q92541 710 aaKnown RBP15.6■□□□□ 0.09
SCN3B-206ENST00000530277 PRAM1Q96QH2 718 aa15.6■□□□□ 0.09
SCN3B-206ENST00000530277 FRAT2O75474 233 aaPredicted RBP15.59■□□□□ 0.09
SCN3B-206ENST00000530277 THUMPD2Q9BTF0 503 aaKnown RBP15.59■□□□□ 0.09
SCN3B-206ENST00000530277 OS9Q13438 667 aaPredicted RBP15.59■□□□□ 0.09
SCN3B-206ENST00000530277 DZIP1LQ8IYY4 767 aaKnown RBP15.59■□□□□ 0.09
SCN3B-206ENST00000530277 DIAPH1O60610 1272 aaKnown RBP15.58■□□□□ 0.09
SCN3B-206ENST00000530277 MAGI3Q5TCQ9 1506 aa15.58■□□□□ 0.08
SCN3B-206ENST00000530277 FAM69CQ0P6D2 419 aa15.58■□□□□ 0.08
SCN3B-206ENST00000530277 NAP1L5Q96NT1 182 aaPredicted RBP15.58■□□□□ 0.08
SCN3B-206ENST00000530277 NGDNQ8NEJ9 315 aaKnown RBP15.57■□□□□ 0.08
SCN3B-206ENST00000530277 PNNQ9H307 717 aaKnown RBP15.57■□□□□ 0.08
SCN3B-206ENST00000530277 GOLGA6L22H0YM25 854 aa15.57■□□□□ 0.08
SCN3B-206ENST00000530277 CABP1Q9NZU7 370 aa15.55■□□□□ 0.08
SCN3B-206ENST00000530277 BRPF3Q9ULD4 1205 aa15.55■□□□□ 0.08
SCN3B-206ENST00000530277 GSE1Q14687 1217 aa15.54■□□□□ 0.08
SCN3B-206ENST00000530277 ATP10BO94823 1461 aa15.54■□□□□ 0.08
SCN3B-206ENST00000530277 PRKAR2BP31323 418 aa15.53■□□□□ 0.08
SCN3B-206ENST00000530277 PDZRN3Q9UPQ7 1066 aa15.53■□□□□ 0.08
SCN3B-206ENST00000530277 TXNDC2Q86VQ3 553 aa15.53■□□□□ 0.08
SCN3B-206ENST00000530277 CCDC141Q6ZP82 1450 aa15.53■□□□□ 0.08
SCN3B-206ENST00000530277 AMPHP49418 695 aa15.53■□□□□ 0.08
SCN3B-206ENST00000530277 CASC1Q6TDU7 716 aa15.53■□□□□ 0.08
SCN3B-206ENST00000530277 WWC1Q8IX03 1113 aa15.53■□□□□ 0.08
SCN3B-206ENST00000530277 TNNQ9UQP3 1299 aa15.52■□□□□ 0.08
SCN3B-206ENST00000530277 SLFN5Q08AF3 891 aa15.52■□□□□ 0.08
SCN3B-206ENST00000530277 DUSP27Q5VZP5 1158 aa15.51■□□□□ 0.07
SCN3B-206ENST00000530277 TRIM6-TRIM34B2RNG4 842 aa15.51■□□□□ 0.07
SCN3B-206ENST00000530277 WAPLQ7Z5K2 1190 aa15.51■□□□□ 0.07
SCN3B-206ENST00000530277 COG3Q96JB2 828 aa15.51■□□□□ 0.07
SCN3B-206ENST00000530277 TESK2Q96S53 571 aa15.51■□□□□ 0.07
SCN3B-206ENST00000530277 KDM6BO15054 1643 aa15.51■□□□□ 0.07
SCN3B-206ENST00000530277 SPINK5Q9NQ38 1064 aaPredicted RBP15.5■□□□□ 0.07
SCN3B-206ENST00000530277 DHX29Q7Z478 1369 aaKnown RBP15.5■□□□□ 0.07
SCN3B-206ENST00000530277 ARID3AQ99856 593 aa15.5■□□□□ 0.07
SCN3B-206ENST00000530277 KCNJ4P48050 445 aa15.49■□□□□ 0.07
SCN3B-206ENST00000530277 HAP1P54257 671 aaPredicted RBP15.49■□□□□ 0.07
SCN3B-206ENST00000530277 RRS1Q15050 365 aaKnown RBP15.49■□□□□ 0.07
SCN3B-206ENST00000530277 FBXO31Q5XUX0 539 aaPredicted RBP15.49■□□□□ 0.07
SCN3B-206ENST00000530277 CFAP43Q8NDM7 1665 aa15.49■□□□□ 0.07
SCN3B-206ENST00000530277 NOB1Q9ULX3 412 aaKnown RBP15.49■□□□□ 0.07
SCN3B-206ENST00000530277 ZNF330Q9Y3S2 320 aaPredicted RBP15.49■□□□□ 0.07
SCN3B-206ENST00000530277 CCDC9Q9Y3X0 531 aaKnown RBP15.48■□□□□ 0.07
SCN3B-206ENST00000530277 PTMAP06454 111 aaKnown RBP15.48■□□□□ 0.07
SCN3B-206ENST00000530277 NSD3Q9BZ95 1437 aa15.47■□□□□ 0.07
SCN3B-206ENST00000530277 DCTN1Q14203 1278 aa15.47■□□□□ 0.07
SCN3B-206ENST00000530277 NAP1L2Q9ULW6 460 aaPredicted RBP15.47■□□□□ 0.07
SCN3B-206ENST00000530277 EIF2S2P20042 333 aaKnown RBP15.47■□□□□ 0.07
SCN3B-206ENST00000530277 CTTNBP2Q8WZ74 1663 aa15.46■□□□□ 0.07
SCN3B-206ENST00000530277 PER1O15534 1290 aaPredicted RBP15.46■□□□□ 0.07
SCN3B-206ENST00000530277 IGHDP01880 384 aa15.46■□□□□ 0.07
SCN3B-206ENST00000530277 PZPP20742 1482 aa15.46■□□□□ 0.07
SCN3B-206ENST00000530277 AMER1Q5JTC6 1135 aaPredicted RBP15.45■□□□□ 0.06
SCN3B-206ENST00000530277 CDK19Q9BWU1 502 aa15.45■□□□□ 0.06
SCN3B-206ENST00000530277 DDX19BQ9UMR2 479 aa15.45■□□□□ 0.06
SCN3B-206ENST00000530277 RILPL2Q969X0 211 aa15.45■□□□□ 0.06
SCN3B-206ENST00000530277 STK31Q9BXU1 1019 aa15.45■□□□□ 0.06
SCN3B-206ENST00000530277 DMRT2Q9Y5R5 561 aa15.45■□□□□ 0.06
SCN3B-206ENST00000530277 HDGFP51858 240 aaKnown RBP15.44■□□□□ 0.06
SCN3B-206ENST00000530277 SLC26A8Q96RN1 970 aa15.44■□□□□ 0.06
SCN3B-206ENST00000530277 C22orf23Q9BZE7 217 aa15.44■□□□□ 0.06
SCN3B-206ENST00000530277 IDI1Q13907 227 aa15.43■□□□□ 0.06
SCN3B-206ENST00000530277 CHMP4BQ9H444 224 aaKnown RBP15.43■□□□□ 0.06
SCN3B-206ENST00000530277 NGEFQ8N5V2 710 aa15.43■□□□□ 0.06
SCN3B-206ENST00000530277 RBM33Q96EV2 1170 aaKnown RBP15.43■□□□□ 0.06
SCN3B-206ENST00000530277 MIS18AQ9NYP9 233 aa15.43■□□□□ 0.06
SCN3B-206ENST00000530277 CALD1Q05682 793 aaKnown RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms