RNA–Protein interactions for RNA: ENST00000530094.5

CTNND1-225, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-225ENST00000530094 CHMP3Q9Y3E7 222 aa10.54□□□□□ -0.72
CTNND1-225ENST00000530094 ESCO1Q5FWF5 840 aa10.54□□□□□ -0.72
CTNND1-225ENST00000530094 BIVM-ERCC5R4GMW8 1640 aa10.54□□□□□ -0.72
CTNND1-225ENST00000530094 TIAM1Q13009 1591 aa10.54□□□□□ -0.72
CTNND1-225ENST00000530094 SMC4Q9NTJ3 1288 aa10.54□□□□□ -0.72
CTNND1-225ENST00000530094 TCERG1O14776 1098 aaKnown RBP10.53□□□□□ -0.72
CTNND1-225ENST00000530094 CEBPAP49715 358 aaPredicted RBP10.53□□□□□ -0.72
CTNND1-225ENST00000530094 SUPT6HQ7KZ85 1726 aaKnown RBP10.53□□□□□ -0.72
CTNND1-225ENST00000530094 SLC52A1Q9NWF4 448 aa10.53□□□□□ -0.72
CTNND1-225ENST00000530094 PCF11O94913 1555 aaKnown RBP10.53□□□□□ -0.72
CTNND1-225ENST00000530094 B4GALNT3Q6L9W6 998 aa10.53□□□□□ -0.72
CTNND1-225ENST00000530094 PIP4K2BP78356 416 aa10.52□□□□□ -0.73
CTNND1-225ENST00000530094 NLRP13Q86W25 1043 aa10.52□□□□□ -0.73
CTNND1-225ENST00000530094 DAPK1P53355 1430 aa10.52□□□□□ -0.73
CTNND1-225ENST00000530094 APBB1O00213 710 aa10.52□□□□□ -0.73
CTNND1-225ENST00000530094 HSP90B1P14625 803 aaKnown RBP10.52□□□□□ -0.73
CTNND1-225ENST00000530094 GTF2E1P29083 439 aaPredicted RBP10.52□□□□□ -0.73
CTNND1-225ENST00000530094 LRRFIP1Q32MZ4 808 aaKnown RBP10.52□□□□□ -0.73
CTNND1-225ENST00000530094 C1orf141Q5JVX7 400 aa10.51□□□□□ -0.73
CTNND1-225ENST00000530094 PHF23Q9BUL5 403 aaPredicted RBP10.51□□□□□ -0.73
CTNND1-225ENST00000530094 SYTL4Q96C24 671 aaPredicted RBP10.51□□□□□ -0.73
CTNND1-225ENST00000530094 USP35Q9P2H5 1018 aa10.51□□□□□ -0.73
CTNND1-225ENST00000530094 KIF14Q15058 1648 aa10.51□□□□□ -0.73
CTNND1-225ENST00000530094 RRBP1Q9P2E9 1410 aaKnown RBP10.51□□□□□ -0.73
CTNND1-225ENST00000530094 PRAM1Q96QH2 718 aa10.51□□□□□ -0.73
CTNND1-225ENST00000530094 RRP7AQ9Y3A4 280 aaKnown RBP10.51□□□□□ -0.73
CTNND1-225ENST00000530094 STAC3Q96MF2 364 aa10.5□□□□□ -0.73
CTNND1-225ENST00000530094 MSH5O43196 834 aa10.5□□□□□ -0.73
CTNND1-225ENST00000530094 TRIM6-TRIM34B2RNG4 842 aa10.5□□□□□ -0.73
CTNND1-225ENST00000530094 NLRP6P59044 892 aa10.5□□□□□ -0.73
CTNND1-225ENST00000530094 CCDC141Q6ZP82 1450 aa10.49□□□□□ -0.73
CTNND1-225ENST00000530094 FANCAO15360 1455 aa10.49□□□□□ -0.73
CTNND1-225ENST00000530094 DENND4BO75064 1496 aaPredicted RBP10.49□□□□□ -0.73
CTNND1-225ENST00000530094 FRAT2O75474 233 aaPredicted RBP10.49□□□□□ -0.73
CTNND1-225ENST00000530094 NUTM2BA6NNL0 878 aaPredicted RBP10.48□□□□□ -0.73
CTNND1-225ENST00000530094 NUTM2EB1AL46 878 aaPredicted RBP10.48□□□□□ -0.73
CTNND1-225ENST00000530094 NUTM2AQ8IVF1 878 aaPredicted RBP10.48□□□□□ -0.73
CTNND1-225ENST00000530094 ASXL2Q76L83 1435 aa10.48□□□□□ -0.73
CTNND1-225ENST00000530094 NOC3LQ8WTT2 800 aaKnown RBP10.48□□□□□ -0.73
CTNND1-225ENST00000530094 GGNBP2Q9H3C7 697 aa10.48□□□□□ -0.73
CTNND1-225ENST00000530094 GPRASP1Q5JY77 1395 aa10.48□□□□□ -0.73
CTNND1-225ENST00000530094 AMOTL1Q8IY63 956 aa10.48□□□□□ -0.73
CTNND1-225ENST00000530094 RASSF8Q8NHQ8 419 aa10.48□□□□□ -0.73
CTNND1-225ENST00000530094 FBXO31Q5XUX0 539 aaPredicted RBP10.47□□□□□ -0.73
CTNND1-225ENST00000530094 ABTB2Q8N961 1025 aa10.47□□□□□ -0.73
CTNND1-225ENST00000530094 NLRP2Q9NX02 1062 aa10.47□□□□□ -0.73
CTNND1-225ENST00000530094 CAMSAP2Q08AD1 1489 aa10.47□□□□□ -0.73
CTNND1-225ENST00000530094 PHF14O94880 888 aa10.47□□□□□ -0.73
CTNND1-225ENST00000530094 NGEFQ8N5V2 710 aa10.47□□□□□ -0.73
CTNND1-225ENST00000530094 NOL10Q9BSC4 688 aaKnown RBP10.47□□□□□ -0.73
CTNND1-225ENST00000530094 SLC4A10Q6U841 1118 aa10.46□□□□□ -0.73
CTNND1-225ENST00000530094 MYBBP1AQ9BQG0 1328 aaKnown RBP10.46□□□□□ -0.73
CTNND1-225ENST00000530094 ST18O60284 1047 aa10.46□□□□□ -0.73
CTNND1-225ENST00000530094 TEFQ10587 303 aa10.46□□□□□ -0.73
CTNND1-225ENST00000530094 KIF16BQ96L93 1317 aa10.46□□□□□ -0.73
CTNND1-225ENST00000530094 NBPF1Q3BBV0 1214 aa10.46□□□□□ -0.73
CTNND1-225ENST00000530094 ERBINQ96RT1 1412 aa10.46□□□□□ -0.73
CTNND1-225ENST00000530094 EIF4G3O43432 1585 aaKnown RBP10.46□□□□□ -0.74
CTNND1-225ENST00000530094 HFM1A2PYH4 1435 aa10.46□□□□□ -0.74
CTNND1-225ENST00000530094 MARCH6O60337 910 aa10.45□□□□□ -0.74
CTNND1-225ENST00000530094 AKNAQ7Z591 1439 aa10.45□□□□□ -0.74
CTNND1-225ENST00000530094 TTC5Q8N0Z6 440 aa10.45□□□□□ -0.74
CTNND1-225ENST00000530094 KIAA1107Q9UPP5 1409 aa10.45□□□□□ -0.74
CTNND1-225ENST00000530094 ELL2O00472 640 aaPredicted RBP10.45□□□□□ -0.74
CTNND1-225ENST00000530094 NEXNQ0ZGT2 675 aa10.45□□□□□ -0.74
CTNND1-225ENST00000530094 DIAPH1O60610 1272 aaKnown RBP10.45□□□□□ -0.74
CTNND1-225ENST00000530094 RAPGEF4Q8WZA2 1011 aa10.44□□□□□ -0.74
CTNND1-225ENST00000530094 CEP89Q96ST8 783 aa10.44□□□□□ -0.74
CTNND1-225ENST00000530094 STRN4Q9NRL3 753 aa10.44□□□□□ -0.74
CTNND1-225ENST00000530094 WDR62O43379 1518 aa10.44□□□□□ -0.74
CTNND1-225ENST00000530094 XPCQ01831 940 aaPredicted RBP10.43□□□□□ -0.74
CTNND1-225ENST00000530094 SPRYD3Q8NCJ5 442 aa10.43□□□□□ -0.74
CTNND1-225ENST00000530094 ROCK1Q13464 1354 aa10.43□□□□□ -0.74
CTNND1-225ENST00000530094 TOMM22Q9NS69 142 aa10.43□□□□□ -0.74
CTNND1-225ENST00000530094 AKAP17AQ02040 695 aaKnown RBP10.43□□□□□ -0.74
CTNND1-225ENST00000530094 SYNE3Q6ZMZ3 975 aa10.43□□□□□ -0.74
CTNND1-225ENST00000530094 RBM33Q96EV2 1170 aaKnown RBP10.43□□□□□ -0.74
CTNND1-225ENST00000530094 CDK19Q9BWU1 502 aa10.43□□□□□ -0.74
CTNND1-225ENST00000530094 TRIM34Q9BYJ4 488 aa10.43□□□□□ -0.74
CTNND1-225ENST00000530094 MFAP1P55081 439 aaKnown RBP10.42□□□□□ -0.74
CTNND1-225ENST00000530094 NCBP3Q53F19 620 aaKnown RBP10.42□□□□□ -0.74
CTNND1-225ENST00000530094 ADAMTS12P58397 1594 aa10.42□□□□□ -0.74
CTNND1-225ENST00000530094 E9PSI1 815 aa10.42□□□□□ -0.74
CTNND1-225ENST00000530094 DDX58O95786 925 aaKnown RBP10.42□□□□□ -0.74
CTNND1-225ENST00000530094 WWC1Q8IX03 1113 aa10.42□□□□□ -0.74
CTNND1-225ENST00000530094 ATP10BO94823 1461 aa10.42□□□□□ -0.74
CTNND1-225ENST00000530094 TPM2P07951 284 aa10.42□□□□□ -0.74
CTNND1-225ENST00000530094 ATP6V1DQ9Y5K8 247 aa10.42□□□□□ -0.74
CTNND1-225ENST00000530094 WASHC2AQ641Q2 1341 aa10.42□□□□□ -0.74
CTNND1-225ENST00000530094 HMOX1P09601 288 aa10.41□□□□□ -0.74
CTNND1-225ENST00000530094 ANO8Q9HCE9 1232 aaPredicted RBP10.41□□□□□ -0.74
CTNND1-225ENST00000530094 RUFY2Q8WXA3 655 aa10.41□□□□□ -0.74
CTNND1-225ENST00000530094 CLUAP1Q96AJ1 413 aa10.41□□□□□ -0.74
CTNND1-225ENST00000530094 THOC2Q8NI27 1593 aaKnown RBP10.41□□□□□ -0.74
CTNND1-225ENST00000530094 TEX14Q8IWB6 1497 aa10.41□□□□□ -0.74
CTNND1-225ENST00000530094 TPM3P06753 285 aa10.41□□□□□ -0.74
CTNND1-225ENST00000530094 EIF2S2P20042 333 aaKnown RBP10.41□□□□□ -0.74
CTNND1-225ENST00000530094 CTDP1Q9Y5B0 961 aaPredicted RBP10.41□□□□□ -0.74
CTNND1-225ENST00000530094 ABCC5O15440 1437 aa10.41□□□□□ -0.74
CTNND1-225ENST00000530094 SF3A1Q15459 793 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms