RNA–Protein interactions for RNA: ENST00000529813.1

USP47-208, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 3,123 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-208ENST00000529813 PLA2R1Q13018 1463 aa6.71□□□□□ -1.33
USP47-208ENST00000529813 TMEM132EQ6IEE7 984 aa6.71□□□□□ -1.34
USP47-208ENST00000529813 DCAF11Q8TEB1 546 aa6.71□□□□□ -1.34
USP47-208ENST00000529813 LMTK2Q8IWU2 1503 aa6.7□□□□□ -1.34
USP47-208ENST00000529813 RPRD2Q5VT52 1461 aaKnown RBP6.7□□□□□ -1.34
USP47-208ENST00000529813 PIK3C2BO00750 1634 aa6.7□□□□□ -1.34
USP47-208ENST00000529813 TMEM94Q12767 1356 aa6.7□□□□□ -1.34
USP47-208ENST00000529813 ZC3H13Q5T200 1668 aaKnown RBP6.7□□□□□ -1.34
USP47-208ENST00000529813 ATF3P18847 181 aa6.7□□□□□ -1.34
USP47-208ENST00000529813 SIN3AQ96ST3 1273 aa6.7□□□□□ -1.34
USP47-208ENST00000529813 STRCQ7RTU9 1775 aa6.69□□□□□ -1.34
USP47-208ENST00000529813 SYNMO15061 1565 aa6.69□□□□□ -1.34
USP47-208ENST00000529813 TBX22Q9Y458 520 aa6.69□□□□□ -1.34
USP47-208ENST00000529813 ADGRF5Q8IZF2 1346 aa6.69□□□□□ -1.34
USP47-208ENST00000529813 VWDEQ8N2E2 1590 aa6.68□□□□□ -1.34
USP47-208ENST00000529813 DEPDC5O75140 1603 aa6.68□□□□□ -1.34
USP47-208ENST00000529813 TET3O43151 1660 aa6.68□□□□□ -1.34
USP47-208ENST00000529813 HSPA1LP34931 641 aa6.68□□□□□ -1.34
USP47-208ENST00000529813 CFAP70Q5T0N1 1121 aa6.67□□□□□ -1.34
USP47-208ENST00000529813 UNC13BO14795 1591 aa6.67□□□□□ -1.34
USP47-208ENST00000529813 POGKQ9P215 609 aa6.67□□□□□ -1.34
USP47-208ENST00000529813 PLEKHG1Q9ULL1 1385 aa6.67□□□□□ -1.34
USP47-208ENST00000529813 ADGRB3O60242 1522 aa6.67□□□□□ -1.34
USP47-208ENST00000529813 E9PCH4 1651 aa6.66□□□□□ -1.34
USP47-208ENST00000529813 WAPLQ7Z5K2 1190 aa6.66□□□□□ -1.34
USP47-208ENST00000529813 TRAK1Q9UPV9 953 aa6.66□□□□□ -1.34
USP47-208ENST00000529813 MSH6P52701 1360 aa6.66□□□□□ -1.34
USP47-208ENST00000529813 IQGAP3Q86VI3 1631 aa6.66□□□□□ -1.34
USP47-208ENST00000529813 ACIN1Q9UKV3 1341 aaKnown RBP6.66□□□□□ -1.34
USP47-208ENST00000529813 METP08581 1390 aa6.65□□□□□ -1.34
USP47-208ENST00000529813 HIRIP3Q9BW71 556 aaPredicted RBP6.65□□□□□ -1.34
USP47-208ENST00000529813 ARHGAP23Q9P227 1491 aa6.65□□□□□ -1.34
USP47-208ENST00000529813 RPGRIP1LQ68CZ1 1315 aa6.65□□□□□ -1.34
USP47-208ENST00000529813 SLAIN2Q9P270 581 aa6.65□□□□□ -1.34
USP47-208ENST00000529813 UBR1Q8IWV7 1749 aa6.65□□□□□ -1.34
USP47-208ENST00000529813 DISP3Q9P2K9 1392 aa6.65□□□□□ -1.35
USP47-208ENST00000529813 LMOD2Q6P5Q4 547 aa6.65□□□□□ -1.35
USP47-208ENST00000529813 CCER1Q8TC90 406 aaPredicted RBP6.65□□□□□ -1.35
USP47-208ENST00000529813 ZNF142P52746 1687 aaPredicted RBP6.65□□□□□ -1.35
USP47-208ENST00000529813 NEURL4Q96JN8 1562 aa6.65□□□□□ -1.35
USP47-208ENST00000529813 NUTM2BA6NNL0 878 aaPredicted RBP6.64□□□□□ -1.35
USP47-208ENST00000529813 NUTM2EB1AL46 878 aaPredicted RBP6.64□□□□□ -1.35
USP47-208ENST00000529813 NUTM2AQ8IVF1 878 aaPredicted RBP6.64□□□□□ -1.35
USP47-208ENST00000529813 DDX17Q92841 729 aaKnown RBP6.64□□□□□ -1.35
USP47-208ENST00000529813 C19orf44Q9H6X5 657 aa6.64□□□□□ -1.35
USP47-208ENST00000529813 SLIT1O75093 1534 aa6.64□□□□□ -1.35
USP47-208ENST00000529813 ZFYVE9O95405 1425 aa6.64□□□□□ -1.35
USP47-208ENST00000529813 GCC2Q8IWJ2 1684 aa6.64□□□□□ -1.35
USP47-208ENST00000529813 CADPS2Q86UW7 1296 aa6.64□□□□□ -1.35
USP47-208ENST00000529813 MED14O60244 1454 aa6.64□□□□□ -1.35
USP47-208ENST00000529813 XPCQ01831 940 aaPredicted RBP6.63□□□□□ -1.35
USP47-208ENST00000529813 IQGAP1P46940 1657 aa6.63□□□□□ -1.35
USP47-208ENST00000529813 LTBP4Q8N2S1 1624 aa6.63□□□□□ -1.35
USP47-208ENST00000529813 MINK1Q8N4C8 1332 aaPredicted RBP6.63□□□□□ -1.35
USP47-208ENST00000529813 ESCO1Q5FWF5 840 aa6.63□□□□□ -1.35
USP47-208ENST00000529813 ANKRD30BQ9BXX2 1392 aa6.62□□□□□ -1.35
USP47-208ENST00000529813 LRRC7Q96NW7 1537 aa6.62□□□□□ -1.35
USP47-208ENST00000529813 CLTCL1P53675 1640 aa6.62□□□□□ -1.35
USP47-208ENST00000529813 ADAMTS13Q76LX8 1427 aa6.62□□□□□ -1.35
USP47-208ENST00000529813 HRCP23327 699 aa6.62□□□□□ -1.35
USP47-208ENST00000529813 PRAM1Q96QH2 718 aa6.62□□□□□ -1.35
USP47-208ENST00000529813 MEX3CQ5U5Q3 659 aaKnown RBP6.62□□□□□ -1.35
USP47-208ENST00000529813 L3MBTL2Q969R5 705 aa6.62□□□□□ -1.35
USP47-208ENST00000529813 TRPM2O94759 1503 aa6.62□□□□□ -1.35
USP47-208ENST00000529813 TMEM131LA2VDJ0 1609 aa6.62□□□□□ -1.35
USP47-208ENST00000529813 CPS1P31327 1500 aa6.61□□□□□ -1.35
USP47-208ENST00000529813 POLR1AO95602 1720 aaPredicted RBP6.61□□□□□ -1.35
USP47-208ENST00000529813 DHX57Q6P158 1386 aaKnown RBP6.61□□□□□ -1.35
USP47-208ENST00000529813 HAP1P54257 671 aaPredicted RBP6.61□□□□□ -1.35
USP47-208ENST00000529813 ORAI2Q96SN7 254 aa6.61□□□□□ -1.35
USP47-208ENST00000529813 MYO5BQ9ULV0 1848 aa6.6□□□□□ -1.35
USP47-208ENST00000529813 SPHKAPQ2M3C7 1700 aa6.6□□□□□ -1.35
USP47-208ENST00000529813 PTPRUQ92729 1446 aa6.6□□□□□ -1.35
USP47-208ENST00000529813 TONSLQ96HA7 1378 aa6.6□□□□□ -1.35
USP47-208ENST00000529813 FOXO3O43524 673 aa6.6□□□□□ -1.35
USP47-208ENST00000529813 NBPF1Q3BBV0 1214 aa6.6□□□□□ -1.35
USP47-208ENST00000529813 ROBO2Q9HCK4 1378 aa6.6□□□□□ -1.35
USP47-208ENST00000529813 PMFBP1Q8TBY8 1022 aa6.6□□□□□ -1.35
USP47-208ENST00000529813 C14orf93Q9H972 538 aaKnown RBP6.59□□□□□ -1.35
USP47-208ENST00000529813 POLR3GLQ9BT43 218 aa6.59□□□□□ -1.35
USP47-208ENST00000529813 PAK3O75914 559 aaPredicted RBP6.59□□□□□ -1.36
USP47-208ENST00000529813 ADAMTS2O95450 1211 aa6.59□□□□□ -1.36
USP47-208ENST00000529813 PLEKHH1Q9ULM0 1364 aa6.58□□□□□ -1.36
USP47-208ENST00000529813 SPATA31E1Q6ZUB1 1445 aa6.58□□□□□ -1.36
USP47-208ENST00000529813 BRINP3Q76B58 766 aa6.58□□□□□ -1.36
USP47-208ENST00000529813 PIK3R4Q99570 1358 aa6.58□□□□□ -1.36
USP47-208ENST00000529813 SRPK2P78362 688 aaKnown RBP6.58□□□□□ -1.36
USP47-208ENST00000529813 KIF1BO60333 1816 aa6.57□□□□□ -1.36
USP47-208ENST00000529813 NEXMIFQ5QGS0 1516 aa6.57□□□□□ -1.36
USP47-208ENST00000529813 PSME1Q06323 249 aa6.57□□□□□ -1.36
USP47-208ENST00000529813 NGDNQ8NEJ9 315 aaKnown RBP6.57□□□□□ -1.36
USP47-208ENST00000529813 ZBTB7CA1YPR0 619 aa6.56□□□□□ -1.36
USP47-208ENST00000529813 CARD11Q9BXL7 1154 aa6.56□□□□□ -1.36
USP47-208ENST00000529813 YTHDC2Q9H6S0 1430 aaKnown RBP6.56□□□□□ -1.36
USP47-208ENST00000529813 LRPPRCP42704 1394 aaKnown RBP6.56□□□□□ -1.36
USP47-208ENST00000529813 NKTRP30414 1462 aaKnown RBP6.56□□□□□ -1.36
USP47-208ENST00000529813 NUTM2GQ5VZR2 741 aa6.55□□□□□ -1.36
USP47-208ENST00000529813 C8orf37Q96NL8 207 aa6.55□□□□□ -1.36
USP47-208ENST00000529813 ALKQ9UM73 1620 aa6.55□□□□□ -1.36
USP47-208ENST00000529813 ROCK2O75116 1388 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms