RNA–Protein interactions for RNA: ENST00000529045.1

PTPN22-208, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 4

Gene PTPN22, Length 527 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-208ENST00000529045 AK7Q96M32 723 aa10.91□□□□□ -0.66
PTPN22-208ENST00000529045 ZNF316A6NFI3 1004 aaPredicted RBP10.9□□□□□ -0.66
PTPN22-208ENST00000529045 GLI2P10070 1586 aa10.9□□□□□ -0.67
PTPN22-208ENST00000529045 PPRC1Q5VV67 1664 aaKnown RBP10.89□□□□□ -0.67
PTPN22-208ENST00000529045 GPBP1L1Q9HC44 474 aaPredicted RBP10.89□□□□□ -0.67
PTPN22-208ENST00000529045 FAM9AQ8IZU1 332 aaPredicted RBP10.88□□□□□ -0.67
PTPN22-208ENST00000529045 NUDT7P0C024 238 aa10.87□□□□□ -0.67
PTPN22-208ENST00000529045 OXER1Q8TDS5 423 aa10.87□□□□□ -0.67
PTPN22-208ENST00000529045 TNIKQ9UKE5 1360 aa10.87□□□□□ -0.67
PTPN22-208ENST00000529045 UPF1Q92900 1129 aaKnown RBP eCLIP10.86□□□□□ -0.67
PTPN22-208ENST00000529045 LMTK3Q96Q04 1460 aa10.86□□□□□ -0.67
PTPN22-208ENST00000529045 GRXCR2A6NFK2 248 aa10.85□□□□□ -0.67
PTPN22-208ENST00000529045 TRIM66O15016 1216 aa10.85□□□□□ -0.67
PTPN22-208ENST00000529045 MAP3K9P80192 1104 aa10.85□□□□□ -0.67
PTPN22-208ENST00000529045 KRI1Q8N9T8 703 aaKnown RBP10.85□□□□□ -0.67
PTPN22-208ENST00000529045 PCDHGA4Q9Y5G9 962 aa10.85□□□□□ -0.67
PTPN22-208ENST00000529045 SLC34A2O95436 690 aa10.84□□□□□ -0.67
PTPN22-208ENST00000529045 OSBPP22059 807 aa10.84□□□□□ -0.67
PTPN22-208ENST00000529045 ZNF687Q8N1G0 1237 aa10.84□□□□□ -0.67
PTPN22-208ENST00000529045 TEX14Q8IWB6 1497 aa10.83□□□□□ -0.68
PTPN22-208ENST00000529045 ERICH6Q7L0X2 663 aa10.83□□□□□ -0.68
PTPN22-208ENST00000529045 CEP162Q5TB80 1403 aa10.83□□□□□ -0.68
PTPN22-208ENST00000529045 PRIM1P49642 420 aaKnown RBP10.82□□□□□ -0.68
PTPN22-208ENST00000529045 JPH4Q96JJ6 628 aa10.82□□□□□ -0.68
PTPN22-208ENST00000529045 BIVM-ERCC5R4GMW8 1640 aa10.82□□□□□ -0.68
PTPN22-208ENST00000529045 PLB1Q6P1J6 1458 aa10.81□□□□□ -0.68
PTPN22-208ENST00000529045 MAP3K4Q9Y6R4 1608 aa10.81□□□□□ -0.68
PTPN22-208ENST00000529045 PTGER2P43116 358 aa10.81□□□□□ -0.68
PTPN22-208ENST00000529045 PDE4DQ08499 809 aa10.81□□□□□ -0.68
PTPN22-208ENST00000529045 KDM4CQ9H3R0 1056 aa10.81□□□□□ -0.68
PTPN22-208ENST00000529045 C14orf37Q86TY3 774 aa10.8□□□□□ -0.68
PTPN22-208ENST00000529045 LHX6Q9UPM6 363 aa10.79□□□□□ -0.68
PTPN22-208ENST00000529045 ABCC2Q92887 1545 aa10.79□□□□□ -0.68
PTPN22-208ENST00000529045 DDX12PQ92771 950 aa10.78□□□□□ -0.68
PTPN22-208ENST00000529045 KIAA0586Q9BVV6 1533 aa10.78□□□□□ -0.68
PTPN22-208ENST00000529045 NUTM2FA1L443 756 aa10.77□□□□□ -0.69
PTPN22-208ENST00000529045 FECHP22830 423 aa10.76□□□□□ -0.69
PTPN22-208ENST00000529045 MAP2K5Q13163 448 aa10.76□□□□□ -0.69
PTPN22-208ENST00000529045 CCDC102AQ96A19 550 aa10.76□□□□□ -0.69
PTPN22-208ENST00000529045 SOCS7O14512 581 aa10.75□□□□□ -0.69
PTPN22-208ENST00000529045 EVI5O60447 810 aa10.75□□□□□ -0.69
PTPN22-208ENST00000529045 MINK1Q8N4C8 1332 aaPredicted RBP10.75□□□□□ -0.69
PTPN22-208ENST00000529045 CUL7Q14999 1698 aa10.75□□□□□ -0.69
PTPN22-208ENST00000529045 GOLGA3Q08378 1498 aa10.74□□□□□ -0.69
PTPN22-208ENST00000529045 IL27Q8NEV9 243 aa10.74□□□□□ -0.69
PTPN22-208ENST00000529045 PTCD2Q8WV60 388 aaKnown RBP10.74□□□□□ -0.69
PTPN22-208ENST00000529045 ASXL2Q76L83 1435 aa10.74□□□□□ -0.69
PTPN22-208ENST00000529045 GNPATO15228 680 aa10.73□□□□□ -0.69
PTPN22-208ENST00000529045 ANKRD13DQ6ZTN6 518 aa10.73□□□□□ -0.69
PTPN22-208ENST00000529045 UHRF1BP1LA0JNW5 1464 aa10.73□□□□□ -0.69
PTPN22-208ENST00000529045 IRF6O14896 467 aa10.72□□□□□ -0.69
PTPN22-208ENST00000529045 COL17A1Q9UMD9 1497 aaPredicted RBP10.72□□□□□ -0.69
PTPN22-208ENST00000529045 KIF21BO75037 1637 aa10.72□□□□□ -0.69
PTPN22-208ENST00000529045 TBC1D12O60347 775 aa10.71□□□□□ -0.69
PTPN22-208ENST00000529045 HIC1Q14526 733 aa10.71□□□□□ -0.69
PTPN22-208ENST00000529045 AXIN2Q9Y2T1 843 aa10.71□□□□□ -0.69
PTPN22-208ENST00000529045 PTGDRQ13258 359 aa10.7□□□□□ -0.7
PTPN22-208ENST00000529045 AMHR2Q16671 573 aa10.7□□□□□ -0.7
PTPN22-208ENST00000529045 POTEEQ6S8J3 1075 aa10.7□□□□□ -0.7
PTPN22-208ENST00000529045 EPRSP07814 1512 aaKnown RBP10.69□□□□□ -0.7
PTPN22-208ENST00000529045 FCHSD2O94868 740 aa10.69□□□□□ -0.7
PTPN22-208ENST00000529045 FAM117AQ9C073 453 aa10.69□□□□□ -0.7
PTPN22-208ENST00000529045 ANO8Q9HCE9 1232 aaPredicted RBP10.69□□□□□ -0.7
PTPN22-208ENST00000529045 PCF11O94913 1555 aaKnown RBP10.69□□□□□ -0.7
PTPN22-208ENST00000529045 PTPRGP23470 1445 aa10.68□□□□□ -0.7
PTPN22-208ENST00000529045 LSM11P83369 360 aaKnown RBP eCLIP10.68□□□□□ -0.7
PTPN22-208ENST00000529045 PARP9Q8IXQ6 854 aa10.68□□□□□ -0.7
PTPN22-208ENST00000529045 CFAP43Q8NDM7 1665 aa10.68□□□□□ -0.7
PTPN22-208ENST00000529045 CARMIL2Q6F5E8 1435 aa10.67□□□□□ -0.7
PTPN22-208ENST00000529045 ADAMTSL3P82987 1691 aa10.66□□□□□ -0.7
PTPN22-208ENST00000529045 PLEKHG3A1L390 1219 aa10.66□□□□□ -0.7
PTPN22-208ENST00000529045 RNF166Q96A37 237 aaPredicted RBP10.66□□□□□ -0.7
PTPN22-208ENST00000529045 CDHR5Q9HBB8 845 aa10.66□□□□□ -0.7
PTPN22-208ENST00000529045 MYT1LQ9UL68 1186 aa10.66□□□□□ -0.7
PTPN22-208ENST00000529045 KDM5BQ9UGL1 1544 aa10.66□□□□□ -0.7
PTPN22-208ENST00000529045 SPATA31D1Q6ZQQ2 1576 aa10.65□□□□□ -0.71
PTPN22-208ENST00000529045 MAGI3Q5TCQ9 1506 aa10.64□□□□□ -0.71
PTPN22-208ENST00000529045 PTPRMP28827 1452 aa10.64□□□□□ -0.71
PTPN22-208ENST00000529045 PBX2P40425 430 aa10.64□□□□□ -0.71
PTPN22-208ENST00000529045 DAXXQ9UER7 740 aaPredicted RBP10.64□□□□□ -0.71
PTPN22-208ENST00000529045 ZCCHC11Q5TAX3 1644 aaKnown RBP10.64□□□□□ -0.71
PTPN22-208ENST00000529045 EN1Q05925 392 aaPredicted RBP10.63□□□□□ -0.71
PTPN22-208ENST00000529045 NPDC1Q9NQX5 325 aaPredicted RBP10.63□□□□□ -0.71
PTPN22-208ENST00000529045 DISP3Q9P2K9 1392 aa10.63□□□□□ -0.71
PTPN22-208ENST00000529045 VPS8Q8N3P4 1428 aa10.62□□□□□ -0.71
PTPN22-208ENST00000529045 UACAQ9BZF9 1416 aa10.62□□□□□ -0.71
PTPN22-208ENST00000529045 PSDA5PKW4 1024 aaPredicted RBP10.62□□□□□ -0.71
PTPN22-208ENST00000529045 PHF14O94880 888 aa10.61□□□□□ -0.71
PTPN22-208ENST00000529045 PCDHGA10Q9Y5H3 936 aa10.6□□□□□ -0.71
PTPN22-208ENST00000529045 WDR7Q9Y4E6 1490 aa10.6□□□□□ -0.71
PTPN22-208ENST00000529045 IQGAP2Q13576 1575 aa10.6□□□□□ -0.71
PTPN22-208ENST00000529045 BCORL1Q5H9F3 1711 aa10.59□□□□□ -0.71
PTPN22-208ENST00000529045 ARHGAP33O14559 1287 aa10.59□□□□□ -0.71
PTPN22-208ENST00000529045 PSEN2P49810 448 aa10.59□□□□□ -0.71
PTPN22-208ENST00000529045 TSR1Q2NL82 804 aaKnown RBP10.58□□□□□ -0.72
PTPN22-208ENST00000529045 PPP4R3BQ5MIZ7 849 aa10.58□□□□□ -0.72
PTPN22-208ENST00000529045 DDRGK1Q96HY6 314 aa10.58□□□□□ -0.72
PTPN22-208ENST00000529045 YTHDC1Q96MU7 727 aaKnown RBP10.58□□□□□ -0.72
PTPN22-208ENST00000529045 REPIN1Q9BWE0 567 aaKnown RBP10.58□□□□□ -0.72
PTPN22-208ENST00000529045 ARAP3Q8WWN8 1544 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms