RNA–Protein interactions for RNA: ENST00000529167.5

C11orf88-203, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene C11orf88, Length 3,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-203ENST00000529167 DEPDC5O75140 1603 aa10.64□□□□□ -0.71
C11orf88-203ENST00000529167 SYNMO15061 1565 aa10.64□□□□□ -0.71
C11orf88-203ENST00000529167 MED14O60244 1454 aa10.63□□□□□ -0.71
C11orf88-203ENST00000529167 DCAF11Q8TEB1 546 aa10.63□□□□□ -0.71
C11orf88-203ENST00000529167 RRBP1Q9P2E9 1410 aaKnown RBP10.63□□□□□ -0.71
C11orf88-203ENST00000529167 FMN1Q68DA7 1419 aa10.62□□□□□ -0.71
C11orf88-203ENST00000529167 RNF123Q5XPI4 1314 aa10.62□□□□□ -0.71
C11orf88-203ENST00000529167 INO80Q9ULG1 1556 aaPredicted RBP10.62□□□□□ -0.71
C11orf88-203ENST00000529167 HOMEZQ8IX15 550 aa10.61□□□□□ -0.71
C11orf88-203ENST00000529167 FOXD4L1Q9NU39 408 aa10.61□□□□□ -0.71
C11orf88-203ENST00000529167 HSP90AA1P07900 732 aaKnown RBP10.61□□□□□ -0.71
C11orf88-203ENST00000529167 NFKBIBQ15653 356 aa10.61□□□□□ -0.71
C11orf88-203ENST00000529167 PRDM4Q9UKN5 801 aa10.61□□□□□ -0.71
C11orf88-203ENST00000529167 LRRIQ1Q96JM4 1722 aa10.61□□□□□ -0.71
C11orf88-203ENST00000529167 FAM135AQ9P2D6 1515 aa10.6□□□□□ -0.71
C11orf88-203ENST00000529167 RRAGDQ9NQL2 400 aaPredicted RBP10.6□□□□□ -0.71
C11orf88-203ENST00000529167 CDC42BPAQ5VT25 1732 aa10.6□□□□□ -0.71
C11orf88-203ENST00000529167 NAP1L5Q96NT1 182 aaPredicted RBP10.6□□□□□ -0.71
C11orf88-203ENST00000529167 STRCP1A6NGW2 1772 aa10.59□□□□□ -0.71
C11orf88-203ENST00000529167 CALD1Q05682 793 aaKnown RBP10.59□□□□□ -0.71
C11orf88-203ENST00000529167 ATP7AQ04656 1500 aa10.59□□□□□ -0.71
C11orf88-203ENST00000529167 LRRC7Q96NW7 1537 aa10.59□□□□□ -0.71
C11orf88-203ENST00000529167 UBTFP17480 764 aaKnown RBP10.59□□□□□ -0.71
C11orf88-203ENST00000529167 ZBED9Q6R2W3 1325 aa10.58□□□□□ -0.72
C11orf88-203ENST00000529167 A2MP01023 1474 aa10.58□□□□□ -0.72
C11orf88-203ENST00000529167 ADGBQ8N7X0 1667 aa10.57□□□□□ -0.72
C11orf88-203ENST00000529167 FOXD1Q16676 465 aa10.57□□□□□ -0.72
C11orf88-203ENST00000529167 IQGAP1P46940 1657 aa10.57□□□□□ -0.72
C11orf88-203ENST00000529167 GTF2E1P29083 439 aaPredicted RBP10.56□□□□□ -0.72
C11orf88-203ENST00000529167 BBXQ8WY36 941 aaPredicted RBP10.56□□□□□ -0.72
C11orf88-203ENST00000529167 NPHP4O75161 1426 aaPredicted RBP10.56□□□□□ -0.72
C11orf88-203ENST00000529167 TCERG1O14776 1098 aaKnown RBP10.56□□□□□ -0.72
C11orf88-203ENST00000529167 CLCN1P35523 988 aa10.55□□□□□ -0.72
C11orf88-203ENST00000529167 DDRGK1Q96HY6 314 aa10.55□□□□□ -0.72
C11orf88-203ENST00000529167 BACH2Q9BYV9 841 aa10.55□□□□□ -0.72
C11orf88-203ENST00000529167 KIAA1107Q9UPP5 1409 aa10.55□□□□□ -0.72
C11orf88-203ENST00000529167 SYCP2Q9BX26 1530 aa10.55□□□□□ -0.72
C11orf88-203ENST00000529167 PZPP20742 1482 aa10.55□□□□□ -0.72
C11orf88-203ENST00000529167 MS4A1P11836 297 aa10.54□□□□□ -0.72
C11orf88-203ENST00000529167 POTEAQ6S8J7 498 aa10.54□□□□□ -0.72
C11orf88-203ENST00000529167 NLRP1Q9C000 1473 aa10.54□□□□□ -0.72
C11orf88-203ENST00000529167 NPM2Q86SE8 214 aaKnown RBP10.54□□□□□ -0.72
C11orf88-203ENST00000529167 TNRQ92752 1358 aa10.54□□□□□ -0.72
C11orf88-203ENST00000529167 ARHGAP35Q9NRY4 1499 aa10.53□□□□□ -0.72
C11orf88-203ENST00000529167 SETD1AO15047 1707 aaKnown RBP10.53□□□□□ -0.72
C11orf88-203ENST00000529167 SPAG9O60271 1321 aaKnown RBP10.53□□□□□ -0.72
C11orf88-203ENST00000529167 SMG6Q86US8 1419 aaKnown RBP10.53□□□□□ -0.72
C11orf88-203ENST00000529167 ZC3H13Q5T200 1668 aaKnown RBP10.53□□□□□ -0.72
C11orf88-203ENST00000529167 PDCL3Q9H2J4 239 aa10.53□□□□□ -0.72
C11orf88-203ENST00000529167 PLEKHH2Q8IVE3 1493 aa10.53□□□□□ -0.72
C11orf88-203ENST00000529167 ANKLE2Q86XL3 938 aa10.53□□□□□ -0.72
C11orf88-203ENST00000529167 XIRP1Q702N8 1843 aaKnown RBP10.52□□□□□ -0.72
C11orf88-203ENST00000529167 PDE4AP27815 886 aa10.52□□□□□ -0.72
C11orf88-203ENST00000529167 CCDC18Q5T9S5 1454 aa10.52□□□□□ -0.72
C11orf88-203ENST00000529167 FAM135BQ49AJ0 1406 aa10.52□□□□□ -0.73
C11orf88-203ENST00000529167 KDM5DQ9BY66 1539 aa10.5□□□□□ -0.73
C11orf88-203ENST00000529167 ZFP91Q96JP5 570 aaPredicted RBP10.5□□□□□ -0.73
C11orf88-203ENST00000529167 SIN3AQ96ST3 1273 aa10.5□□□□□ -0.73
C11orf88-203ENST00000529167 PNNQ9H307 717 aaKnown RBP10.5□□□□□ -0.73
C11orf88-203ENST00000529167 UGGT1Q9NYU2 1555 aa10.5□□□□□ -0.73
C11orf88-203ENST00000529167 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.5□□□□□ -0.73
C11orf88-203ENST00000529167 RGS3P49796 1198 aa10.49□□□□□ -0.73
C11orf88-203ENST00000529167 GPATCH8Q9UKJ3 1502 aaKnown RBP10.49□□□□□ -0.73
C11orf88-203ENST00000529167 THEMISQ8N1K5 641 aaPredicted RBP10.49□□□□□ -0.73
C11orf88-203ENST00000529167 RAB3GAP2Q9H2M9 1393 aa10.49□□□□□ -0.73
C11orf88-203ENST00000529167 MIA2Q96PC5 1412 aa10.48□□□□□ -0.73
C11orf88-203ENST00000529167 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.48□□□□□ -0.73
C11orf88-203ENST00000529167 IPO4Q8TEX9 1081 aaKnown RBP10.48□□□□□ -0.73
C11orf88-203ENST00000529167 STAC3Q96MF2 364 aa10.48□□□□□ -0.73
C11orf88-203ENST00000529167 RTEL1-TNFRSF6BF6WH68 1400 aa10.48□□□□□ -0.73
C11orf88-203ENST00000529167 KDM2AQ9Y2K7 1162 aa10.47□□□□□ -0.73
C11orf88-203ENST00000529167 GGT6Q6P531 493 aa10.47□□□□□ -0.73
C11orf88-203ENST00000529167 CASKIN1Q8WXD9 1431 aa10.47□□□□□ -0.73
C11orf88-203ENST00000529167 L1TD1Q5T7N2 865 aaKnown RBP10.47□□□□□ -0.73
C11orf88-203ENST00000529167 C14orf37Q86TY3 774 aa10.46□□□□□ -0.73
C11orf88-203ENST00000529167 DHX29Q7Z478 1369 aaKnown RBP10.45□□□□□ -0.74
C11orf88-203ENST00000529167 CCNB3Q8WWL7 1395 aa10.45□□□□□ -0.74
C11orf88-203ENST00000529167 UPF1Q92900 1129 aaKnown RBP eCLIP10.45□□□□□ -0.74
C11orf88-203ENST00000529167 ZNF326Q5BKZ1 582 aaKnown RBP10.44□□□□□ -0.74
C11orf88-203ENST00000529167 FBXO31Q5XUX0 539 aaPredicted RBP10.44□□□□□ -0.74
C11orf88-203ENST00000529167 ATP1B4Q9UN42 357 aaPredicted RBP10.44□□□□□ -0.74
C11orf88-203ENST00000529167 HNRNPMP52272 730 aaKnown RBP eCLIP10.44□□□□□ -0.74
C11orf88-203ENST00000529167 NCOA2Q15596 1464 aa10.44□□□□□ -0.74
C11orf88-203ENST00000529167 LRRC9Q6ZRR7 1453 aa10.44□□□□□ -0.74
C11orf88-203ENST00000529167 TPM2P07951 284 aa10.44□□□□□ -0.74
C11orf88-203ENST00000529167 ROBO1Q9Y6N7 1651 aa10.43□□□□□ -0.74
C11orf88-203ENST00000529167 HIRIP3Q9BW71 556 aaPredicted RBP10.43□□□□□ -0.74
C11orf88-203ENST00000529167 FRAT2O75474 233 aaPredicted RBP10.43□□□□□ -0.74
C11orf88-203ENST00000529167 SECISBP2LQ93073 1101 aaKnown RBP10.43□□□□□ -0.74
C11orf88-203ENST00000529167 ARHGAP23Q9P227 1491 aa10.43□□□□□ -0.74
C11orf88-203ENST00000529167 MBD5Q9P267 1494 aa10.43□□□□□ -0.74
C11orf88-203ENST00000529167 NUDCQ9Y266 331 aa10.42□□□□□ -0.74
C11orf88-203ENST00000529167 SETD5Q9C0A6 1442 aa10.42□□□□□ -0.74
C11orf88-203ENST00000529167 SLIT1O75093 1534 aa10.42□□□□□ -0.74
C11orf88-203ENST00000529167 UBR1Q8IWV7 1749 aa10.42□□□□□ -0.74
C11orf88-203ENST00000529167 CDK12Q9NYV4 1490 aaPredicted RBP10.41□□□□□ -0.74
C11orf88-203ENST00000529167 SCAF11Q99590 1463 aaKnown RBP10.41□□□□□ -0.74
C11orf88-203ENST00000529167 CCDC184Q52MB2 194 aa10.41□□□□□ -0.74
C11orf88-203ENST00000529167 MAP3K1Q13233 1512 aa10.41□□□□□ -0.74
C11orf88-203ENST00000529167 FYCO1Q9BQS8 1478 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms